RNA–Protein interactions for RNA: ENST00000478473.1

C9orf3-215, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-215ENST00000478473 MRASO14807 208 aa20.48■□□□□ 0.87
C9orf3-215ENST00000478473 WNT11O96014 354 aa20.48■□□□□ 0.87
C9orf3-215ENST00000478473 THY1P04216 161 aa20.48■□□□□ 0.87
C9orf3-215ENST00000478473 MDH1P40925 334 aaKnown RBP20.48■□□□□ 0.87
C9orf3-215ENST00000478473 LGALS3BPQ08380 585 aa20.48■□□□□ 0.87
C9orf3-215ENST00000478473 TBRG1Q3YBR2 411 aa20.48■□□□□ 0.87
C9orf3-215ENST00000478473 ENTPD8Q5MY95 495 aa20.48■□□□□ 0.87
C9orf3-215ENST00000478473 ERICH5Q6P6B1 374 aa20.48■□□□□ 0.87
C9orf3-215ENST00000478473 DNM1P46Q6ZS02 220 aa20.48■□□□□ 0.87
C9orf3-215ENST00000478473 CIARTQ8N365 385 aaPredicted RBP20.48■□□□□ 0.87
C9orf3-215ENST00000478473 C10orf82Q8WW14 230 aa20.48■□□□□ 0.87
C9orf3-215ENST00000478473 TRMT61AQ96FX7 289 aaKnown RBP20.48■□□□□ 0.87
C9orf3-215ENST00000478473 MPP4Q96JB8 637 aa20.48■□□□□ 0.87
C9orf3-215ENST00000478473 ALKBH3Q96Q83 286 aaPredicted RBP20.48■□□□□ 0.87
C9orf3-215ENST00000478473 NELFAQ9H3P2 528 aa20.48■□□□□ 0.87
C9orf3-215ENST00000478473 MOV10Q9HCE1 1003 aaKnown RBP20.48■□□□□ 0.87
C9orf3-215ENST00000478473 CRNNQ9UBG3 495 aaPredicted RBP20.48■□□□□ 0.87
C9orf3-215ENST00000478473 NSD1Q96L73 2696 aaPredicted RBP20.48■□□□□ 0.87
C9orf3-215ENST00000478473 ATP8B1O43520 1251 aa20.47■□□□□ 0.87
C9orf3-215ENST00000478473 AKAP8O43823 692 aaKnown RBP20.47■□□□□ 0.87
C9orf3-215ENST00000478473 KRT33AO76009 404 aa20.47■□□□□ 0.87
C9orf3-215ENST00000478473 HPRP00739 348 aa20.47■□□□□ 0.87
C9orf3-215ENST00000478473 TTKP33981 857 aa20.47■□□□□ 0.87
C9orf3-215ENST00000478473 HIKESHIQ53FT3 197 aa20.47■□□□□ 0.87
C9orf3-215ENST00000478473 AGAP6Q5VW22 663 aa20.47■□□□□ 0.87
C9orf3-215ENST00000478473 C11orf71Q6IPW1 123 aa20.47■□□□□ 0.87
C9orf3-215ENST00000478473 ZNF544Q6NX49 715 aa20.47■□□□□ 0.87
C9orf3-215ENST00000478473 ANKRD16Q6P6B7 361 aa20.47■□□□□ 0.87
C9orf3-215ENST00000478473 TSPYL5Q86VY4 417 aaPredicted RBP20.47■□□□□ 0.87
C9orf3-215ENST00000478473 SNX32Q86XE0 403 aa20.47■□□□□ 0.87
C9orf3-215ENST00000478473 RBM45Q8IUH3 476 aaKnown RBP20.47■□□□□ 0.87
C9orf3-215ENST00000478473 PCYOX1LQ8NBM8 494 aa20.47■□□□□ 0.87
C9orf3-215ENST00000478473 ADAMTS16Q8TE57 1224 aa20.47■□□□□ 0.87
C9orf3-215ENST00000478473 LRR1Q96L50 414 aa20.47■□□□□ 0.87
C9orf3-215ENST00000478473 MOGAT1Q96PD6 335 aa20.47■□□□□ 0.87
C9orf3-215ENST00000478473 OR2M2Q96R28 347 aa20.47■□□□□ 0.87
C9orf3-215ENST00000478473 ECSITQ9BQ95 431 aa20.47■□□□□ 0.87
C9orf3-215ENST00000478473 SLC19A3Q9BZV2 496 aa20.47■□□□□ 0.87
C9orf3-215ENST00000478473 TRAPPC13A5PLN9 417 aa20.46■□□□□ 0.87
C9orf3-215ENST00000478473 H7C1Q1 480 aa20.46■□□□□ 0.87
C9orf3-215ENST00000478473 M0R1B8 84 aa20.46■□□□□ 0.87
C9orf3-215ENST00000478473 SLC43A1O75387 559 aa20.46■□□□□ 0.87
C9orf3-215ENST00000478473 SPOCK1Q08629 439 aa20.46■□□□□ 0.87
C9orf3-215ENST00000478473 C1DQ13901 141 aaKnown RBP20.46■□□□□ 0.87
C9orf3-215ENST00000478473 MMEL1Q495T6 779 aa20.46■□□□□ 0.87
C9orf3-215ENST00000478473 SLC22A25Q6T423 547 aa20.46■□□□□ 0.87
C9orf3-215ENST00000478473 KLHL24Q6TFL4 600 aa20.46■□□□□ 0.87
C9orf3-215ENST00000478473 B3GLCTQ6Y288 498 aa20.46■□□□□ 0.87
C9orf3-215ENST00000478473 WDR88Q6ZMY6 472 aa20.46■□□□□ 0.87
C9orf3-215ENST00000478473 PXKQ7Z7A4 578 aa20.46■□□□□ 0.87
C9orf3-215ENST00000478473 DEPDC4Q8N2C3 294 aa20.46■□□□□ 0.87
C9orf3-215ENST00000478473 PIAS4Q8N2W9 510 aaPredicted RBP20.46■□□□□ 0.87
C9orf3-215ENST00000478473 PIK3C3Q8NEB9 887 aa20.46■□□□□ 0.87
C9orf3-215ENST00000478473 GTPBP3Q969Y2 492 aaKnown RBP20.46■□□□□ 0.87
C9orf3-215ENST00000478473 ASPNQ9BXN1 380 aa20.46■□□□□ 0.87
C9orf3-215ENST00000478473 GID8Q9NWU2 228 aa20.46■□□□□ 0.87
C9orf3-215ENST00000478473 NOX1Q9Y5S8 564 aa20.46■□□□□ 0.87
C9orf3-215ENST00000478473 CAPN7Q9Y6W3 813 aa20.46■□□□□ 0.87
C9orf3-215ENST00000478473 ZANQ9Y493 2812 aa20.46■□□□□ 0.87
C9orf3-215ENST00000478473 ALPK2Q86TB3 2170 aa20.46■□□□□ 0.87
C9orf3-215ENST00000478473 TRIM64A6NGJ6 449 aa20.45■□□□□ 0.86
C9orf3-215ENST00000478473 TRIM64BA6NI03 449 aa20.45■□□□□ 0.86
C9orf3-215ENST00000478473 PLPP3O14495 311 aa20.45■□□□□ 0.86
C9orf3-215ENST00000478473 ROR2Q01974 943 aaKnown RBP20.45■□□□□ 0.86
C9orf3-215ENST00000478473 PUDPQ08623 228 aa20.45■□□□□ 0.86
C9orf3-215ENST00000478473 HMBOX1Q6NT76 420 aa20.45■□□□□ 0.86
C9orf3-215ENST00000478473 ZNF627Q7L945 461 aa20.45■□□□□ 0.86
C9orf3-215ENST00000478473 UEVLDQ8IX04 471 aa20.45■□□□□ 0.86
C9orf3-215ENST00000478473 SLC26A7Q8TE54 656 aa20.45■□□□□ 0.86
C9orf3-215ENST00000478473 POM121Q96HA1 1249 aa20.45■□□□□ 0.86
C9orf3-215ENST00000478473 SMR3AQ99954 134 aa20.45■□□□□ 0.86
C9orf3-215ENST00000478473 POLR2J2Q9GZM3 115 aaKnown RBP20.45■□□□□ 0.86
C9orf3-215ENST00000478473 POLR2J3Q9H1A7 115 aaKnown RBP20.45■□□□□ 0.86
C9orf3-215ENST00000478473 FKRPQ9H9S5 495 aa20.45■□□□□ 0.86
C9orf3-215ENST00000478473 CBLN4Q9NTU7 201 aa20.45■□□□□ 0.86
C9orf3-215ENST00000478473 BAG5Q9UL15 447 aa20.45■□□□□ 0.86
C9orf3-215ENST00000478473 LOC100653049A0A140TA62 436 aa20.44■□□□□ 0.86
C9orf3-215ENST00000478473 KRT34O76011 436 aa20.44■□□□□ 0.86
C9orf3-215ENST00000478473 IGLV1-44P01699 117 aa20.44■□□□□ 0.86
C9orf3-215ENST00000478473 HEXAP06865 529 aa20.44■□□□□ 0.86
C9orf3-215ENST00000478473 HLA-DOBP13765 273 aa20.44■□□□□ 0.86
C9orf3-215ENST00000478473 HOXB4P17483 251 aaPredicted RBP20.44■□□□□ 0.86
C9orf3-215ENST00000478473 ZP4Q12836 540 aa20.44■□□□□ 0.86
C9orf3-215ENST00000478473 ZNF74Q16587 644 aa20.44■□□□□ 0.86
C9orf3-215ENST00000478473 C20orf196Q8IYI0 205 aa20.44■□□□□ 0.86
C9orf3-215ENST00000478473 OR5J2Q8NH18 312 aa20.44■□□□□ 0.86
C9orf3-215ENST00000478473 RP9Q8TA86 221 aaKnown RBP20.44■□□□□ 0.86
C9orf3-215ENST00000478473 PRSS27Q9BQR3 290 aa20.44■□□□□ 0.86
C9orf3-215ENST00000478473 C1QTNF6Q9BXI9 259 aa20.44■□□□□ 0.86
C9orf3-215ENST00000478473 ALG2Q9H553 416 aa20.44■□□□□ 0.86
C9orf3-215ENST00000478473 GPR35Q9HC97 309 aa20.44■□□□□ 0.86
C9orf3-215ENST00000478473 CPSF4LA6NMK7 179 aaKnown RBP20.43■□□□□ 0.86
C9orf3-215ENST00000478473 FAM220BPB1ANY3 271 aa20.43■□□□□ 0.86
C9orf3-215ENST00000478473 IGF2P01344 180 aa20.43■□□□□ 0.86
C9orf3-215ENST00000478473 IGKV3-15P01624 115 aa20.43■□□□□ 0.86
C9orf3-215ENST00000478473 NQO1P15559 274 aaKnown RBP20.43■□□□□ 0.86
C9orf3-215ENST00000478473 CDH2P19022 906 aaPredicted RBP20.43■□□□□ 0.86
C9orf3-215ENST00000478473 CBLP22681 906 aa20.43■□□□□ 0.86
C9orf3-215ENST00000478473 CDKN1AP38936 164 aa20.43■□□□□ 0.86
C9orf3-215ENST00000478473 PMS2P3Q13401 168 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms