RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 RPA2P15927 270 aa3.04□□□□□ -1.92
CDC42BPA-212ENST00000478573 ATF6P18850 670 aa3.04□□□□□ -1.92
CDC42BPA-212ENST00000478573 PAX7P23759 505 aa3.04□□□□□ -1.92
CDC42BPA-212ENST00000478573 ATP5A1P25705 553 aaKnown RBP3.04□□□□□ -1.92
CDC42BPA-212ENST00000478573 CHI3L1P36222 383 aaPredicted RBP3.04□□□□□ -1.92
CDC42BPA-212ENST00000478573 NBL1P41271 181 aa3.04□□□□□ -1.92
CDC42BPA-212ENST00000478573 RPS9P46781 194 aaKnown RBP3.04□□□□□ -1.92
CDC42BPA-212ENST00000478573 HNMTP50135 292 aa3.04□□□□□ -1.92
CDC42BPA-212ENST00000478573 PPT1P50897 306 aa3.04□□□□□ -1.92
CDC42BPA-212ENST00000478573 NOVA1P51513 510 aaKnown RBP3.04□□□□□ -1.92
CDC42BPA-212ENST00000478573 ARFIP1P53367 373 aa3.04□□□□□ -1.92
CDC42BPA-212ENST00000478573 PLA2G16P53816 162 aa3.04□□□□□ -1.92
CDC42BPA-212ENST00000478573 TNNC1P63316 161 aa3.04□□□□□ -1.92
CDC42BPA-212ENST00000478573 TFAMQ00059 246 aaKnown RBP3.04□□□□□ -1.92
CDC42BPA-212ENST00000478573 PAX2Q02962 417 aa3.04□□□□□ -1.92
CDC42BPA-212ENST00000478573 LRRC63Q05C16 580 aa3.04□□□□□ -1.92
CDC42BPA-212ENST00000478573 SPAG1Q07617 926 aa3.04□□□□□ -1.92
CDC42BPA-212ENST00000478573 RIPPLY1Q0D2K3 151 aa3.04□□□□□ -1.92
CDC42BPA-212ENST00000478573 RUNX3Q13761 415 aa3.04□□□□□ -1.92
CDC42BPA-212ENST00000478573 SLC10A1Q14973 349 aa3.04□□□□□ -1.92
CDC42BPA-212ENST00000478573 Q1RN00 199 aa3.04□□□□□ -1.92
CDC42BPA-212ENST00000478573 C15orf32Q32M92 178 aa3.04□□□□□ -1.92
CDC42BPA-212ENST00000478573 TMEM52BQ4KMG9 183 aa3.04□□□□□ -1.92
CDC42BPA-212ENST00000478573 EIPR1Q53HC9 387 aa3.04□□□□□ -1.92
CDC42BPA-212ENST00000478573 TEX44Q53QW1 395 aa3.04□□□□□ -1.92
CDC42BPA-212ENST00000478573 SPATA46Q5T0L3 261 aa3.04□□□□□ -1.92
CDC42BPA-212ENST00000478573 ATAD3BQ5T9A4 648 aa3.04□□□□□ -1.92
CDC42BPA-212ENST00000478573 WSCD1Q658N2 575 aa3.04□□□□□ -1.92
CDC42BPA-212ENST00000478573 PYHIN1Q6K0P9 492 aa3.04□□□□□ -1.92
CDC42BPA-212ENST00000478573 VASH2Q86V25 355 aa3.04□□□□□ -1.92
CDC42BPA-212ENST00000478573 SERPINA9Q86WD7 417 aa3.04□□□□□ -1.92
CDC42BPA-212ENST00000478573 MFSD6LQ8IWD5 586 aa3.04□□□□□ -1.92
CDC42BPA-212ENST00000478573 TBC1D21Q8IYX1 336 aa3.04□□□□□ -1.92
CDC42BPA-212ENST00000478573 PDCL2Q8N4E4 241 aa3.04□□□□□ -1.92
CDC42BPA-212ENST00000478573 STEAP2Q8NFT2 490 aa3.04□□□□□ -1.92
CDC42BPA-212ENST00000478573 OR52M1Q8NGK5 317 aa3.04□□□□□ -1.92
CDC42BPA-212ENST00000478573 OR2T3Q8NH03 318 aa3.04□□□□□ -1.92
CDC42BPA-212ENST00000478573 FBXO30Q8TB52 745 aa3.04□□□□□ -1.92
CDC42BPA-212ENST00000478573 ITFG1Q8TB96 612 aa3.04□□□□□ -1.92
CDC42BPA-212ENST00000478573 ADAMTS16Q8TE57 1224 aa3.04□□□□□ -1.92
CDC42BPA-212ENST00000478573 SLC5A11Q8WWX8 675 aa3.04□□□□□ -1.92
CDC42BPA-212ENST00000478573 IL1F10Q8WWZ1 152 aa3.04□□□□□ -1.92
CDC42BPA-212ENST00000478573 FAM3CQ92520 227 aa3.04□□□□□ -1.92
CDC42BPA-212ENST00000478573 FGF14Q92915 247 aa3.04□□□□□ -1.92
CDC42BPA-212ENST00000478573 SMARCD2Q92925 531 aa3.04□□□□□ -1.92
CDC42BPA-212ENST00000478573 PAGE5Q96GU1 130 aa3.04□□□□□ -1.92
CDC42BPA-212ENST00000478573 PPP1R16AQ96I34 528 aa3.04□□□□□ -1.92
CDC42BPA-212ENST00000478573 OMDQ99983 421 aa3.04□□□□□ -1.92
CDC42BPA-212ENST00000478573 DUSP16Q9BY84 665 aa3.04□□□□□ -1.92
CDC42BPA-212ENST00000478573 ELOVL4Q9GZR5 314 aa3.04□□□□□ -1.92
CDC42BPA-212ENST00000478573 MFSD1Q9H3U5 465 aa3.04□□□□□ -1.92
CDC42BPA-212ENST00000478573 C8orf33Q9H7E9 229 aaPredicted RBP3.04□□□□□ -1.92
CDC42BPA-212ENST00000478573 ZFP14Q9HCL3 533 aa3.04□□□□□ -1.92
CDC42BPA-212ENST00000478573 DMAC2Q9NW81 257 aa3.04□□□□□ -1.92
CDC42BPA-212ENST00000478573 RMND1Q9NWS8 449 aa3.04□□□□□ -1.92
CDC42BPA-212ENST00000478573 SNX6Q9UNH7 406 aa3.04□□□□□ -1.92
CDC42BPA-212ENST00000478573 GON4LQ3T8J9 2241 aa3.04□□□□□ -1.92
CDC42BPA-212ENST00000478573 DOCK9Q9BZ29 2069 aa3.04□□□□□ -1.92
CDC42BPA-212ENST00000478573 HCFC1P51610 2035 aa3.03□□□□□ -1.92
CDC42BPA-212ENST00000478573 PTPRBP23467 1997 aa3.03□□□□□ -1.92
CDC42BPA-212ENST00000478573 COL5A1P20908 1838 aaPredicted RBP3.03□□□□□ -1.92
CDC42BPA-212ENST00000478573 WDFY4Q6ZS81 3184 aa3.03□□□□□ -1.92
CDC42BPA-212ENST00000478573 FAM92AA1XBS5 289 aa3.03□□□□□ -1.92
CDC42BPA-212ENST00000478573 GOLGA8IPA6NC78 632 aa3.03□□□□□ -1.92
CDC42BPA-212ENST00000478573 GOLGA8JA6NMD2 632 aa3.03□□□□□ -1.92
CDC42BPA-212ENST00000478573 A8MX80 341 aa3.03□□□□□ -1.92
CDC42BPA-212ENST00000478573 GMFGO60234 142 aa3.03□□□□□ -1.92
CDC42BPA-212ENST00000478573 STX10O60499 249 aa3.03□□□□□ -1.92
CDC42BPA-212ENST00000478573 TM7SF2O76062 418 aa3.03□□□□□ -1.92
CDC42BPA-212ENST00000478573 RHOBTB1O94844 696 aa3.03□□□□□ -1.92
CDC42BPA-212ENST00000478573 SMC2O95347 1197 aa3.03□□□□□ -1.92
CDC42BPA-212ENST00000478573 ASS1P00966 412 aaKnown RBP3.03□□□□□ -1.92
CDC42BPA-212ENST00000478573 IGKV3-15P01624 115 aa3.03□□□□□ -1.92
CDC42BPA-212ENST00000478573 CD55P08174 381 aa3.03□□□□□ -1.92
CDC42BPA-212ENST00000478573 OR4Q2P0C623 313 aa3.03□□□□□ -1.92
CDC42BPA-212ENST00000478573 PSMC3P17980 439 aa3.03□□□□□ -1.92
CDC42BPA-212ENST00000478573 TNNI1P19237 187 aa3.03□□□□□ -1.92
CDC42BPA-212ENST00000478573 PGCP20142 388 aa3.03□□□□□ -1.92
CDC42BPA-212ENST00000478573 ATP6V1C1P21283 382 aa3.03□□□□□ -1.92
CDC42BPA-212ENST00000478573 IDSP22304 550 aa3.03□□□□□ -1.92
CDC42BPA-212ENST00000478573 IGHV1-2P23083 117 aa3.03□□□□□ -1.92
CDC42BPA-212ENST00000478573 MSNP26038 577 aaKnown RBP3.03□□□□□ -1.92
CDC42BPA-212ENST00000478573 ANXA13P27216 316 aa3.03□□□□□ -1.92
CDC42BPA-212ENST00000478573 GABRR2P28476 465 aa3.03□□□□□ -1.92
CDC42BPA-212ENST00000478573 CASP1P29466 404 aa3.03□□□□□ -1.92
CDC42BPA-212ENST00000478573 GTF2H1P32780 548 aa3.03□□□□□ -1.92
CDC42BPA-212ENST00000478573 CCR2P41597 374 aa3.03□□□□□ -1.92
CDC42BPA-212ENST00000478573 MAGEA5P43359 124 aa3.03□□□□□ -1.92
CDC42BPA-212ENST00000478573 XCR1P46094 333 aa3.03□□□□□ -1.92
CDC42BPA-212ENST00000478573 BDKRB1P46663 353 aa3.03□□□□□ -1.92
CDC42BPA-212ENST00000478573 GNPDA1P46926 289 aa3.03□□□□□ -1.92
CDC42BPA-212ENST00000478573 RGS4P49798 205 aa3.03□□□□□ -1.92
CDC42BPA-212ENST00000478573 NDUFA8P51970 172 aa3.03□□□□□ -1.92
CDC42BPA-212ENST00000478573 ARPP19P56211 112 aa3.03□□□□□ -1.92
CDC42BPA-212ENST00000478573 ERVPABLB-1P60509 514 aa3.03□□□□□ -1.92
CDC42BPA-212ENST00000478573 CBX1P83916 185 aa3.03□□□□□ -1.92
CDC42BPA-212ENST00000478573 SPIBQ01892 262 aa3.03□□□□□ -1.92
CDC42BPA-212ENST00000478573 RGS1Q08116 209 aa3.03□□□□□ -1.92
CDC42BPA-212ENST00000478573 INCA1Q0VD86 236 aa3.03□□□□□ -1.92
CDC42BPA-212ENST00000478573 PJVKQ0ZLH3 352 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms