RNA–Protein interactions for RNA: ENST00000477612.5

COL9A3-211, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-211ENST00000477612 WNT11O96014 354 aa19.03■□□□□ 0.64
COL9A3-211ENST00000477612 MT-ATP6P00846 226 aa19.03■□□□□ 0.64
COL9A3-211ENST00000477612 INHBBP09529 407 aa19.03■□□□□ 0.64
COL9A3-211ENST00000477612 HOXB1P14653 301 aaPredicted RBP19.03■□□□□ 0.64
COL9A3-211ENST00000477612 SH3BGRP55822 239 aaPredicted RBP19.03■□□□□ 0.64
COL9A3-211ENST00000477612 LGALS3BPQ08380 585 aa19.03■□□□□ 0.64
COL9A3-211ENST00000477612 TBRG1Q3YBR2 411 aa19.03■□□□□ 0.64
COL9A3-211ENST00000477612 TSPYL5Q86VY4 417 aaPredicted RBP19.03■□□□□ 0.64
COL9A3-211ENST00000477612 RP9Q8TA86 221 aaKnown RBP19.03■□□□□ 0.64
COL9A3-211ENST00000477612 RNF217Q8TC41 542 aa19.03■□□□□ 0.64
COL9A3-211ENST00000477612 BCL2L2Q92843 193 aaPredicted RBP19.03■□□□□ 0.64
COL9A3-211ENST00000477612 MOGAT1Q96PD6 335 aa19.03■□□□□ 0.64
COL9A3-211ENST00000477612 ALKBH3Q96Q83 286 aaPredicted RBP19.03■□□□□ 0.64
COL9A3-211ENST00000477612 BDH2Q9BUT1 245 aa19.03■□□□□ 0.64
COL9A3-211ENST00000477612 GSX1Q9H4S2 264 aaPredicted RBP19.03■□□□□ 0.64
COL9A3-211ENST00000477612 FAIMQ9NVQ4 179 aa19.03■□□□□ 0.64
COL9A3-211ENST00000477612 NF1P21359 2839 aa19.03■□□□□ 0.64
COL9A3-211ENST00000477612 ARPC4-TTLL3A0A0A6YYG9 625 aa19.02■□□□□ 0.64
COL9A3-211ENST00000477612 TRAPPC13A5PLN9 417 aa19.02■□□□□ 0.64
COL9A3-211ENST00000477612 CPSF4LA6NMK7 179 aaKnown RBP19.02■□□□□ 0.64
COL9A3-211ENST00000477612 E7EQL1 145 aa19.02■□□□□ 0.64
COL9A3-211ENST00000477612 M0R1B8 84 aa19.02■□□□□ 0.64
COL9A3-211ENST00000477612 AKAP8O43823 692 aaKnown RBP19.02■□□□□ 0.64
COL9A3-211ENST00000477612 SLC43A1O75387 559 aa19.02■□□□□ 0.64
COL9A3-211ENST00000477612 HPRP00739 348 aa19.02■□□□□ 0.64
COL9A3-211ENST00000477612 CBLP22681 906 aa19.02■□□□□ 0.64
COL9A3-211ENST00000477612 CDH11P55287 796 aa19.02■□□□□ 0.64
COL9A3-211ENST00000477612 ATP5J2P56134 94 aa19.02■□□□□ 0.64
COL9A3-211ENST00000477612 C1DQ13901 141 aaKnown RBP19.02■□□□□ 0.64
COL9A3-211ENST00000477612 WDR88Q6ZMY6 472 aa19.02■□□□□ 0.64
COL9A3-211ENST00000477612 TMEM123Q8N131 208 aa19.02■□□□□ 0.64
COL9A3-211ENST00000477612 PIAS4Q8N2W9 510 aaPredicted RBP19.02■□□□□ 0.64
COL9A3-211ENST00000477612 TRMT61AQ96FX7 289 aaKnown RBP19.02■□□□□ 0.64
COL9A3-211ENST00000477612 MPP4Q96JB8 637 aa19.02■□□□□ 0.64
COL9A3-211ENST00000477612 COX4I2Q96KJ9 171 aa19.02■□□□□ 0.64
COL9A3-211ENST00000477612 ASPNQ9BXN1 380 aa19.02■□□□□ 0.64
COL9A3-211ENST00000477612 SLC19A3Q9BZV2 496 aa19.02■□□□□ 0.64
COL9A3-211ENST00000477612 NELFAQ9H3P2 528 aa19.02■□□□□ 0.64
COL9A3-211ENST00000477612 NIPBLQ6KC79 2804 aaeCLIP19.01■□□□□ 0.63
COL9A3-211ENST00000477612 FAM220BPB1ANY3 271 aa19.01■□□□□ 0.63
COL9A3-211ENST00000477612 SPOCK1Q08629 439 aa19.01■□□□□ 0.63
COL9A3-211ENST00000477612 HIKESHIQ53FT3 197 aa19.01■□□□□ 0.63
COL9A3-211ENST00000477612 ANKRD16Q6P6B7 361 aa19.01■□□□□ 0.63
COL9A3-211ENST00000477612 SLC22A25Q6T423 547 aa19.01■□□□□ 0.63
COL9A3-211ENST00000477612 PXKQ7Z7A4 578 aa19.01■□□□□ 0.63
COL9A3-211ENST00000477612 UEVLDQ8IX04 471 aa19.01■□□□□ 0.63
COL9A3-211ENST00000477612 DEPDC4Q8N2C3 294 aa19.01■□□□□ 0.63
COL9A3-211ENST00000477612 PIK3C3Q8NEB9 887 aa19.01■□□□□ 0.63
COL9A3-211ENST00000477612 VANGL1Q8TAA9 524 aaPredicted RBP19.01■□□□□ 0.63
COL9A3-211ENST00000477612 LRR1Q96L50 414 aa19.01■□□□□ 0.63
COL9A3-211ENST00000477612 OR2M2Q96R28 347 aa19.01■□□□□ 0.63
COL9A3-211ENST00000477612 DHRS9Q9BPW9 319 aa19.01■□□□□ 0.63
COL9A3-211ENST00000477612 PRSS27Q9BQR3 290 aa19.01■□□□□ 0.63
COL9A3-211ENST00000477612 C1QTNF6Q9BXI9 259 aa19.01■□□□□ 0.63
COL9A3-211ENST00000477612 POLR2J2Q9GZM3 115 aaKnown RBP19.01■□□□□ 0.63
COL9A3-211ENST00000477612 POLR2J3Q9H1A7 115 aaKnown RBP19.01■□□□□ 0.63
COL9A3-211ENST00000477612 ARMCX1Q9P291 453 aa19.01■□□□□ 0.63
COL9A3-211ENST00000477612 CRNNQ9UBG3 495 aaPredicted RBP19.01■□□□□ 0.63
COL9A3-211ENST00000477612 BAG5Q9UL15 447 aa19.01■□□□□ 0.63
COL9A3-211ENST00000477612 USP22Q9UPT9 525 aa19.01■□□□□ 0.63
COL9A3-211ENST00000477612 NOX1Q9Y5S8 564 aa19.01■□□□□ 0.63
COL9A3-211ENST00000477612 LRRN3E7EW58 273 aa19■□□□□ 0.63
COL9A3-211ENST00000477612 PLPP3O14495 311 aa19■□□□□ 0.63
COL9A3-211ENST00000477612 CCDC22O60826 627 aa19■□□□□ 0.63
COL9A3-211ENST00000477612 HLA-DOBP13765 273 aa19■□□□□ 0.63
COL9A3-211ENST00000477612 NQO1P15559 274 aaKnown RBP19■□□□□ 0.63
COL9A3-211ENST00000477612 CDH2P19022 906 aaPredicted RBP19■□□□□ 0.63
COL9A3-211ENST00000477612 TTKP33981 857 aa19■□□□□ 0.63
COL9A3-211ENST00000477612 ROR2Q01974 943 aaKnown RBP19■□□□□ 0.63
COL9A3-211ENST00000477612 PUDPQ08623 228 aa19■□□□□ 0.63
COL9A3-211ENST00000477612 PMS2P3Q13401 168 aa19■□□□□ 0.63
COL9A3-211ENST00000477612 ETFDHQ16134 617 aa19■□□□□ 0.63
COL9A3-211ENST00000477612 C3orf36Q3SXR2 165 aa19■□□□□ 0.63
COL9A3-211ENST00000477612 AGAP6Q5VW22 663 aa19■□□□□ 0.63
COL9A3-211ENST00000477612 HMBOX1Q6NT76 420 aa19■□□□□ 0.63
COL9A3-211ENST00000477612 TTC33Q6PID6 262 aaPredicted RBP19■□□□□ 0.63
COL9A3-211ENST00000477612 KLHL24Q6TFL4 600 aa19■□□□□ 0.63
COL9A3-211ENST00000477612 FAM169BQ8N8A8 192 aa19■□□□□ 0.63
COL9A3-211ENST00000477612 OR5J2Q8NH18 312 aa19■□□□□ 0.63
COL9A3-211ENST00000477612 GPR35Q9HC97 309 aa19■□□□□ 0.63
COL9A3-211ENST00000477612 AP3M1Q9Y2T2 418 aa19■□□□□ 0.63
COL9A3-211ENST00000477612 IFNA14P01570 189 aa18.99■□□□□ 0.63
COL9A3-211ENST00000477612 ZP4Q12836 540 aa18.99■□□□□ 0.63
COL9A3-211ENST00000477612 ZNF74Q16587 644 aa18.99■□□□□ 0.63
COL9A3-211ENST00000477612 C11orf71Q6IPW1 123 aa18.99■□□□□ 0.63
COL9A3-211ENST00000477612 ZNF544Q6NX49 715 aa18.99■□□□□ 0.63
COL9A3-211ENST00000477612 B3GLCTQ6Y288 498 aa18.99■□□□□ 0.63
COL9A3-211ENST00000477612 CARM1Q86X55 608 aa18.99■□□□□ 0.63
COL9A3-211ENST00000477612 CIARTQ8N365 385 aaPredicted RBP18.99■□□□□ 0.63
COL9A3-211ENST00000477612 PROX1Q92786 737 aa18.99■□□□□ 0.63
COL9A3-211ENST00000477612 RCN3Q96D15 328 aa18.99■□□□□ 0.63
COL9A3-211ENST00000477612 ALG2Q9H553 416 aa18.99■□□□□ 0.63
COL9A3-211ENST00000477612 FKRPQ9H9S5 495 aa18.99■□□□□ 0.63
COL9A3-211ENST00000477612 MOV10Q9HCE1 1003 aaKnown RBP18.99■□□□□ 0.63
COL9A3-211ENST00000477612 SLC7A7Q9UM01 511 aa18.99■□□□□ 0.63
COL9A3-211ENST00000477612 ARFGEF3Q5TH69 2177 aa18.99■□□□□ 0.63
COL9A3-211ENST00000477612 FAM171A2A8MVW0 826 aa18.98■□□□□ 0.63
COL9A3-211ENST00000477612 KDELR2P33947 212 aa18.98■□□□□ 0.63
COL9A3-211ENST00000477612 CDKN1AP38936 164 aa18.98■□□□□ 0.63
COL9A3-211ENST00000477612 POU3F1Q03052 451 aaPredicted RBP18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms