RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 GLYR1Q49A26 553 aaPredicted RBP12.86□□□□□ -0.35
USP11-207ENST00000478596 SWT1Q5T5J6 900 aaKnown RBP12.86□□□□□ -0.35
USP11-207ENST00000478596 TTC33Q6PID6 262 aaPredicted RBP12.86□□□□□ -0.35
USP11-207ENST00000478596 CHMP1BQ7LBR1 199 aa12.86□□□□□ -0.35
USP11-207ENST00000478596 LSMEM1Q8N8F7 131 aa12.86□□□□□ -0.35
USP11-207ENST00000478596 PIK3C3Q8NEB9 887 aa12.86□□□□□ -0.35
USP11-207ENST00000478596 OR52J3Q8NH60 311 aa12.86□□□□□ -0.35
USP11-207ENST00000478596 SLC25A43Q8WUT9 341 aaPredicted RBP12.86□□□□□ -0.35
USP11-207ENST00000478596 DNAJA3Q96EY1 480 aa12.86□□□□□ -0.35
USP11-207ENST00000478596 TNFRSF13CQ96RJ3 184 aa12.86□□□□□ -0.35
USP11-207ENST00000478596 KRCC1Q9NPI7 259 aaPredicted RBP12.86□□□□□ -0.35
USP11-207ENST00000478596 OSGIN1Q9UJX0 560 aa12.86□□□□□ -0.35
USP11-207ENST00000478596 TMCC3Q9ULS5 477 aa12.86□□□□□ -0.35
USP11-207ENST00000478596 ZNF281Q9Y2X9 895 aa12.86□□□□□ -0.35
USP11-207ENST00000478596 NOTCH1P46531 2555 aa12.85□□□□□ -0.35
USP11-207ENST00000478596 LINC01387J3KSC0 135 aa12.85□□□□□ -0.35
USP11-207ENST00000478596 EIF1AYO14602 144 aaKnown RBP12.85□□□□□ -0.35
USP11-207ENST00000478596 ZIC3O60481 467 aa12.85□□□□□ -0.35
USP11-207ENST00000478596 DEAF1O75398 565 aaPredicted RBP12.85□□□□□ -0.35
USP11-207ENST00000478596 SMNDC1O75940 238 aaKnown RBP eCLIP12.85□□□□□ -0.35
USP11-207ENST00000478596 AHSA1O95433 338 aa12.85□□□□□ -0.35
USP11-207ENST00000478596 PLAUP00749 431 aa12.85□□□□□ -0.35
USP11-207ENST00000478596 OPN1LWP04000 364 aa12.85□□□□□ -0.35
USP11-207ENST00000478596 POU2F1P14859 743 aa12.85□□□□□ -0.35
USP11-207ENST00000478596 ADH6P28332 368 aa12.85□□□□□ -0.35
USP11-207ENST00000478596 PDSS1Q5T2R2 415 aa12.85□□□□□ -0.35
USP11-207ENST00000478596 OR2T5Q6IEZ7 315 aa12.85□□□□□ -0.35
USP11-207ENST00000478596 ZNF730Q6ZMV8 503 aa12.85□□□□□ -0.35
USP11-207ENST00000478596 OR2T29Q8NH02 315 aa12.85□□□□□ -0.35
USP11-207ENST00000478596 SLC38A4Q969I6 547 aa12.85□□□□□ -0.35
USP11-207ENST00000478596 MPP4Q96JB8 637 aa12.85□□□□□ -0.35
USP11-207ENST00000478596 C7orf34Q96L11 122 aa12.85□□□□□ -0.35
USP11-207ENST00000478596 OR5B2Q96R09 309 aa12.85□□□□□ -0.35
USP11-207ENST00000478596 EPYCQ99645 322 aa12.85□□□□□ -0.35
USP11-207ENST00000478596 NPAS1Q99742 590 aa12.85□□□□□ -0.35
USP11-207ENST00000478596 A4GNTQ9UNA3 340 aa12.85□□□□□ -0.35
USP11-207ENST00000478596 MRPS18CQ9Y3D5 142 aaKnown RBP12.85□□□□□ -0.35
USP11-207ENST00000478596 SAMHD1Q9Y3Z3 626 aaKnown RBP12.85□□□□□ -0.35
USP11-207ENST00000478596 TMEM72A0PK05 275 aa12.84□□□□□ -0.35
USP11-207ENST00000478596 TNFRSF11BO00300 401 aa12.84□□□□□ -0.35
USP11-207ENST00000478596 KRT36O76013 467 aa12.84□□□□□ -0.35
USP11-207ENST00000478596 BAG2O95816 211 aa12.84□□□□□ -0.35
USP11-207ENST00000478596 THBDP07204 575 aa12.84□□□□□ -0.35
USP11-207ENST00000478596 THRBP10828 461 aa12.84□□□□□ -0.35
USP11-207ENST00000478596 FASP25445 335 aa12.84□□□□□ -0.35
USP11-207ENST00000478596 MAGEA2P43356 314 aa12.84□□□□□ -0.35
USP11-207ENST00000478596 LOXL1Q08397 574 aaPredicted RBP12.84□□□□□ -0.35
USP11-207ENST00000478596 SYT14P1Q58G82 188 aa12.84□□□□□ -0.35
USP11-207ENST00000478596 SLC25A53Q5H9E4 307 aa12.84□□□□□ -0.35
USP11-207ENST00000478596 ADAM5Q6NVV9 412 aa12.84□□□□□ -0.35
USP11-207ENST00000478596 ATG4DQ86TL0 474 aaPredicted RBP12.84□□□□□ -0.35
USP11-207ENST00000478596 LILRA2Q8N149 483 aa12.84□□□□□ -0.35
USP11-207ENST00000478596 ARIH2OSQ8N7S6 290 aa12.84□□□□□ -0.35
USP11-207ENST00000478596 POC1BQ8TC44 478 aa12.84□□□□□ -0.35
USP11-207ENST00000478596 TMEM255BQ8WV15 326 aa12.84□□□□□ -0.35
USP11-207ENST00000478596 AKAP1Q92667 903 aaKnown RBP eCLIP12.84□□□□□ -0.35
USP11-207ENST00000478596 GTPBP3Q969Y2 492 aaKnown RBP12.84□□□□□ -0.35
USP11-207ENST00000478596 KLHL15Q96M94 604 aa12.84□□□□□ -0.35
USP11-207ENST00000478596 RHNO1Q9BSD3 238 aa12.84□□□□□ -0.35
USP11-207ENST00000478596 OR11A1Q9GZK7 315 aa12.84□□□□□ -0.35
USP11-207ENST00000478596 C12orf10Q9HB07 376 aa12.84□□□□□ -0.35
USP11-207ENST00000478596 BARX1Q9HBU1 254 aaPredicted RBP12.84□□□□□ -0.35
USP11-207ENST00000478596 KIF17Q9P2E2 1029 aa12.84□□□□□ -0.35
USP11-207ENST00000478596 PRDM4Q9UKN5 801 aa12.84□□□□□ -0.35
USP11-207ENST00000478596 AP4B1Q9Y6B7 739 aa12.84□□□□□ -0.35
USP11-207ENST00000478596 U3KQV3 271 aa12.84□□□□□ -0.35
USP11-207ENST00000478596 A8MVM7 634 aa12.83□□□□□ -0.36
USP11-207ENST00000478596 LMX1BO60663 402 aa12.83□□□□□ -0.36
USP11-207ENST00000478596 SOD3P08294 240 aa12.83□□□□□ -0.36
USP11-207ENST00000478596 DANCRP0C864 163 aa12.83□□□□□ -0.36
USP11-207ENST00000478596 IL11P20809 199 aa12.83□□□□□ -0.36
USP11-207ENST00000478596 STARP49675 285 aa12.83□□□□□ -0.36
USP11-207ENST00000478596 ARHGDIAP52565 204 aa12.83□□□□□ -0.36
USP11-207ENST00000478596 RPS3AP61247 264 aaKnown RBP12.83□□□□□ -0.36
USP11-207ENST00000478596 IL1RL1Q01638 556 aa12.83□□□□□ -0.36
USP11-207ENST00000478596 RCN1Q15293 331 aa12.83□□□□□ -0.36
USP11-207ENST00000478596 TMEM176BQ3YBM2 270 aaPredicted RBP12.83□□□□□ -0.36
USP11-207ENST00000478596 PIWIL3Q7Z3Z3 882 aaKnown RBP12.83□□□□□ -0.36
USP11-207ENST00000478596 TSPYL5Q86VY4 417 aaPredicted RBP12.83□□□□□ -0.36
USP11-207ENST00000478596 TMEM239Q8WW34 195 aa12.83□□□□□ -0.36
USP11-207ENST00000478596 SLCO4A1Q96BD0 722 aa12.83□□□□□ -0.36
USP11-207ENST00000478596 ZHX1-C8orf76Q96EF9 292 aa12.83□□□□□ -0.36
USP11-207ENST00000478596 TAPBPLQ9BX59 468 aa12.83□□□□□ -0.36
USP11-207ENST00000478596 KLHL4Q9C0H6 718 aa12.83□□□□□ -0.36
USP11-207ENST00000478596 NMNAT1Q9HAN9 279 aaPredicted RBP12.83□□□□□ -0.36
USP11-207ENST00000478596 ARMC1Q9NVT9 282 aa12.83□□□□□ -0.36
USP11-207ENST00000478596 RRP15Q9Y3B9 282 aaKnown RBP12.83□□□□□ -0.36
USP11-207ENST00000478596 MED31Q9Y3C7 131 aa12.83□□□□□ -0.36
USP11-207ENST00000478596 ZNF337Q9Y3M9 751 aa12.83□□□□□ -0.36
USP11-207ENST00000478596 IGHV4-30-2A0A087WSY4 118 aa12.82□□□□□ -0.36
USP11-207ENST00000478596 A0A087WUJ7 227 aa12.82□□□□□ -0.36
USP11-207ENST00000478596 TNFSF11O14788 317 aa12.82□□□□□ -0.36
USP11-207ENST00000478596 CLOCKO15516 846 aa12.82□□□□□ -0.36
USP11-207ENST00000478596 PIP5K1CO60331 668 aa12.82□□□□□ -0.36
USP11-207ENST00000478596 CCNB2O95067 398 aa12.82□□□□□ -0.36
USP11-207ENST00000478596 NTN1O95631 604 aa12.82□□□□□ -0.36
USP11-207ENST00000478596 PPP3CBP16298 524 aa12.82□□□□□ -0.36
USP11-207ENST00000478596 ZNF23P17027 643 aa12.82□□□□□ -0.36
USP11-207ENST00000478596 CDKN1AP38936 164 aa12.82□□□□□ -0.36
USP11-207ENST00000478596 RBM34P42696 430 aaKnown RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms