RNA–Protein interactions for RNA: ENST00000478085.5

SGSM3-209, Transcript of small G protein signaling modulator 3, human

TSL 2

Gene SGSM3, Length 4,218 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SGSM3-209	ENST00000478085	ANKRD9	Q96BM1	317 aa	Predicted RBP	10.84	□□□□□ -0.67
SGSM3-209	ENST00000478085	FANCF	Q9NPI8	374 aa		10.84	□□□□□ -0.67
SGSM3-209	ENST00000478085	FOXS1	O43638	330 aa		10.84	□□□□□ -0.67
SGSM3-209	ENST00000478085	SLC35A1	P78382	337 aa		10.84	□□□□□ -0.67
SGSM3-209	ENST00000478085	MRPL49	Q13405	166 aa	Known RBP	10.84	□□□□□ -0.67
SGSM3-209	ENST00000478085	RIN1	Q13671	783 aa		10.84	□□□□□ -0.67
SGSM3-209	ENST00000478085	LRRN1	Q6UXK5	716 aa		10.84	□□□□□ -0.67
SGSM3-209	ENST00000478085	OR6Q1	Q8NGQ2	317 aa		10.84	□□□□□ -0.67
SGSM3-209	ENST00000478085	PIGQ	Q9BRB3	760 aa		10.84	□□□□□ -0.67
SGSM3-209	ENST00000478085	LAT2	Q9GZY6	243 aa		10.84	□□□□□ -0.67
SGSM3-209	ENST00000478085	ENKD1	Q9H0I2	346 aa		10.84	□□□□□ -0.67
SGSM3-209	ENST00000478085	CALHM2	Q9HA72	323 aa		10.84	□□□□□ -0.67
SGSM3-209	ENST00000478085	EXO1	Q9UQ84	846 aa	Known RBP	10.84	□□□□□ -0.67
SGSM3-209	ENST00000478085	B3GALT1	Q9Y5Z6	326 aa		10.84	□□□□□ -0.67
SGSM3-209	ENST00000478085	RTTN	Q86VV8	2226 aa		10.84	□□□□□ -0.67
SGSM3-209	ENST00000478085	CCDC88C	Q9P219	2028 aa		10.83	□□□□□ -0.68
SGSM3-209	ENST00000478085	RBMXL2	O75526	392 aa	Known RBP	10.83	□□□□□ -0.68
SGSM3-209	ENST00000478085	OR2T7	P0C7T2	308 aa		10.83	□□□□□ -0.68
SGSM3-209	ENST00000478085	C4orf46	Q504U0	113 aa		10.83	□□□□□ -0.68
SGSM3-209	ENST00000478085	MTFR2	Q6P444	385 aa		10.83	□□□□□ -0.68
SGSM3-209	ENST00000478085	BBS1	Q8NFJ9	593 aa		10.83	□□□□□ -0.68
SGSM3-209	ENST00000478085	OR2T27	Q8NH04	317 aa		10.83	□□□□□ -0.68
SGSM3-209	ENST00000478085	TAAR9	Q96RI9	348 aa		10.83	□□□□□ -0.68
SGSM3-209	ENST00000478085	ABCG5	Q9H222	651 aa		10.83	□□□□□ -0.68
SGSM3-209	ENST00000478085	OSGIN1	Q9UJX0	560 aa		10.83	□□□□□ -0.68
SGSM3-209	ENST00000478085	PCDHGB2	Q9Y5G2	931 aa		10.83	□□□□□ -0.68
SGSM3-209	ENST00000478085	CCDC187	A0A096LP49	1063 aa		10.83	□□□□□ -0.68
SGSM3-209	ENST00000478085	NPIPB8	E9PQR5	432 aa		10.83	□□□□□ -0.68
SGSM3-209	ENST00000478085		H0YC42	278 aa		10.83	□□□□□ -0.68
SGSM3-209	ENST00000478085	APOC1	P02654	83 aa		10.83	□□□□□ -0.68
SGSM3-209	ENST00000478085	CTSB	P07858	339 aa		10.83	□□□□□ -0.68
SGSM3-209	ENST00000478085	RBM34	P42696	430 aa	Known RBP	10.83	□□□□□ -0.68
SGSM3-209	ENST00000478085	GNG2	P59768	71 aa		10.83	□□□□□ -0.68
SGSM3-209	ENST00000478085	CCBE1	Q6UXH8	406 aa	Predicted RBP	10.83	□□□□□ -0.68
SGSM3-209	ENST00000478085	LRRC69	Q6ZNQ3	347 aa		10.83	□□□□□ -0.68
SGSM3-209	ENST00000478085	FAM26E	Q8N5C1	309 aa		10.83	□□□□□ -0.68
SGSM3-209	ENST00000478085	GINS4	Q9BRT9	223 aa		10.83	□□□□□ -0.68
SGSM3-209	ENST00000478085	PLA2G12A	Q9BZM1	189 aa		10.83	□□□□□ -0.68
SGSM3-209	ENST00000478085	OR2B2	Q9GZK3	357 aa		10.83	□□□□□ -0.68
SGSM3-209	ENST00000478085	MED29	Q9NX70	200 aa		10.83	□□□□□ -0.68
SGSM3-209	ENST00000478085	DIMT1	Q9UNQ2	313 aa	Known RBP	10.83	□□□□□ -0.68
SGSM3-209	ENST00000478085	SLC7A11	Q9UPY5	501 aa		10.83	□□□□□ -0.68
SGSM3-209	ENST00000478085	OR6C76	A6NM76	312 aa		10.83	□□□□□ -0.68
SGSM3-209	ENST00000478085	HR	O43593	1189 aa		10.83	□□□□□ -0.68
SGSM3-209	ENST00000478085	SELENOF	O60613	162 aa		10.83	□□□□□ -0.68
SGSM3-209	ENST00000478085	RBBP9	O75884	186 aa		10.83	□□□□□ -0.68
SGSM3-209	ENST00000478085	TMEM225B	P0DP42	221 aa		10.83	□□□□□ -0.68
SGSM3-209	ENST00000478085	DRD5	P21918	477 aa		10.83	□□□□□ -0.68
SGSM3-209	ENST00000478085	AVPR2	P30518	371 aa		10.83	□□□□□ -0.68
SGSM3-209	ENST00000478085	PCBP3	P57721	371 aa	Known RBP	10.83	□□□□□ -0.68
SGSM3-209	ENST00000478085	C21orf58	P58505	322 aa		10.83	□□□□□ -0.68
SGSM3-209	ENST00000478085	RPS25	P62851	125 aa	Known RBP	10.83	□□□□□ -0.68
SGSM3-209	ENST00000478085	SIRPA	P78324	504 aa		10.83	□□□□□ -0.68
SGSM3-209	ENST00000478085	TRIP6	Q15654	476 aa	Known RBP	10.83	□□□□□ -0.68
SGSM3-209	ENST00000478085	ACKR1	Q16570	336 aa		10.83	□□□□□ -0.68
SGSM3-209	ENST00000478085	MEP1B	Q16820	701 aa		10.83	□□□□□ -0.68
SGSM3-209	ENST00000478085	PRTG	Q2VWP7	1150 aa		10.83	□□□□□ -0.68
SGSM3-209	ENST00000478085	C5orf46	Q6UWT4	87 aa		10.83	□□□□□ -0.68
SGSM3-209	ENST00000478085	D2HGDH	Q8N465	521 aa		10.83	□□□□□ -0.68
SGSM3-209	ENST00000478085	TRMT10A	Q8TBZ6	339 aa	Known RBP	10.83	□□□□□ -0.68
SGSM3-209	ENST00000478085	FUZ	Q9BT04	418 aa		10.83	□□□□□ -0.68
SGSM3-209	ENST00000478085	POU2F3	Q9UKI9	436 aa		10.83	□□□□□ -0.68
SGSM3-209	ENST00000478085		A6NLC8	198 aa		10.82	□□□□□ -0.68
SGSM3-209	ENST00000478085		D6RAR5	112 aa		10.82	□□□□□ -0.68
SGSM3-209	ENST00000478085	KLRC4-KLRK1	H3BQV0	150 aa		10.82	□□□□□ -0.68
SGSM3-209	ENST00000478085	UPK1B	O75841	260 aa		10.82	□□□□□ -0.68
SGSM3-209	ENST00000478085	ZNF432	O94892	652 aa		10.82	□□□□□ -0.68
SGSM3-209	ENST00000478085	YES1	P07947	543 aa		10.82	□□□□□ -0.68
SGSM3-209	ENST00000478085	APOBEC1	P41238	236 aa	Known RBP	10.82	□□□□□ -0.68
SGSM3-209	ENST00000478085	SNRPG	P62308	76 aa	Known RBP	10.82	□□□□□ -0.68
SGSM3-209	ENST00000478085	RPL18	Q07020	188 aa	Known RBP	10.82	□□□□□ -0.68
SGSM3-209	ENST00000478085	OXA1L	Q15070	435 aa		10.82	□□□□□ -0.68
SGSM3-209	ENST00000478085	KCNJ8	Q15842	424 aa		10.82	□□□□□ -0.68
SGSM3-209	ENST00000478085	HBM	Q6B0K9	141 aa		10.82	□□□□□ -0.68
SGSM3-209	ENST00000478085	WDR74	Q6RFH5	385 aa	Predicted RBP	10.82	□□□□□ -0.68
SGSM3-209	ENST00000478085	RFT1	Q96AA3	541 aa		10.82	□□□□□ -0.68
SGSM3-209	ENST00000478085	ZNF681	Q96N22	645 aa		10.82	□□□□□ -0.68
SGSM3-209	ENST00000478085	GNRHR2	Q96P88	292 aa		10.82	□□□□□ -0.68
SGSM3-209	ENST00000478085	COA3	Q9Y2R0	106 aa	Predicted RBP	10.82	□□□□□ -0.68
SGSM3-209	ENST00000478085	PCDHGB6	Q9Y5F9	930 aa		10.82	□□□□□ -0.68
SGSM3-209	ENST00000478085	IGHV5-10-1	A0A0J9YXX1	117 aa		10.82	□□□□□ -0.68
SGSM3-209	ENST00000478085	GGT3P	A6NGU5	568 aa		10.82	□□□□□ -0.68
SGSM3-209	ENST00000478085	NCR1	O76036	304 aa		10.82	□□□□□ -0.68
SGSM3-209	ENST00000478085	ERG	P11308	486 aa		10.82	□□□□□ -0.68
SGSM3-209	ENST00000478085	VAMP1	P23763	118 aa		10.82	□□□□□ -0.68
SGSM3-209	ENST00000478085	S100G	P29377	79 aa		10.82	□□□□□ -0.68
SGSM3-209	ENST00000478085	PSG6	Q00889	435 aa		10.82	□□□□□ -0.68
SGSM3-209	ENST00000478085	C3orf33	Q6P1S2	294 aa		10.82	□□□□□ -0.68
SGSM3-209	ENST00000478085	ZNF517	Q6ZMY9	492 aa	Predicted RBP	10.82	□□□□□ -0.68
SGSM3-209	ENST00000478085	HOXB13	Q92826	284 aa	Predicted RBP	10.82	□□□□□ -0.68
SGSM3-209	ENST00000478085	SPTSSA	Q969W0	71 aa		10.82	□□□□□ -0.68
SGSM3-209	ENST00000478085	SLC25A44	Q96H78	314 aa	Predicted RBP	10.82	□□□□□ -0.68
SGSM3-209	ENST00000478085	GABARAPL3	Q9BY60	117 aa		10.82	□□□□□ -0.68
SGSM3-209	ENST00000478085	DUSP21	Q9H596	190 aa		10.82	□□□□□ -0.68
SGSM3-209	ENST00000478085	C20orf141	Q9NUB4	165 aa		10.82	□□□□□ -0.68
SGSM3-209	ENST00000478085	P4HTM	Q9NXG6	502 aa		10.82	□□□□□ -0.68
SGSM3-209	ENST00000478085	ZNF226	Q9NYT6	803 aa		10.82	□□□□□ -0.68
SGSM3-209	ENST00000478085	RASD1	Q9Y272	281 aa		10.82	□□□□□ -0.68
SGSM3-209	ENST00000478085	ZFC3H1	O60293	1989 aa	Known RBP	10.82	□□□□□ -0.68
SGSM3-209	ENST00000478085		A0A1B0GW55	424 aa		10.82	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms