RNA–Protein interactions for RNA: ENST00000477447.6

TARDBP-208, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-208ENST00000477447 SLC17A9Q9BYT1 436 aa2.06□□□□□ -2.08
TARDBP-208ENST00000477447 VCXQ9H320 206 aa2.06□□□□□ -2.08
TARDBP-208ENST00000477447 IL26Q9NPH9 171 aa2.06□□□□□ -2.08
TARDBP-208ENST00000477447 GLRX2Q9NS18 164 aa2.06□□□□□ -2.08
TARDBP-208ENST00000477447 STOX2Q9P2F5 926 aaPredicted RBP2.06□□□□□ -2.08
TARDBP-208ENST00000477447 ADAM28Q9UKQ2 775 aa2.06□□□□□ -2.08
TARDBP-208ENST00000477447 PSG11Q9UQ72 335 aa2.06□□□□□ -2.08
TARDBP-208ENST00000477447 SCN2AQ99250 2005 aa2.06□□□□□ -2.08
TARDBP-208ENST00000477447 IGLV4-69A0A075B6H9 119 aa2.05□□□□□ -2.08
TARDBP-208ENST00000477447 A0A096LNJ9 63 aa2.05□□□□□ -2.08
TARDBP-208ENST00000477447 C11orf94C9JXX5 98 aa2.05□□□□□ -2.08
TARDBP-208ENST00000477447 SUPT3HO75486 399 aa2.05□□□□□ -2.08
TARDBP-208ENST00000477447 CLDN9O95484 217 aa2.05□□□□□ -2.08
TARDBP-208ENST00000477447 TDGF1P13385 188 aa2.05□□□□□ -2.08
TARDBP-208ENST00000477447 HPGDP15428 266 aa2.05□□□□□ -2.08
TARDBP-208ENST00000477447 TBPP20226 339 aa2.05□□□□□ -2.08
TARDBP-208ENST00000477447 CNR1P21554 472 aa2.05□□□□□ -2.08
TARDBP-208ENST00000477447 GLRA2P23416 452 aa2.05□□□□□ -2.08
TARDBP-208ENST00000477447 HOXA9P31269 272 aa2.05□□□□□ -2.08
TARDBP-208ENST00000477447 LONP1P36776 959 aaKnown RBP2.05□□□□□ -2.08
TARDBP-208ENST00000477447 NMUP48645 174 aa2.05□□□□□ -2.08
TARDBP-208ENST00000477447 TDGF1P3P51864 188 aa2.05□□□□□ -2.08
TARDBP-208ENST00000477447 SUCLG1P53597 346 aaKnown RBP2.05□□□□□ -2.08
TARDBP-208ENST00000477447 CRISP3P54108 245 aa2.05□□□□□ -2.08
TARDBP-208ENST00000477447 FILIP1LQ4L180 1135 aa2.05□□□□□ -2.08
TARDBP-208ENST00000477447 LCN12Q6JVE5 192 aa2.05□□□□□ -2.08
TARDBP-208ENST00000477447 IGFL3Q6UXB1 125 aa2.05□□□□□ -2.08
TARDBP-208ENST00000477447 ZFP2Q6ZN57 461 aa2.05□□□□□ -2.08
TARDBP-208ENST00000477447 DHDDSQ86SQ9 333 aa2.05□□□□□ -2.08
TARDBP-208ENST00000477447 PLA2G4DQ86XP0 818 aa2.05□□□□□ -2.08
TARDBP-208ENST00000477447 NUDCD3Q8IVD9 361 aa2.05□□□□□ -2.08
TARDBP-208ENST00000477447 FAM133AQ8N9E0 248 aa2.05□□□□□ -2.08
TARDBP-208ENST00000477447 DUSP18Q8NEJ0 188 aa2.05□□□□□ -2.08
TARDBP-208ENST00000477447 OR4F15Q8NGB8 312 aa2.05□□□□□ -2.08
TARDBP-208ENST00000477447 OR10G9Q8NGN4 311 aa2.05□□□□□ -2.08
TARDBP-208ENST00000477447 MAGEE2Q8TD90 523 aaPredicted RBP2.05□□□□□ -2.08
TARDBP-208ENST00000477447 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.05□□□□□ -2.087e-6■■■■■ 27.5
TARDBP-208ENST00000477447 C10orf35Q96D05 121 aa2.05□□□□□ -2.08
TARDBP-208ENST00000477447 TMEM43Q9BTV4 400 aa2.05□□□□□ -2.08
TARDBP-208ENST00000477447 RIOK2Q9BVS4 552 aaKnown RBP2.05□□□□□ -2.08
TARDBP-208ENST00000477447 CDC42EP4Q9H3Q1 356 aaKnown RBP2.05□□□□□ -2.08
TARDBP-208ENST00000477447 RANBP3Q9H6Z4 567 aaPredicted RBP2.05□□□□□ -2.08
TARDBP-208ENST00000477447 GORASP2Q9H8Y8 452 aa2.05□□□□□ -2.08
TARDBP-208ENST00000477447 ZFP14Q9HCL3 533 aa2.05□□□□□ -2.08
TARDBP-208ENST00000477447 DMAP1Q9NPF5 467 aaPredicted RBP2.05□□□□□ -2.08
TARDBP-208ENST00000477447 CLEC4AQ9UMR7 237 aa2.05□□□□□ -2.08
TARDBP-208ENST00000477447 PTCH1Q13635 1447 aa2.05□□□□□ -2.08
TARDBP-208ENST00000477447 IGKV2D-24A0A075B6R9 120 aa2.04□□□□□ -2.08
TARDBP-208ENST00000477447 CCDC182A6NF36 153 aa2.04□□□□□ -2.08
TARDBP-208ENST00000477447 GPR89AB7ZAQ6 455 aa2.04□□□□□ -2.08
TARDBP-208ENST00000477447 GOLGA8SH3BPF8 625 aa2.04□□□□□ -2.08
TARDBP-208ENST00000477447 GKN3PP0CG01 181 aa2.04□□□□□ -2.08
TARDBP-208ENST00000477447 GPR89BP0CG08 455 aa2.04□□□□□ -2.08
TARDBP-208ENST00000477447 RPS2P15880 293 aaKnown RBP2.04□□□□□ -2.08
TARDBP-208ENST00000477447 OPRD1P41143 372 aa2.04□□□□□ -2.08
TARDBP-208ENST00000477447 PRPHP41219 470 aa2.04□□□□□ -2.08
TARDBP-208ENST00000477447 CXCL5P42830 114 aa2.04□□□□□ -2.08
TARDBP-208ENST00000477447 GBX2P52951 348 aaPredicted RBP2.04□□□□□ -2.08
TARDBP-208ENST00000477447 ACTA1P68133 377 aa2.04□□□□□ -2.08
TARDBP-208ENST00000477447 SMARCB1Q12824 385 aa2.04□□□□□ -2.08
TARDBP-208ENST00000477447 IL24Q13007 206 aa2.04□□□□□ -2.08
TARDBP-208ENST00000477447 GPM6BQ13491 265 aa2.04□□□□□ -2.08
TARDBP-208ENST00000477447 ZNF691Q5VV52 312 aa2.04□□□□□ -2.08
TARDBP-208ENST00000477447 UQCC3Q6UW78 93 aa2.04□□□□□ -2.08
TARDBP-208ENST00000477447 UTS2BQ765I0 119 aa2.04□□□□□ -2.08
TARDBP-208ENST00000477447 THOC6Q86W42 341 aaKnown RBP2.04□□□□□ -2.08
TARDBP-208ENST00000477447 PNPLA6Q8IY17 1366 aa2.04□□□□□ -2.08
TARDBP-208ENST00000477447 FAM83FQ8NEG4 500 aaPredicted RBP2.04□□□□□ -2.08
TARDBP-208ENST00000477447 OR1N2Q8NGR9 330 aa2.04□□□□□ -2.08
TARDBP-208ENST00000477447 FAM110BQ8TC76 370 aa2.04□□□□□ -2.08
TARDBP-208ENST00000477447 MCOLN3Q8TDD5 553 aa2.04□□□□□ -2.08
TARDBP-208ENST00000477447 PYROXD1Q8WU10 500 aa2.04□□□□□ -2.08
TARDBP-208ENST00000477447 SCFD1Q8WVM8 642 aa2.04□□□□□ -2.08
TARDBP-208ENST00000477447 FGF14Q92915 247 aa2.04□□□□□ -2.08
TARDBP-208ENST00000477447 SMARCD2Q92925 531 aa2.04□□□□□ -2.08
TARDBP-208ENST00000477447 CEP170P1Q96L14 293 aa2.04□□□□□ -2.08
TARDBP-208ENST00000477447 TAAR1Q96RJ0 339 aa2.04□□□□□ -2.08
TARDBP-208ENST00000477447 ECSITQ9BQ95 431 aa2.04□□□□□ -2.08
TARDBP-208ENST00000477447 TRIM62Q9BVG3 475 aa2.04□□□□□ -2.08
TARDBP-208ENST00000477447 VCX2Q9H322 139 aa2.04□□□□□ -2.08
TARDBP-208ENST00000477447 MCCC2Q9HCC0 563 aa2.04□□□□□ -2.08
TARDBP-208ENST00000477447 MRPL47Q9HD33 250 aaKnown RBP2.04□□□□□ -2.08
TARDBP-208ENST00000477447 SLCO1B3Q9NPD5 702 aa2.04□□□□□ -2.08
TARDBP-208ENST00000477447 ZNF226Q9NYT6 803 aa2.04□□□□□ -2.08
TARDBP-208ENST00000477447 RBAKQ9NYW8 714 aaPredicted RBP2.04□□□□□ -2.08
TARDBP-208ENST00000477447 CALYQ9NYX4 217 aa2.04□□□□□ -2.08
TARDBP-208ENST00000477447 PCYOX1Q9UHG3 505 aa2.04□□□□□ -2.08
TARDBP-208ENST00000477447 MTCL1Q9Y4B5 1905 aaKnown RBP2.04□□□□□ -2.08
TARDBP-208ENST00000477447 FANCIQ9NVI1 1328 aa2.03□□□□□ -2.08
TARDBP-208ENST00000477447 IGLV3-22A0A075B6J6 115 aa2.03□□□□□ -2.08
TARDBP-208ENST00000477447 A0A1B0GVL5 298 aa2.03□□□□□ -2.08
TARDBP-208ENST00000477447 PCP4L1A6NKN8 68 aa2.03□□□□□ -2.08
TARDBP-208ENST00000477447 SLC31A2O15432 143 aa2.03□□□□□ -2.08
TARDBP-208ENST00000477447 SS18L1O75177 396 aaPredicted RBP2.03□□□□□ -2.08
TARDBP-208ENST00000477447 SPAG6O75602 509 aa2.03□□□□□ -2.08
TARDBP-208ENST00000477447 CSF3P09919 207 aa2.03□□□□□ -2.08
TARDBP-208ENST00000477447 MAGP20916 626 aa2.03□□□□□ -2.08
TARDBP-208ENST00000477447 SLC2A5P22732 501 aa2.03□□□□□ -2.08
TARDBP-208ENST00000477447 RPS9P46781 194 aaKnown RBP2.03□□□□□ -2.08
TARDBP-208ENST00000477447 HNMTP50135 292 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms