RNA–Protein interactions for RNA: ENST00000477529.1

SRRT-210, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-210ENST00000477529 C1orf162Q8NEQ5 155 aaPredicted RBP12.38□□□□□ -0.43
SRRT-210ENST00000477529 TMEM255BQ8WV15 326 aa12.38□□□□□ -0.43
SRRT-210ENST00000477529 GEMIN6Q8WXD5 167 aaKnown RBP12.38□□□□□ -0.43
SRRT-210ENST00000477529 HSD17B8Q92506 261 aa12.38□□□□□ -0.43
SRRT-210ENST00000477529 FAM162AQ96A26 154 aa12.38□□□□□ -0.43
SRRT-210ENST00000477529 HSH2DQ96JZ2 352 aa12.38□□□□□ -0.43
SRRT-210ENST00000477529 TMEM204Q9BSN7 226 aa12.38□□□□□ -0.43
SRRT-210ENST00000477529 FKRPQ9H9S5 495 aa12.38□□□□□ -0.43
SRRT-210ENST00000477529 ADA2Q9NZK5 511 aa12.38□□□□□ -0.43
SRRT-210ENST00000477529 NPAP1Q9NZP6 1156 aa12.38□□□□□ -0.43
SRRT-210ENST00000477529 UPB1Q9UBR1 384 aa12.38□□□□□ -0.43
SRRT-210ENST00000477529 RIMS3Q9UJD0 308 aa12.38□□□□□ -0.43
SRRT-210ENST00000477529 ADAM21Q9UKJ8 722 aa12.38□□□□□ -0.43
SRRT-210ENST00000477529 NSD1Q96L73 2696 aaPredicted RBP12.38□□□□□ -0.43
SRRT-210ENST00000477529 ABCA2Q9BZC7 2435 aa12.38□□□□□ -0.43
SRRT-210ENST00000477529 DOCK11Q5JSL3 2073 aa12.38□□□□□ -0.43
SRRT-210ENST00000477529 ABCA1O95477 2261 aa12.37□□□□□ -0.43
SRRT-210ENST00000477529 CIB4A0PJX0 185 aa12.37□□□□□ -0.43
SRRT-210ENST00000477529 ENO4A6NNW6 628 aa12.37□□□□□ -0.43
SRRT-210ENST00000477529 PLPP3O14495 311 aa12.37□□□□□ -0.43
SRRT-210ENST00000477529 ATE1O95260 518 aa12.37□□□□□ -0.43
SRRT-210ENST00000477529 CH25HO95992 272 aa12.37□□□□□ -0.43
SRRT-210ENST00000477529 RAF1P04049 648 aa12.37□□□□□ -0.43
SRRT-210ENST00000477529 IFNW1P05000 195 aa12.37□□□□□ -0.43
SRRT-210ENST00000477529 ASAH2BP0C7U1 165 aa12.37□□□□□ -0.43
SRRT-210ENST00000477529 THRBP10828 461 aa12.37□□□□□ -0.43
SRRT-210ENST00000477529 HSD17B1P14061 328 aa12.37□□□□□ -0.43
SRRT-210ENST00000477529 MPGP29372 298 aa12.37□□□□□ -0.43
SRRT-210ENST00000477529 RBM34P42696 430 aaKnown RBP12.37□□□□□ -0.43
SRRT-210ENST00000477529 NR1H2P55055 460 aa12.37□□□□□ -0.43
SRRT-210ENST00000477529 PMS2P3Q13401 168 aa12.37□□□□□ -0.43
SRRT-210ENST00000477529 KRT72Q14CN4 511 aa12.37□□□□□ -0.43
SRRT-210ENST00000477529 TESK1Q15569 626 aa12.37□□□□□ -0.43
SRRT-210ENST00000477529 IFI44LQ53G44 452 aa12.37□□□□□ -0.43
SRRT-210ENST00000477529 P2RY8Q86VZ1 359 aa12.37□□□□□ -0.43
SRRT-210ENST00000477529 WDFY1Q8IWB7 410 aa12.37□□□□□ -0.43
SRRT-210ENST00000477529 UEVLDQ8IX04 471 aa12.37□□□□□ -0.43
SRRT-210ENST00000477529 OFCC1Q8IZS5 231 aa12.37□□□□□ -0.43
SRRT-210ENST00000477529 TMEM123Q8N131 208 aa12.37□□□□□ -0.43
SRRT-210ENST00000477529 LRRC17Q8N6Y2 441 aa12.37□□□□□ -0.43
SRRT-210ENST00000477529 CCDC197Q8NCU1 140 aa12.37□□□□□ -0.43
SRRT-210ENST00000477529 OR5J2Q8NH18 312 aa12.37□□□□□ -0.43
SRRT-210ENST00000477529 OR52N5Q8NH56 324 aa12.37□□□□□ -0.43
SRRT-210ENST00000477529 PFN4Q8NHR9 129 aa12.37□□□□□ -0.43
SRRT-210ENST00000477529 MUS81Q96NY9 551 aa12.37□□□□□ -0.43
SRRT-210ENST00000477529 LINC00470Q9BZP3 86 aa12.37□□□□□ -0.43
SRRT-210ENST00000477529 NANSQ9NR45 359 aa12.37□□□□□ -0.43
SRRT-210ENST00000477529 MAN2C1Q9NTJ4 1040 aa12.37□□□□□ -0.43
SRRT-210ENST00000477529 C20orf141Q9NUB4 165 aa12.37□□□□□ -0.43
SRRT-210ENST00000477529 CCM2LQ9NUG4 571 aaPredicted RBP12.37□□□□□ -0.43
SRRT-210ENST00000477529 ITGB1BP2Q9UKP3 347 aa12.37□□□□□ -0.43
SRRT-210ENST00000477529 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.37□□□□□ -0.436e-6■□□□□ 11.3
SRRT-210ENST00000477529 MALRD1Q5VYJ5 2156 aa12.36□□□□□ -0.43
SRRT-210ENST00000477529 A0A1W2PR80 420 aa12.36□□□□□ -0.43
SRRT-210ENST00000477529 ZNF587BE7ETH6 402 aa12.36□□□□□ -0.43
SRRT-210ENST00000477529 J3KTA2 159 aa12.36□□□□□ -0.43
SRRT-210ENST00000477529 FFAR1O14842 300 aa12.36□□□□□ -0.43
SRRT-210ENST00000477529 AKAP8O43823 692 aaKnown RBP12.36□□□□□ -0.43
SRRT-210ENST00000477529 PIP5K1CO60331 668 aa12.36□□□□□ -0.43
SRRT-210ENST00000477529 UPK3AO75631 287 aa12.36□□□□□ -0.43
SRRT-210ENST00000477529 PRSS23O95084 383 aa12.36□□□□□ -0.43
SRRT-210ENST00000477529 PLAUP00749 431 aa12.36□□□□□ -0.43
SRRT-210ENST00000477529 MT-ND1P03886 318 aa12.36□□□□□ -0.43
SRRT-210ENST00000477529 ADORA3P0DMS8 318 aa12.36□□□□□ -0.43
SRRT-210ENST00000477529 IL1RL1Q01638 556 aa12.36□□□□□ -0.43
SRRT-210ENST00000477529 C1DQ13901 141 aaKnown RBP12.36□□□□□ -0.43
SRRT-210ENST00000477529 NCMAPQ5T1S8 102 aa12.36□□□□□ -0.43
SRRT-210ENST00000477529 OR7E24Q6IFN5 339 aa12.36□□□□□ -0.43
SRRT-210ENST00000477529 NHLRC1Q6VVB1 395 aa12.36□□□□□ -0.43
SRRT-210ENST00000477529 ZNF704Q6ZNC4 412 aaPredicted RBP12.36□□□□□ -0.43
SRRT-210ENST00000477529 TSEN54Q7Z6J9 526 aaKnown RBP12.36□□□□□ -0.43
SRRT-210ENST00000477529 PXKQ7Z7A4 578 aa12.36□□□□□ -0.43
SRRT-210ENST00000477529 DEFB107AQ8IZN7 70 aa12.36□□□□□ -0.43
SRRT-210ENST00000477529 C17orf78Q8N4C9 275 aa12.36□□□□□ -0.43
SRRT-210ENST00000477529 FAM86B1Q8N7N1 296 aa12.36□□□□□ -0.43
SRRT-210ENST00000477529 TMEM239Q8WW34 195 aa12.36□□□□□ -0.43
SRRT-210ENST00000477529 OR2M2Q96R28 347 aa12.36□□□□□ -0.43
SRRT-210ENST00000477529 NELFAQ9H3P2 528 aa12.36□□□□□ -0.43
SRRT-210ENST00000477529 UBTD1Q9HAC8 227 aa12.36□□□□□ -0.43
SRRT-210ENST00000477529 NGBQ9NPG2 151 aa12.36□□□□□ -0.43
SRRT-210ENST00000477529 MED29Q9NX70 200 aa12.36□□□□□ -0.43
SRRT-210ENST00000477529 CD300AQ9UGN4 299 aa12.36□□□□□ -0.43
SRRT-210ENST00000477529 ZNF229Q9UJW7 825 aa12.36□□□□□ -0.43
SRRT-210ENST00000477529 NOX1Q9Y5S8 564 aa12.36□□□□□ -0.43
SRRT-210ENST00000477529 SLC25A15Q9Y619 301 aa12.36□□□□□ -0.43
SRRT-210ENST00000477529 OR6C65A6NJZ3 312 aa12.35□□□□□ -0.43
SRRT-210ENST00000477529 C11orf98E9PRG8 122 aa12.35□□□□□ -0.43
SRRT-210ENST00000477529 SLC43A1O75387 559 aa12.35□□□□□ -0.43
SRRT-210ENST00000477529 IGF2P01344 180 aa12.35□□□□□ -0.43
SRRT-210ENST00000477529 CD53P19397 219 aa12.35□□□□□ -0.43
SRRT-210ENST00000477529 TCN1P20061 433 aaPredicted RBP12.35□□□□□ -0.43
SRRT-210ENST00000477529 YAP1P46937 504 aaKnown RBP12.35□□□□□ -0.43
SRRT-210ENST00000477529 ART1P52961 327 aa12.35□□□□□ -0.43
SRRT-210ENST00000477529 BSPH1Q075Z2 132 aa12.35□□□□□ -0.43
SRRT-210ENST00000477529 ST3GAL3Q11203 375 aa12.35□□□□□ -0.43
SRRT-210ENST00000477529 SAMD4BQ5PRF9 694 aaKnown RBP12.35□□□□□ -0.43
SRRT-210ENST00000477529 GLYATQ6IB77 296 aa12.35□□□□□ -0.43
SRRT-210ENST00000477529 C16orf89Q6UX73 402 aa12.35□□□□□ -0.43
SRRT-210ENST00000477529 SSX8Q7RTT4 187 aa12.35□□□□□ -0.43
SRRT-210ENST00000477529 NANOGNBQ7Z5D8 188 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms