RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 CCDC28BQ9BUN5 200 aa12.59□□□□□ -0.39
SMARCE1-209ENST00000478349 PTDSS2Q9BVG9 487 aa12.59□□□□□ -0.39
SMARCE1-209ENST00000478349 RAB1BQ9H0U4 201 aa12.59□□□□□ -0.39
SMARCE1-209ENST00000478349 ZNF442Q9H7R0 627 aa12.59□□□□□ -0.39
SMARCE1-209ENST00000478349 CRNNQ9UBG3 495 aaPredicted RBP12.59□□□□□ -0.39
SMARCE1-209ENST00000478349 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.59□□□□□ -0.39
SMARCE1-209ENST00000478349 KCNS2Q9ULS6 477 aa12.59□□□□□ -0.39
SMARCE1-209ENST00000478349 USP22Q9UPT9 525 aa12.59□□□□□ -0.39
SMARCE1-209ENST00000478349 ANGPT4Q9Y264 503 aa12.59□□□□□ -0.39
SMARCE1-209ENST00000478349 ATRQ13535 2644 aa12.59□□□□□ -0.39
SMARCE1-209ENST00000478349 CADP27708 2225 aa12.59□□□□□ -0.39
SMARCE1-209ENST00000478349 A0A096LNT2 108 aa12.58□□□□□ -0.4
SMARCE1-209ENST00000478349 A0A096LPE4 126 aa12.58□□□□□ -0.4
SMARCE1-209ENST00000478349 LOC102725191A0A1B0GVB3 256 aa12.58□□□□□ -0.4
SMARCE1-209ENST00000478349 A0A1B0GWA3 101 aa12.58□□□□□ -0.4
SMARCE1-209ENST00000478349 A0A1W2PPZ6 126 aa12.58□□□□□ -0.4
SMARCE1-209ENST00000478349 M0R082 166 aa12.58□□□□□ -0.4
SMARCE1-209ENST00000478349 FZD7O75084 574 aa12.58□□□□□ -0.4
SMARCE1-209ENST00000478349 UPK3AO75631 287 aa12.58□□□□□ -0.4
SMARCE1-209ENST00000478349 C8BP07358 591 aa12.58□□□□□ -0.4
SMARCE1-209ENST00000478349 NUDT7P0C024 238 aa12.58□□□□□ -0.4
SMARCE1-209ENST00000478349 OR4A8P0C604 315 aa12.58□□□□□ -0.4
SMARCE1-209ENST00000478349 CAPZA2P47755 286 aa12.58□□□□□ -0.4
SMARCE1-209ENST00000478349 ATP4BP51164 291 aa12.58□□□□□ -0.4
SMARCE1-209ENST00000478349 LSM11P83369 360 aaKnown RBP eCLIP12.58□□□□□ -0.4
SMARCE1-209ENST00000478349 CARTPTQ16568 116 aa12.58□□□□□ -0.4
SMARCE1-209ENST00000478349 PRR14LQ5THK1 2151 aa12.58□□□□□ -0.4
SMARCE1-209ENST00000478349 AGBL2Q5U5Z8 902 aa12.58□□□□□ -0.4
SMARCE1-209ENST00000478349 BLOC1S3Q6QNY0 202 aa12.58□□□□□ -0.4
SMARCE1-209ENST00000478349 SCAIQ8N9R8 606 aa12.58□□□□□ -0.4
SMARCE1-209ENST00000478349 ZNF417Q8TAU3 575 aa12.58□□□□□ -0.4
SMARCE1-209ENST00000478349 KTI12Q96EK9 354 aaPredicted RBP12.58□□□□□ -0.4
SMARCE1-209ENST00000478349 ZNF587Q96SQ5 575 aaPredicted RBP12.58□□□□□ -0.4
SMARCE1-209ENST00000478349 TMEM38AQ9H6F2 299 aa12.58□□□□□ -0.4
SMARCE1-209ENST00000478349 CCDC167Q9P0B6 97 aa12.58□□□□□ -0.4
SMARCE1-209ENST00000478349 FBXL3Q9UKT7 428 aa12.58□□□□□ -0.4
SMARCE1-209ENST00000478349 SPEF1Q9Y4P9 236 aa12.58□□□□□ -0.4
SMARCE1-209ENST00000478349 NOX1Q9Y5S8 564 aa12.58□□□□□ -0.4
SMARCE1-209ENST00000478349 GMEB1Q9Y692 573 aa12.58□□□□□ -0.4
SMARCE1-209ENST00000478349 SONP18583 2426 aaKnown RBP12.58□□□□□ -0.4
SMARCE1-209ENST00000478349 ZNF99A8MXY4 864 aaPredicted RBP12.57□□□□□ -0.4
SMARCE1-209ENST00000478349 GPRIN2O60269 458 aa12.57□□□□□ -0.4
SMARCE1-209ENST00000478349 IGKV3-15P01624 115 aa12.57□□□□□ -0.4
SMARCE1-209ENST00000478349 IGLV1-44P01699 117 aa12.57□□□□□ -0.4
SMARCE1-209ENST00000478349 CECR9P0C854 216 aa12.57□□□□□ -0.4
SMARCE1-209ENST00000478349 CBR1P16152 277 aa12.57□□□□□ -0.4
SMARCE1-209ENST00000478349 GRPRP30550 384 aa12.57□□□□□ -0.4
SMARCE1-209ENST00000478349 LSP1P33241 339 aa12.57□□□□□ -0.4
SMARCE1-209ENST00000478349 ARF1P84077 181 aaKnown RBP12.57□□□□□ -0.4
SMARCE1-209ENST00000478349 HOXC5Q00444 222 aa12.57□□□□□ -0.4
SMARCE1-209ENST00000478349 EGR4Q05215 589 aa12.57□□□□□ -0.4
SMARCE1-209ENST00000478349 SCARB2Q14108 478 aa12.57□□□□□ -0.4
SMARCE1-209ENST00000478349 GGTLC2Q14390 218 aa12.57□□□□□ -0.4
SMARCE1-209ENST00000478349 SQLEQ14534 574 aa12.57□□□□□ -0.4
SMARCE1-209ENST00000478349 IQCCQ4KMZ1 466 aa12.57□□□□□ -0.4
SMARCE1-209ENST00000478349 FAM166AQ6J272 317 aa12.57□□□□□ -0.4
SMARCE1-209ENST00000478349 VHLLQ6RSH7 139 aa12.57□□□□□ -0.4
SMARCE1-209ENST00000478349 ARMC8Q8IUR7 673 aa12.57□□□□□ -0.4
SMARCE1-209ENST00000478349 HIPK4Q8NE63 616 aa12.57□□□□□ -0.4
SMARCE1-209ENST00000478349 SORCS2Q96PQ0 1159 aa12.57□□□□□ -0.4
SMARCE1-209ENST00000478349 CRLF2Q9HC73 371 aa12.57□□□□□ -0.4
SMARCE1-209ENST00000478349 GPR35Q9HC97 309 aa12.57□□□□□ -0.4
SMARCE1-209ENST00000478349 DYNLRB1Q9NP97 96 aa12.57□□□□□ -0.4
SMARCE1-209ENST00000478349 CHST2Q9Y4C5 530 aa12.57□□□□□ -0.4
SMARCE1-209ENST00000478349 LMX1BO60663 402 aa12.56□□□□□ -0.4
SMARCE1-209ENST00000478349 ZNF432O94892 652 aa12.56□□□□□ -0.4
SMARCE1-209ENST00000478349 MT-ATP6P00846 226 aa12.56□□□□□ -0.4
SMARCE1-209ENST00000478349 APEHP13798 732 aaKnown RBP12.56□□□□□ -0.4
SMARCE1-209ENST00000478349 ZNF16P17020 682 aaPredicted RBP12.56□□□□□ -0.4
SMARCE1-209ENST00000478349 NPR2P20594 1047 aa12.56□□□□□ -0.4
SMARCE1-209ENST00000478349 NR4A2P43354 598 aa12.56□□□□□ -0.4
SMARCE1-209ENST00000478349 IDH3GP51553 393 aaPredicted RBP12.56□□□□□ -0.4
SMARCE1-209ENST00000478349 NPRL3Q12980 569 aa12.56□□□□□ -0.4
SMARCE1-209ENST00000478349 ADIPOQQ15848 244 aa12.56□□□□□ -0.4
SMARCE1-209ENST00000478349 CEACAM16Q2WEN9 425 aa12.56□□□□□ -0.4
SMARCE1-209ENST00000478349 UGT2A3Q6UWM9 527 aa12.56□□□□□ -0.4
SMARCE1-209ENST00000478349 SLC30A8Q8IWU4 369 aa12.56□□□□□ -0.4
SMARCE1-209ENST00000478349 C10orf53Q8N6V4 93 aa12.56□□□□□ -0.4
SMARCE1-209ENST00000478349 NEU4Q8WWR8 484 aaPredicted RBP12.56□□□□□ -0.4
SMARCE1-209ENST00000478349 LRR1Q96L50 414 aa12.56□□□□□ -0.4
SMARCE1-209ENST00000478349 OR2M2Q96R28 347 aa12.56□□□□□ -0.4
SMARCE1-209ENST00000478349 PLK3Q9H4B4 646 aa12.56□□□□□ -0.4
SMARCE1-209ENST00000478349 DENND2DQ9H6A0 471 aaPredicted RBP12.56□□□□□ -0.4
SMARCE1-209ENST00000478349 KLHL14Q9P2G3 628 aa12.56□□□□□ -0.4
SMARCE1-209ENST00000478349 B3GAT1Q9P2W7 334 aa12.56□□□□□ -0.4
SMARCE1-209ENST00000478349 TRIM33Q9UPN9 1127 aa12.56□□□□□ -0.4
SMARCE1-209ENST00000478349 PLCE1Q9P212 2302 aa12.55□□□□□ -0.4
SMARCE1-209ENST00000478349 A0A087WUJ7 227 aa12.55□□□□□ -0.4
SMARCE1-209ENST00000478349 ZNF726A6NNF4 738 aa12.55□□□□□ -0.4
SMARCE1-209ENST00000478349 TRAF3IP2O43734 574 aaPredicted RBP12.55□□□□□ -0.4
SMARCE1-209ENST00000478349 FMO6PO60774 539 aa12.55□□□□□ -0.4
SMARCE1-209ENST00000478349 IGHV4-31P0DP07 118 aa12.55□□□□□ -0.4
SMARCE1-209ENST00000478349 HOXB9P17482 250 aaPredicted RBP12.55□□□□□ -0.4
SMARCE1-209ENST00000478349 GPX2P18283 190 aa12.55□□□□□ -0.4
SMARCE1-209ENST00000478349 THBS2P35442 1172 aa12.55□□□□□ -0.4
SMARCE1-209ENST00000478349 IDH3AP50213 366 aa12.55□□□□□ -0.4
SMARCE1-209ENST00000478349 AQP5P55064 265 aa12.55□□□□□ -0.4
SMARCE1-209ENST00000478349 RPS23P62266 143 aaKnown RBP12.55□□□□□ -0.4
SMARCE1-209ENST00000478349 TUBA1BP68363 451 aa12.55□□□□□ -0.4
SMARCE1-209ENST00000478349 TUBA4AP68366 448 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms