RNA–Protein interactions for RNA: ENST00000479615.5

PRKN-207, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene PRKN, Length 904 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-207ENST00000479615 UEVLDQ8IX04 471 aa13.16□□□□□ -0.3
PRKN-207ENST00000479615 IL17RDQ8NFM7 739 aa13.16□□□□□ -0.3
PRKN-207ENST00000479615 SLC26A7Q8TE54 656 aa13.16□□□□□ -0.3
PRKN-207ENST00000479615 BCL2L2Q92843 193 aaPredicted RBP13.16□□□□□ -0.3
PRKN-207ENST00000479615 ALKBH3Q96Q83 286 aaPredicted RBP13.16□□□□□ -0.3
PRKN-207ENST00000479615 SLC38A2Q96QD8 506 aa13.16□□□□□ -0.3
PRKN-207ENST00000479615 MCHR1Q99705 422 aa13.16□□□□□ -0.3
PRKN-207ENST00000479615 C1QTNF6Q9BXI9 259 aa13.16□□□□□ -0.3
PRKN-207ENST00000479615 CACNG6Q9BXT2 260 aa13.16□□□□□ -0.3
PRKN-207ENST00000479615 REG4Q9BYZ8 158 aa13.16□□□□□ -0.3
PRKN-207ENST00000479615 B3GAT2Q9NPZ5 323 aa13.16□□□□□ -0.3
PRKN-207ENST00000479615 MRPL39Q9NYK5 338 aaKnown RBP13.16□□□□□ -0.3
PRKN-207ENST00000479615 B3GAT1Q9P2W7 334 aa13.16□□□□□ -0.3
PRKN-207ENST00000479615 CRNNQ9UBG3 495 aaPredicted RBP13.16□□□□□ -0.3
PRKN-207ENST00000479615 BBIP1A8MTZ0 92 aa13.15□□□□□ -0.3
PRKN-207ENST00000479615 CHP2O43745 196 aa13.15□□□□□ -0.3
PRKN-207ENST00000479615 UPK3AO75631 287 aa13.15□□□□□ -0.3
PRKN-207ENST00000479615 PDE5AO76074 875 aa13.15□□□□□ -0.3
PRKN-207ENST00000479615 IFNA14P01570 189 aa13.15□□□□□ -0.3
PRKN-207ENST00000479615 TP53P04637 393 aaPredicted RBP13.15□□□□□ -0.3
PRKN-207ENST00000479615 CSF3P09919 207 aa13.15□□□□□ -0.3
PRKN-207ENST00000479615 ACVR1BP36896 505 aa13.15□□□□□ -0.3
PRKN-207ENST00000479615 NUDT6P53370 316 aa13.15□□□□□ -0.3
PRKN-207ENST00000479615 CDH12P55289 794 aa13.15□□□□□ -0.3
PRKN-207ENST00000479615 MTPNP58546 118 aa13.15□□□□□ -0.3
PRKN-207ENST00000479615 IL1RL1Q01638 556 aa13.15□□□□□ -0.3
PRKN-207ENST00000479615 PMS2P3Q13401 168 aa13.15□□□□□ -0.3
PRKN-207ENST00000479615 TRMT5Q32P41 509 aaKnown RBP13.15□□□□□ -0.3
PRKN-207ENST00000479615 HIKESHIQ53FT3 197 aa13.15□□□□□ -0.3
PRKN-207ENST00000479615 LINC00114Q6XXX2 140 aa13.15□□□□□ -0.3
PRKN-207ENST00000479615 PXKQ7Z7A4 578 aa13.15□□□□□ -0.3
PRKN-207ENST00000479615 RETREG3Q86VR2 466 aa13.15□□□□□ -0.3
PRKN-207ENST00000479615 KDM8Q8N371 416 aa13.15□□□□□ -0.3
PRKN-207ENST00000479615 OR4F15Q8NGB8 312 aa13.15□□□□□ -0.3
PRKN-207ENST00000479615 OR8J3Q8NGG0 315 aa13.15□□□□□ -0.3
PRKN-207ENST00000479615 MPP4Q96JB8 637 aa13.15□□□□□ -0.3
PRKN-207ENST00000479615 ARHGDIGQ99819 225 aa13.15□□□□□ -0.3
PRKN-207ENST00000479615 RSPO3Q9BXY4 272 aaPredicted RBP13.15□□□□□ -0.3
PRKN-207ENST00000479615 SLC19A3Q9BZV2 496 aa13.15□□□□□ -0.3
PRKN-207ENST00000479615 HIVEP2P31629 2446 aa13.15□□□□□ -0.3
PRKN-207ENST00000479615 ABCA2Q9BZC7 2435 aa13.14□□□□□ -0.31
PRKN-207ENST00000479615 ENTPD5O75356 428 aa13.14□□□□□ -0.31
PRKN-207ENST00000479615 IGKV3-15P01624 115 aa13.14□□□□□ -0.31
PRKN-207ENST00000479615 CBR1P16152 277 aa13.14□□□□□ -0.31
PRKN-207ENST00000479615 PCGF2P35227 344 aa13.14□□□□□ -0.31
PRKN-207ENST00000479615 ARR3P36575 388 aa13.14□□□□□ -0.31
PRKN-207ENST00000479615 SLC25A3Q00325 362 aa13.14□□□□□ -0.31
PRKN-207ENST00000479615 PUDPQ08623 228 aa13.14□□□□□ -0.31
PRKN-207ENST00000479615 SPOCK1Q08629 439 aa13.14□□□□□ -0.31
PRKN-207ENST00000479615 DUSP7Q16829 419 aa13.14□□□□□ -0.31
PRKN-207ENST00000479615 VMACQ2NL98 169 aa13.14□□□□□ -0.31
PRKN-207ENST00000479615 MMEL1Q495T6 779 aa13.14□□□□□ -0.31
PRKN-207ENST00000479615 ERICH5Q6P6B1 374 aa13.14□□□□□ -0.31
PRKN-207ENST00000479615 CLEC2AQ6UVW9 174 aa13.14□□□□□ -0.31
PRKN-207ENST00000479615 CCDC80Q76M96 950 aa13.14□□□□□ -0.31
PRKN-207ENST00000479615 COMTD1Q86VU5 262 aa13.14□□□□□ -0.31
PRKN-207ENST00000479615 SMYD1Q8NB12 490 aa13.14□□□□□ -0.31
PRKN-207ENST00000479615 PCYOX1LQ8NBM8 494 aa13.14□□□□□ -0.31
PRKN-207ENST00000479615 OR10A6Q8NH74 314 aa13.14□□□□□ -0.31
PRKN-207ENST00000479615 THOC1Q96FV9 657 aaKnown RBP13.14□□□□□ -0.31
PRKN-207ENST00000479615 OR2M2Q96R28 347 aa13.14□□□□□ -0.31
PRKN-207ENST00000479615 TMEM120AQ9BXJ8 343 aa13.14□□□□□ -0.31
PRKN-207ENST00000479615 POLR2J2Q9GZM3 115 aaKnown RBP13.14□□□□□ -0.31
PRKN-207ENST00000479615 PCDHAC1Q9H158 963 aa13.14□□□□□ -0.31
PRKN-207ENST00000479615 POLR2J3Q9H1A7 115 aaKnown RBP13.14□□□□□ -0.31
PRKN-207ENST00000479615 DENND2DQ9H6A0 471 aaPredicted RBP13.14□□□□□ -0.31
PRKN-207ENST00000479615 CRLF2Q9HC73 371 aa13.14□□□□□ -0.31
PRKN-207ENST00000479615 GPR35Q9HC97 309 aa13.14□□□□□ -0.31
PRKN-207ENST00000479615 NAV3Q8IVL0 2385 aa13.14□□□□□ -0.31
PRKN-207ENST00000479615 IGHV1-18A0A0C4DH31 117 aa13.13□□□□□ -0.31
PRKN-207ENST00000479615 TRAPPC13A5PLN9 417 aa13.13□□□□□ -0.31
PRKN-207ENST00000479615 ZNF726A6NNF4 738 aa13.13□□□□□ -0.31
PRKN-207ENST00000479615 ZNF99A8MXY4 864 aaPredicted RBP13.13□□□□□ -0.31
PRKN-207ENST00000479615 RNF223E7ERA6 249 aa13.13□□□□□ -0.31
PRKN-207ENST00000479615 MS4A18H0YCH9 400 aa13.13□□□□□ -0.31
PRKN-207ENST00000479615 TRAF3IP2O43734 574 aaPredicted RBP13.13□□□□□ -0.31
PRKN-207ENST00000479615 TLX2O43763 284 aaPredicted RBP13.13□□□□□ -0.31
PRKN-207ENST00000479615 SSX4O60224 188 aa13.13□□□□□ -0.31
PRKN-207ENST00000479615 TPST2O60704 377 aa13.13□□□□□ -0.31
PRKN-207ENST00000479615 SASH3O75995 380 aa13.13□□□□□ -0.31
PRKN-207ENST00000479615 OR6A2O95222 327 aa13.13□□□□□ -0.31
PRKN-207ENST00000479615 IGLV1-44P01699 117 aa13.13□□□□□ -0.31
PRKN-207ENST00000479615 BGLAPP02818 100 aa13.13□□□□□ -0.31
PRKN-207ENST00000479615 EFNA4P52798 201 aa13.13□□□□□ -0.31
PRKN-207ENST00000479615 ARFIP2P53365 341 aa13.13□□□□□ -0.31
PRKN-207ENST00000479615 MS4A18Q3C1V0 323 aa13.13□□□□□ -0.31
PRKN-207ENST00000479615 NANOGP8Q6NSW7 305 aa13.13□□□□□ -0.31
PRKN-207ENST00000479615 TTC33Q6PID6 262 aaPredicted RBP13.13□□□□□ -0.31
PRKN-207ENST00000479615 B3GLCTQ6Y288 498 aa13.13□□□□□ -0.31
PRKN-207ENST00000479615 TMEM123Q8N131 208 aa13.13□□□□□ -0.31
PRKN-207ENST00000479615 C10orf53Q8N6V4 93 aa13.13□□□□□ -0.31
PRKN-207ENST00000479615 OR5J2Q8NH18 312 aa13.13□□□□□ -0.31
PRKN-207ENST00000479615 ECSITQ9BQ95 431 aa13.13□□□□□ -0.31
PRKN-207ENST00000479615 PRR14Q9BWN1 585 aa13.13□□□□□ -0.31
PRKN-207ENST00000479615 NANOGQ9H9S0 305 aa13.13□□□□□ -0.31
PRKN-207ENST00000479615 GID8Q9NWU2 228 aa13.13□□□□□ -0.31
PRKN-207ENST00000479615 GDF2Q9UK05 429 aaPredicted RBP13.13□□□□□ -0.31
PRKN-207ENST00000479615 BAG5Q9UL15 447 aa13.13□□□□□ -0.31
PRKN-207ENST00000479615 USP22Q9UPT9 525 aa13.13□□□□□ -0.31
PRKN-207ENST00000479615 MOKQ9UQ07 419 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms