RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 ACTR3BQ9P1U1 418 aa6.1□□□□□ -1.43
BRCA1-215ENST00000478531 B3GAT1Q9P2W7 334 aa6.1□□□□□ -1.43
BRCA1-215ENST00000478531 UPB1Q9UBR1 384 aa6.1□□□□□ -1.43
BRCA1-215ENST00000478531 KCNN3Q9UGI6 736 aa6.1□□□□□ -1.43
BRCA1-215ENST00000478531 NDRG3Q9UGV2 375 aa6.1□□□□□ -1.43
BRCA1-215ENST00000478531 MED31Q9Y3C7 131 aa6.1□□□□□ -1.43
BRCA1-215ENST00000478531 TESMINQ9Y4I5 508 aa6.1□□□□□ -1.43
BRCA1-215ENST00000478531 CADP27708 2225 aa6.1□□□□□ -1.43
BRCA1-215ENST00000478531 CYSRT1A8MQ03 144 aa6.09□□□□□ -1.43
BRCA1-215ENST00000478531 BLOC1S5-TXNDC5H3BN57 136 aa6.09□□□□□ -1.43
BRCA1-215ENST00000478531 PLPP3O14495 311 aa6.09□□□□□ -1.43
BRCA1-215ENST00000478531 RNF13O43567 381 aa6.09□□□□□ -1.43
BRCA1-215ENST00000478531 RRP9O43818 475 aaKnown RBP6.09□□□□□ -1.43
BRCA1-215ENST00000478531 RAD51DO75771 328 aa6.09□□□□□ -1.43
BRCA1-215ENST00000478531 DNAJC8O75937 253 aaPredicted RBP6.09□□□□□ -1.43
BRCA1-215ENST00000478531 FABP3P05413 133 aa6.09□□□□□ -1.43
BRCA1-215ENST00000478531 H1F0P07305 194 aaKnown RBP6.09□□□□□ -1.43
BRCA1-215ENST00000478531 SAGP10523 405 aaPredicted RBP6.09□□□□□ -1.43
BRCA1-215ENST00000478531 THRBP10828 461 aa6.09□□□□□ -1.43
BRCA1-215ENST00000478531 IFI30P13284 250 aa6.09□□□□□ -1.43
BRCA1-215ENST00000478531 ITGA2P17301 1181 aa6.09□□□□□ -1.43
BRCA1-215ENST00000478531 CDH2P19022 906 aaPredicted RBP6.09□□□□□ -1.43
BRCA1-215ENST00000478531 FUT1P19526 365 aa6.09□□□□□ -1.43
BRCA1-215ENST00000478531 VAMP1P23763 118 aa6.09□□□□□ -1.43
BRCA1-215ENST00000478531 ERFP50548 548 aa6.09□□□□□ -1.43
BRCA1-215ENST00000478531 LSM11P83369 360 aaKnown RBP eCLIP6.09□□□□□ -1.43
BRCA1-215ENST00000478531 CBX1P83916 185 aa6.09□□□□□ -1.43
BRCA1-215ENST00000478531 MS4A2Q01362 244 aa6.09□□□□□ -1.43
BRCA1-215ENST00000478531 SPIBQ01892 262 aa6.09□□□□□ -1.43
BRCA1-215ENST00000478531 POU4F3Q15319 338 aa6.09□□□□□ -1.43
BRCA1-215ENST00000478531 MTX3Q5HYI7 312 aa6.09□□□□□ -1.43
BRCA1-215ENST00000478531 CARD17Q5XLA6 110 aa6.09□□□□□ -1.43
BRCA1-215ENST00000478531 FBXW9Q5XUX1 488 aa6.09□□□□□ -1.43
BRCA1-215ENST00000478531 TBPL2Q6SJ96 375 aa6.09□□□□□ -1.43
BRCA1-215ENST00000478531 ZNF730Q6ZMV8 503 aa6.09□□□□□ -1.43
BRCA1-215ENST00000478531 SLC46A3Q7Z3Q1 461 aa6.09□□□□□ -1.43
BRCA1-215ENST00000478531 TSEN54Q7Z6J9 526 aaKnown RBP6.09□□□□□ -1.43
BRCA1-215ENST00000478531 EPHX4Q8IUS5 362 aa6.09□□□□□ -1.43
BRCA1-215ENST00000478531 ZDHHC21Q8IVQ6 265 aa6.09□□□□□ -1.43
BRCA1-215ENST00000478531 NRMQ8IXM6 262 aa6.09□□□□□ -1.43
BRCA1-215ENST00000478531 ZNF295-AS1Q8N0V1 137 aa6.09□□□□□ -1.43
BRCA1-215ENST00000478531 GABRG1Q8N1C3 465 aa6.09□□□□□ -1.43
BRCA1-215ENST00000478531 ZIC4Q8N9L1 334 aa6.09□□□□□ -1.43
BRCA1-215ENST00000478531 ADPRHL1Q8NDY3 354 aa6.09□□□□□ -1.43
BRCA1-215ENST00000478531 OR6S1Q8NH40 331 aa6.09□□□□□ -1.43
BRCA1-215ENST00000478531 S100PBPQ96BU1 408 aa6.09□□□□□ -1.43
BRCA1-215ENST00000478531 ASB9Q96DX5 294 aa6.09□□□□□ -1.43
BRCA1-215ENST00000478531 SGTBQ96EQ0 304 aa6.09□□□□□ -1.43
BRCA1-215ENST00000478531 C7orf34Q96L11 122 aa6.09□□□□□ -1.43
BRCA1-215ENST00000478531 HS6ST2Q96MM7 605 aa6.09□□□□□ -1.43
BRCA1-215ENST00000478531 WFIKKN1Q96NZ8 548 aa6.09□□□□□ -1.43
BRCA1-215ENST00000478531 OXGR1Q96P68 337 aa6.09□□□□□ -1.43
BRCA1-215ENST00000478531 SLCO5A1Q9H2Y9 848 aa6.09□□□□□ -1.43
BRCA1-215ENST00000478531 MUC13Q9H3R2 512 aa6.09□□□□□ -1.43
BRCA1-215ENST00000478531 FKRPQ9H9S5 495 aa6.09□□□□□ -1.43
BRCA1-215ENST00000478531 NMNAT1Q9HAN9 279 aaPredicted RBP6.09□□□□□ -1.43
BRCA1-215ENST00000478531 PARPBPQ9NWS1 579 aa6.09□□□□□ -1.43
BRCA1-215ENST00000478531 ASB6Q9NWX5 421 aa6.09□□□□□ -1.43
BRCA1-215ENST00000478531 MED29Q9NX70 200 aa6.09□□□□□ -1.43
BRCA1-215ENST00000478531 MRPL39Q9NYK5 338 aaKnown RBP6.09□□□□□ -1.43
BRCA1-215ENST00000478531 ZNF229Q9UJW7 825 aa6.09□□□□□ -1.43
BRCA1-215ENST00000478531 PLCE1Q9P212 2302 aa6.09□□□□□ -1.43
BRCA1-215ENST00000478531 CREBBPQ92793 2442 aa6.09□□□□□ -1.43
BRCA1-215ENST00000478531 HEATR1Q9H583 2144 aaKnown RBP6.09□□□□□ -1.43
BRCA1-215ENST00000478531 CIB4A0PJX0 185 aa6.09□□□□□ -1.43
BRCA1-215ENST00000478531 MS4A18H0YCH9 400 aa6.09□□□□□ -1.43
BRCA1-215ENST00000478531 TRAF3IP2O43734 574 aaPredicted RBP6.09□□□□□ -1.43
BRCA1-215ENST00000478531 FZD7O75084 574 aa6.09□□□□□ -1.43
BRCA1-215ENST00000478531 OR7A10O76100 309 aa6.09□□□□□ -1.43
BRCA1-215ENST00000478531 PRSS23O95084 383 aa6.09□□□□□ -1.43
BRCA1-215ENST00000478531 SEMG1P04279 462 aa6.09□□□□□ -1.43
BRCA1-215ENST00000478531 EPXP11678 715 aa6.09□□□□□ -1.43
BRCA1-215ENST00000478531 RHCEP18577 417 aa6.09□□□□□ -1.43
BRCA1-215ENST00000478531 IGHV1-2P23083 117 aa6.09□□□□□ -1.43
BRCA1-215ENST00000478531 GPR4P46093 362 aa6.09□□□□□ -1.43
BRCA1-215ENST00000478531 BNIP1Q12981 228 aa6.09□□□□□ -1.43
BRCA1-215ENST00000478531 ITGADQ13349 1161 aa6.09□□□□□ -1.43
BRCA1-215ENST00000478531 MS4A18Q3C1V0 323 aa6.09□□□□□ -1.43
BRCA1-215ENST00000478531 SFRP5Q5T4F7 317 aa6.09□□□□□ -1.43
BRCA1-215ENST00000478531 TSPO2Q5TGU0 170 aa6.09□□□□□ -1.43
BRCA1-215ENST00000478531 LCN8Q6JVE9 175 aa6.09□□□□□ -1.43
BRCA1-215ENST00000478531 C22orf34Q6ZV56 151 aa6.09□□□□□ -1.43
BRCA1-215ENST00000478531 RRM2BQ7LG56 351 aa6.09□□□□□ -1.43
BRCA1-215ENST00000478531 BHLHA15Q7RTS1 189 aaPredicted RBP6.09□□□□□ -1.43
BRCA1-215ENST00000478531 FAM222BQ8WU58 562 aa6.09□□□□□ -1.43
BRCA1-215ENST00000478531 ACOT11Q8WXI4 607 aaPredicted RBP6.09□□□□□ -1.43
BRCA1-215ENST00000478531 TMEM45BQ96B21 275 aa6.09□□□□□ -1.43
BRCA1-215ENST00000478531 BPIFA2Q96DR5 249 aa6.09□□□□□ -1.43
BRCA1-215ENST00000478531 PIP5K1AQ99755 562 aa6.09□□□□□ -1.43
BRCA1-215ENST00000478531 EMC6Q9BV81 110 aa6.09□□□□□ -1.43
BRCA1-215ENST00000478531 TRIM15Q9C019 465 aa6.09□□□□□ -1.43
BRCA1-215ENST00000478531 MCCC2Q9HCC0 563 aa6.09□□□□□ -1.43
BRCA1-215ENST00000478531 SLC7A10Q9NS82 523 aa6.09□□□□□ -1.43
BRCA1-215ENST00000478531 MALT1Q9UDY8 824 aa6.09□□□□□ -1.43
BRCA1-215ENST00000478531 NOX1Q9Y5S8 564 aa6.09□□□□□ -1.43
BRCA1-215ENST00000478531 TRAV27A0A087WT01 109 aa6.08□□□□□ -1.44
BRCA1-215ENST00000478531 A0A087WUU8 490 aa6.08□□□□□ -1.44
BRCA1-215ENST00000478531 TRBV4-1A0A0J9YWV2 114 aa6.08□□□□□ -1.44
BRCA1-215ENST00000478531 TCRBV5S2A0A599 114 aa6.08□□□□□ -1.44
BRCA1-215ENST00000478531 A6NNC1 897 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms