RNA–Protein interactions for RNA: ENST00000477558.1

VPS45-207, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,425 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-207ENST00000477558 ARSGQ96EG1 525 aa4.68□□□□□ -1.66
VPS45-207ENST00000477558 THOC1Q96FV9 657 aaKnown RBP4.68□□□□□ -1.66
VPS45-207ENST00000477558 AURKBQ96GD4 344 aaPredicted RBP4.68□□□□□ -1.66
VPS45-207ENST00000477558 TRNT1Q96Q11 434 aaKnown RBP4.68□□□□□ -1.66
VPS45-207ENST00000477558 RSPO3Q9BXY4 272 aaPredicted RBP4.68□□□□□ -1.66
VPS45-207ENST00000477558 HOXD1Q9GZZ0 328 aa4.68□□□□□ -1.66
VPS45-207ENST00000477558 BCL2L10Q9HD36 194 aa4.68□□□□□ -1.66
VPS45-207ENST00000477558 A4GALTQ9NPC4 353 aa4.68□□□□□ -1.66
VPS45-207ENST00000477558 EXOSC3Q9NQT5 275 aaKnown RBP4.68□□□□□ -1.66
VPS45-207ENST00000477558 KLRF1Q9NZS2 232 aa4.68□□□□□ -1.66
VPS45-207ENST00000477558 B4GALT7Q9UBV7 327 aa4.68□□□□□ -1.66
VPS45-207ENST00000477558 ZNF69Q9UC07 566 aa4.68□□□□□ -1.66
VPS45-207ENST00000477558 ERRFI1Q9UJM3 462 aaPredicted RBP4.68□□□□□ -1.66
VPS45-207ENST00000477558 FAF1Q9UNN5 650 aaPredicted RBP4.68□□□□□ -1.66
VPS45-207ENST00000477558 LIPT1Q9Y234 373 aa4.68□□□□□ -1.66
VPS45-207ENST00000477558 L3MBTL1Q9Y468 752 aa4.68□□□□□ -1.66
VPS45-207ENST00000477558 FAM215AQ9Y5M1 114 aa4.68□□□□□ -1.66
VPS45-207ENST00000477558 HRNRQ86YZ3 2850 aaPredicted RBP4.68□□□□□ -1.66
VPS45-207ENST00000477558 APCP25054 2843 aa4.68□□□□□ -1.66
VPS45-207ENST00000477558 CSMD2Q7Z408 3487 aa4.67□□□□□ -1.66
VPS45-207ENST00000477558 TRGV5A0A0B4J1U4 118 aa4.67□□□□□ -1.66
VPS45-207ENST00000477558 SERINC4A6NH21 518 aa4.67□□□□□ -1.66
VPS45-207ENST00000477558 BBIP1A8MTZ0 92 aa4.67□□□□□ -1.66
VPS45-207ENST00000477558 FAAHO00519 579 aa4.67□□□□□ -1.66
VPS45-207ENST00000477558 BCKDKO14874 412 aa4.67□□□□□ -1.66
VPS45-207ENST00000477558 HCRTR2O43614 444 aa4.67□□□□□ -1.66
VPS45-207ENST00000477558 BCAS1O75363 584 aaPredicted RBP4.67□□□□□ -1.66
VPS45-207ENST00000477558 STX11O75558 287 aa4.67□□□□□ -1.66
VPS45-207ENST00000477558 KRT75O95678 551 aa4.67□□□□□ -1.66
VPS45-207ENST00000477558 ACTL6AO96019 429 aa4.67□□□□□ -1.66
VPS45-207ENST00000477558 TK1P04183 234 aa4.67□□□□□ -1.66
VPS45-207ENST00000477558 CSF1P09603 554 aa4.67□□□□□ -1.66
VPS45-207ENST00000477558 LINGO3P0C6S8 592 aa4.67□□□□□ -1.66
VPS45-207ENST00000477558 OR12D1P0DN82 309 aa4.67□□□□□ -1.66
VPS45-207ENST00000477558 ETFAP13804 333 aa4.67□□□□□ -1.66
VPS45-207ENST00000477558 CPN1P15169 458 aa4.67□□□□□ -1.66
VPS45-207ENST00000477558 ZNF708P17019 499 aa4.67□□□□□ -1.66
VPS45-207ENST00000477558 PPIBP23284 216 aaKnown RBP4.67□□□□□ -1.66
VPS45-207ENST00000477558 CHMP24386 653 aa4.67□□□□□ -1.66
VPS45-207ENST00000477558 GDF1P27539 372 aa4.67□□□□□ -1.66
VPS45-207ENST00000477558 PGM1P36871 562 aa4.67□□□□□ -1.66
VPS45-207ENST00000477558 LHX2P50458 406 aa4.67□□□□□ -1.66
VPS45-207ENST00000477558 GZMMP51124 257 aa4.67□□□□□ -1.66
VPS45-207ENST00000477558 CRYBA2P53672 197 aa4.67□□□□□ -1.66
VPS45-207ENST00000477558 DSCR4P56555 118 aaPredicted RBP4.67□□□□□ -1.66
VPS45-207ENST00000477558 CLDN18P56856 261 aa4.67□□□□□ -1.66
VPS45-207ENST00000477558 DSTNP60981 165 aa4.67□□□□□ -1.66
VPS45-207ENST00000477558 ADORA2A-AS1P86434 159 aa4.67□□□□□ -1.66
VPS45-207ENST00000477558 PLGLB1Q02325 96 aa4.67□□□□□ -1.66
VPS45-207ENST00000477558 ZNF117Q03924 483 aa4.67□□□□□ -1.66
VPS45-207ENST00000477558 C17orf67Q0P5P2 114 aa4.67□□□□□ -1.66
VPS45-207ENST00000477558 SKP2Q13309 424 aa4.67□□□□□ -1.66
VPS45-207ENST00000477558 SLC10A1Q14973 349 aa4.67□□□□□ -1.66
VPS45-207ENST00000477558 RGNQ15493 299 aa4.67□□□□□ -1.66
VPS45-207ENST00000477558 MAPK14Q16539 360 aa4.67□□□□□ -1.66
VPS45-207ENST00000477558 BCL2A1Q16548 175 aa4.67□□□□□ -1.66
VPS45-207ENST00000477558 C3AR1Q16581 482 aa4.67□□□□□ -1.66
VPS45-207ENST00000477558 ZNF630Q2M218 657 aaPredicted RBP4.67□□□□□ -1.66
VPS45-207ENST00000477558 EIF2S3LQ2VIR3 472 aaKnown RBP4.67□□□□□ -1.66
VPS45-207ENST00000477558 TRMT5Q32P41 509 aaKnown RBP4.67□□□□□ -1.66
VPS45-207ENST00000477558 PLPPR5Q32ZL2 321 aa4.67□□□□□ -1.66
VPS45-207ENST00000477558 AGKQ53H12 422 aa4.67□□□□□ -1.66
VPS45-207ENST00000477558 RUNDC3AQ59EK9 446 aa4.67□□□□□ -1.66
VPS45-207ENST00000477558 DCST1Q5T197 706 aa4.67□□□□□ -1.66
VPS45-207ENST00000477558 MORN5Q5VZ52 161 aa4.67□□□□□ -1.66
VPS45-207ENST00000477558 RTL6Q6ICC9 239 aa4.67□□□□□ -1.66
VPS45-207ENST00000477558 ZNF621Q6ZSS3 439 aa4.67□□□□□ -1.66
VPS45-207ENST00000477558 FAM57BQ71RH2 274 aa4.67□□□□□ -1.66
VPS45-207ENST00000477558 SZRD1Q7Z422 152 aa4.67□□□□□ -1.66
VPS45-207ENST00000477558 SPATA21Q7Z572 469 aa4.67□□□□□ -1.66
VPS45-207ENST00000477558 PIGWQ7Z7B1 504 aa4.67□□□□□ -1.66
VPS45-207ENST00000477558 MARCH3Q86UD3 253 aa4.67□□□□□ -1.66
VPS45-207ENST00000477558 PTOV1Q86YD1 416 aa4.67□□□□□ -1.66
VPS45-207ENST00000477558 DOLPP1Q86YN1 238 aa4.67□□□□□ -1.66
VPS45-207ENST00000477558 GRAMD2AQ8IUY3 354 aa4.67□□□□□ -1.66
VPS45-207ENST00000477558 ZNF619Q8N2I2 560 aa4.67□□□□□ -1.66
VPS45-207ENST00000477558 GTPBP8Q8N3Z3 284 aaPredicted RBP4.67□□□□□ -1.66
VPS45-207ENST00000477558 PAQR4Q8N4S7 273 aaPredicted RBP4.67□□□□□ -1.66
VPS45-207ENST00000477558 ANKFN1Q8N957 763 aa4.67□□□□□ -1.66
VPS45-207ENST00000477558 OR1J4Q8NGS1 313 aa4.67□□□□□ -1.66
VPS45-207ENST00000477558 BCAS4Q8TDM0 211 aa4.67□□□□□ -1.66
VPS45-207ENST00000477558 SLC38A5Q8WUX1 472 aa4.67□□□□□ -1.66
VPS45-207ENST00000477558 RAB8BQ92930 207 aa4.67□□□□□ -1.66
VPS45-207ENST00000477558 SLC35B4Q969S0 331 aa4.67□□□□□ -1.66
VPS45-207ENST00000477558 KTI12Q96EK9 354 aaPredicted RBP4.67□□□□□ -1.66
VPS45-207ENST00000477558 ANKRD27Q96NW4 1050 aa4.67□□□□□ -1.66
VPS45-207ENST00000477558 CGREF1Q99674 301 aa4.67□□□□□ -1.66
VPS45-207ENST00000477558 TREX2Q9BQ50 279 aaPredicted RBP4.67□□□□□ -1.66
VPS45-207ENST00000477558 PIMREGQ9BSJ6 248 aa4.67□□□□□ -1.66
VPS45-207ENST00000477558 CCDC106Q9BWC9 280 aa4.67□□□□□ -1.66
VPS45-207ENST00000477558 UGT2B28Q9BY64 529 aa4.67□□□□□ -1.66
VPS45-207ENST00000477558 TMEM38AQ9H6F2 299 aa4.67□□□□□ -1.66
VPS45-207ENST00000477558 KAT8Q9H7Z6 458 aaKnown RBP4.67□□□□□ -1.66
VPS45-207ENST00000477558 EXD2Q9NVH0 621 aa4.67□□□□□ -1.66
VPS45-207ENST00000477558 THUMPD1Q9NXG2 353 aaKnown RBP4.67□□□□□ -1.66
VPS45-207ENST00000477558 LEF1Q9UJU2 399 aaPredicted RBP4.67□□□□□ -1.66
VPS45-207ENST00000477558 TINAGQ9UJW2 476 aa4.67□□□□□ -1.66
VPS45-207ENST00000477558 GTF2A1LQ9UNN4 478 aa4.67□□□□□ -1.66
VPS45-207ENST00000477558 MEMO1Q9Y316 297 aa4.67□□□□□ -1.66
VPS45-207ENST00000477558 NDUFAF1Q9Y375 327 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms