RNA–Protein interactions for RNA: ENST00000479177.1

USP48-208, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-208ENST00000479177 RFPL3SP0C7P2 107 aa5.98□□□□□ -1.45
USP48-208ENST00000479177 OSMP13725 252 aa5.98□□□□□ -1.45
USP48-208ENST00000479177 FUT1P19526 365 aa5.98□□□□□ -1.45
USP48-208ENST00000479177 CCNA2P20248 432 aa5.98□□□□□ -1.45
USP48-208ENST00000479177 MYF6P23409 242 aa5.98□□□□□ -1.45
USP48-208ENST00000479177 CHMP24386 653 aa5.98□□□□□ -1.45
USP48-208ENST00000479177 GDF1P27539 372 aa5.98□□□□□ -1.45
USP48-208ENST00000479177 GGT2P36268 569 aa5.98□□□□□ -1.45
USP48-208ENST00000479177 MEOX1P50221 254 aa5.98□□□□□ -1.45
USP48-208ENST00000479177 MAP2K6P52564 334 aa5.98□□□□□ -1.45
USP48-208ENST00000479177 CRISP1P54107 249 aa5.98□□□□□ -1.45
USP48-208ENST00000479177 FXYD6P3P58550 94 aa5.98□□□□□ -1.45
USP48-208ENST00000479177 B3GALT5-AS1P59052 145 aa5.98□□□□□ -1.45
USP48-208ENST00000479177 ESRRGP62508 458 aa5.98□□□□□ -1.45
USP48-208ENST00000479177 RPS4XP62701 263 aaKnown RBP5.98□□□□□ -1.45
USP48-208ENST00000479177 SELENBP1Q13228 472 aa5.98□□□□□ -1.45
USP48-208ENST00000479177 FHL1Q13642 323 aa5.98□□□□□ -1.45
USP48-208ENST00000479177 ZNF74Q16587 644 aa5.98□□□□□ -1.45
USP48-208ENST00000479177 TBR1Q16650 682 aa5.98□□□□□ -1.45
USP48-208ENST00000479177 HYAL4Q2M3T9 481 aa5.98□□□□□ -1.45
USP48-208ENST00000479177 GLYR1Q49A26 553 aaPredicted RBP5.98□□□□□ -1.45
USP48-208ENST00000479177 FAM209AQ5JX71 171 aa5.98□□□□□ -1.45
USP48-208ENST00000479177 C1orf140Q5VVS0 124 aa5.98□□□□□ -1.45
USP48-208ENST00000479177 C1QL3Q5VWW1 255 aa5.98□□□□□ -1.45
USP48-208ENST00000479177 RAET1LQ5VY80 246 aa5.98□□□□□ -1.45
USP48-208ENST00000479177 TTC23Q5W5X9 447 aa5.98□□□□□ -1.45
USP48-208ENST00000479177 C3orf33Q6P1S2 294 aa5.98□□□□□ -1.45
USP48-208ENST00000479177 C5orf46Q6UWT4 87 aa5.98□□□□□ -1.45
USP48-208ENST00000479177 IGFL3Q6UXB1 125 aa5.98□□□□□ -1.45
USP48-208ENST00000479177 Q6ZPB1 254 aaPredicted RBP5.98□□□□□ -1.45
USP48-208ENST00000479177 CLDN22Q8N7P3 220 aa5.98□□□□□ -1.45
USP48-208ENST00000479177 ZFP62Q8NB50 900 aaPredicted RBP5.98□□□□□ -1.45
USP48-208ENST00000479177 FAM83FQ8NEG4 500 aaPredicted RBP5.98□□□□□ -1.45
USP48-208ENST00000479177 OR6S1Q8NH40 331 aa5.98□□□□□ -1.45
USP48-208ENST00000479177 SLC25A43Q8WUT9 341 aaPredicted RBP5.98□□□□□ -1.45
USP48-208ENST00000479177 LIPHQ8WWY8 451 aa5.98□□□□□ -1.45
USP48-208ENST00000479177 TM9SF4Q92544 642 aa5.98□□□□□ -1.45
USP48-208ENST00000479177 DTNBP1Q96EV8 351 aa5.98□□□□□ -1.45
USP48-208ENST00000479177 ZNF570Q96NI8 536 aa5.98□□□□□ -1.45
USP48-208ENST00000479177 TTTY12Q9BZ98 90 aa5.98□□□□□ -1.45
USP48-208ENST00000479177 PLA2G12AQ9BZM1 189 aa5.98□□□□□ -1.45
USP48-208ENST00000479177 OR11A1Q9GZK7 315 aa5.98□□□□□ -1.45
USP48-208ENST00000479177 CDIP1Q9H305 208 aa5.98□□□□□ -1.45
USP48-208ENST00000479177 Q9H521 79 aa5.98□□□□□ -1.45
USP48-208ENST00000479177 EGLN3Q9H6Z9 239 aa5.98□□□□□ -1.45
USP48-208ENST00000479177 SLC25A19Q9HC21 320 aa5.98□□□□□ -1.45
USP48-208ENST00000479177 MCCC2Q9HCC0 563 aa5.98□□□□□ -1.45
USP48-208ENST00000479177 B4GALT7Q9UBV7 327 aa5.98□□□□□ -1.45
USP48-208ENST00000479177 NDRG4Q9ULP0 352 aaKnown RBP5.98□□□□□ -1.45
USP48-208ENST00000479177 SIGLEC7Q9Y286 467 aa5.98□□□□□ -1.45
USP48-208ENST00000479177 LRCH1Q9Y2L9 728 aa5.98□□□□□ -1.45
USP48-208ENST00000479177 MRPS18CQ9Y3D5 142 aaKnown RBP5.98□□□□□ -1.45
USP48-208ENST00000479177 ALPK2Q86TB3 2170 aa5.98□□□□□ -1.45
USP48-208ENST00000479177 IGSF10Q6WRI0 2623 aa5.98□□□□□ -1.45
USP48-208ENST00000479177 CFAP46Q8IYW2 2715 aa5.97□□□□□ -1.45
USP48-208ENST00000479177 TRAV27A0A087WT01 109 aa5.97□□□□□ -1.45
USP48-208ENST00000479177 TRAV20A0A0B4J274 112 aa5.97□□□□□ -1.45
USP48-208ENST00000479177 LOC100130705A0A1B0GUX0 176 aa5.97□□□□□ -1.45
USP48-208ENST00000479177 TMEM8BA6NDV4 472 aa5.97□□□□□ -1.45
USP48-208ENST00000479177 FAM166BA8MTA8 275 aa5.97□□□□□ -1.45
USP48-208ENST00000479177 FTCDNL1E5RQL4 147 aa5.97□□□□□ -1.45
USP48-208ENST00000479177 LRRN3E7EW58 273 aa5.97□□□□□ -1.45
USP48-208ENST00000479177 MKRN2OSH3BPM6 223 aa5.97□□□□□ -1.45
USP48-208ENST00000479177 KLRC4-KLRK1H3BQV0 150 aa5.97□□□□□ -1.45
USP48-208ENST00000479177 HCN1O60741 890 aa5.97□□□□□ -1.45
USP48-208ENST00000479177 AHSA1O95433 338 aa5.97□□□□□ -1.45
USP48-208ENST00000479177 CLIC3O95833 236 aa5.97□□□□□ -1.45
USP48-208ENST00000479177 MT-ATP6P00846 226 aa5.97□□□□□ -1.45
USP48-208ENST00000479177 HPNP05981 417 aa5.97□□□□□ -1.45
USP48-208ENST00000479177 ASAH2BP0C7U1 165 aa5.97□□□□□ -1.45
USP48-208ENST00000479177 SAGP10523 405 aaPredicted RBP5.97□□□□□ -1.45
USP48-208ENST00000479177 PEPDP12955 493 aa5.97□□□□□ -1.45
USP48-208ENST00000479177 POU1F1P28069 291 aa5.97□□□□□ -1.45
USP48-208ENST00000479177 SHC1P29353 583 aa5.97□□□□□ -1.45
USP48-208ENST00000479177 RFC3P40938 356 aa5.97□□□□□ -1.45
USP48-208ENST00000479177 RPS5P46782 204 aaKnown RBP5.97□□□□□ -1.45
USP48-208ENST00000479177 SLC9A3P48764 834 aa5.97□□□□□ -1.45
USP48-208ENST00000479177 PLGLB1Q02325 96 aa5.97□□□□□ -1.45
USP48-208ENST00000479177 LTBQ06643 244 aa5.97□□□□□ -1.45
USP48-208ENST00000479177 IL18R1Q13478 541 aa5.97□□□□□ -1.45
USP48-208ENST00000479177 KEAP1Q14145 624 aa5.97□□□□□ -1.45
USP48-208ENST00000479177 GXYLT1Q4G148 440 aa5.97□□□□□ -1.45
USP48-208ENST00000479177 SYT14P1Q58G82 188 aa5.97□□□□□ -1.45
USP48-208ENST00000479177 FAM69AQ5T7M9 428 aa5.97□□□□□ -1.45
USP48-208ENST00000479177 ZNF691Q5VV52 312 aa5.97□□□□□ -1.45
USP48-208ENST00000479177 SLX4IPQ5VYV7 408 aa5.97□□□□□ -1.45
USP48-208ENST00000479177 C12orf73Q69YU5 71 aa5.97□□□□□ -1.45
USP48-208ENST00000479177 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.97□□□□□ -1.45
USP48-208ENST00000479177 YRDCQ86U90 279 aaKnown RBP5.97□□□□□ -1.45
USP48-208ENST00000479177 CCDC71Q8IV32 467 aaPredicted RBP5.97□□□□□ -1.45
USP48-208ENST00000479177 CDK20Q8IZL9 346 aa5.97□□□□□ -1.45
USP48-208ENST00000479177 Q8N1Y9 231 aa5.97□□□□□ -1.45
USP48-208ENST00000479177 ZADH2Q8N4Q0 377 aa5.97□□□□□ -1.45
USP48-208ENST00000479177 MARVELD2Q8N4S9 558 aa5.97□□□□□ -1.45
USP48-208ENST00000479177 TMEM251Q8N6I4 163 aa5.97□□□□□ -1.45
USP48-208ENST00000479177 IQCF1Q8N6M8 205 aa5.97□□□□□ -1.45
USP48-208ENST00000479177 LRRC17Q8N6Y2 441 aa5.97□□□□□ -1.45
USP48-208ENST00000479177 ZNF555Q8NEP9 628 aa5.97□□□□□ -1.45
USP48-208ENST00000479177 OR5M1Q8NGP8 315 aa5.97□□□□□ -1.45
USP48-208ENST00000479177 OR14L1PQ8NHC6 308 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms