RNA–Protein interactions for RNA: ENST00000477429.1

COL4A5-204, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-204ENST00000477429 OR51F2Q8NH61 342 aa8.34□□□□□ -1.07
COL4A5-204ENST00000477429 RDH5Q92781 318 aa8.34□□□□□ -1.07
COL4A5-204ENST00000477429 PMM1Q92871 262 aa8.34□□□□□ -1.07
COL4A5-204ENST00000477429 PPP3R2Q96LZ3 170 aa8.34□□□□□ -1.07
COL4A5-204ENST00000477429 ANKRD27Q96NW4 1050 aa8.34□□□□□ -1.07
COL4A5-204ENST00000477429 LINC00470Q9BZP3 86 aa8.34□□□□□ -1.07
COL4A5-204ENST00000477429 ZNF665Q9H7R5 613 aa8.34□□□□□ -1.07
COL4A5-204ENST00000477429 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.34□□□□□ -1.07
COL4A5-204ENST00000477429 ATAD3AQ9NVI7 634 aa8.34□□□□□ -1.07
COL4A5-204ENST00000477429 SLC17A7Q9P2U7 560 aa8.34□□□□□ -1.07
COL4A5-204ENST00000477429 FBXO9Q9UK97 447 aaPredicted RBP8.34□□□□□ -1.07
COL4A5-204ENST00000477429 HERC2O95714 4834 aa8.34□□□□□ -1.07
COL4A5-204ENST00000477429 WNK2Q9Y3S1 2297 aa8.34□□□□□ -1.07
COL4A5-204ENST00000477429 CFAP73A6NFT4 308 aa8.33□□□□□ -1.08
COL4A5-204ENST00000477429 SMIM23A6NLE4 172 aa8.33□□□□□ -1.08
COL4A5-204ENST00000477429 M0R233 179 aa8.33□□□□□ -1.08
COL4A5-204ENST00000477429 FAAHO00519 579 aa8.33□□□□□ -1.08
COL4A5-204ENST00000477429 TRIM13O60858 407 aa8.33□□□□□ -1.08
COL4A5-204ENST00000477429 MPZL1O95297 269 aa8.33□□□□□ -1.08
COL4A5-204ENST00000477429 CLPTM1O96005 669 aa8.33□□□□□ -1.08
COL4A5-204ENST00000477429 TFP02787 698 aa8.33□□□□□ -1.08
COL4A5-204ENST00000477429 PATE4P0C8F1 98 aa8.33□□□□□ -1.08
COL4A5-204ENST00000477429 PNMTP11086 282 aa8.33□□□□□ -1.08
COL4A5-204ENST00000477429 HLA-DOBP13765 273 aa8.33□□□□□ -1.08
COL4A5-204ENST00000477429 ZNF14P17017 642 aaPredicted RBP8.33□□□□□ -1.08
COL4A5-204ENST00000477429 PRPS1L1P21108 318 aa8.33□□□□□ -1.08
COL4A5-204ENST00000477429 ACHEP22303 614 aa8.33□□□□□ -1.08
COL4A5-204ENST00000477429 FKBP2P26885 142 aaKnown RBP8.33□□□□□ -1.08
COL4A5-204ENST00000477429 RPL3P39023 403 aaKnown RBP8.33□□□□□ -1.08
COL4A5-204ENST00000477429 CDKN2CP42773 168 aa8.33□□□□□ -1.08
COL4A5-204ENST00000477429 HTR3AP46098 478 aa8.33□□□□□ -1.08
COL4A5-204ENST00000477429 POU3F1Q03052 451 aaPredicted RBP8.33□□□□□ -1.08
COL4A5-204ENST00000477429 CHI3L2Q15782 390 aa8.33□□□□□ -1.08
COL4A5-204ENST00000477429 TMEM255AQ5JRV8 349 aa8.33□□□□□ -1.08
COL4A5-204ENST00000477429 C1orf140Q5VVS0 124 aa8.33□□□□□ -1.08
COL4A5-204ENST00000477429 SHISA2Q6UWI4 295 aa8.33□□□□□ -1.08
COL4A5-204ENST00000477429 NHLRC1Q6VVB1 395 aa8.33□□□□□ -1.08
COL4A5-204ENST00000477429 ZNF836Q6ZNA1 936 aa8.33□□□□□ -1.08
COL4A5-204ENST00000477429 TRMT10CQ7L0Y3 403 aaKnown RBP8.33□□□□□ -1.08
COL4A5-204ENST00000477429 RNF130Q86XS8 419 aa8.33□□□□□ -1.08
COL4A5-204ENST00000477429 TMEM123Q8N131 208 aa8.33□□□□□ -1.08
COL4A5-204ENST00000477429 CLIP4Q8N3C7 705 aa8.33□□□□□ -1.08
COL4A5-204ENST00000477429 PAQR4Q8N4S7 273 aaPredicted RBP8.33□□□□□ -1.08
COL4A5-204ENST00000477429 EPS8L3Q8TE67 593 aaKnown RBP8.33□□□□□ -1.08
COL4A5-204ENST00000477429 NEURL3Q96EH8 262 aa8.33□□□□□ -1.08
COL4A5-204ENST00000477429 TEX37Q96LM6 180 aa8.33□□□□□ -1.08
COL4A5-204ENST00000477429 PPP1R36Q96LQ0 422 aa8.33□□□□□ -1.08
COL4A5-204ENST00000477429 ZNF48Q96MX3 618 aaPredicted RBP8.33□□□□□ -1.08
COL4A5-204ENST00000477429 UNKLQ9H9P5 680 aaKnown RBP8.33□□□□□ -1.08
COL4A5-204ENST00000477429 POLE3Q9NRF9 147 aa8.33□□□□□ -1.08
COL4A5-204ENST00000477429 SLC6A13Q9NSD5 602 aa8.33□□□□□ -1.08
COL4A5-204ENST00000477429 EXD2Q9NVH0 621 aa8.33□□□□□ -1.08
COL4A5-204ENST00000477429 CMAHPQ9Y471 501 aa8.33□□□□□ -1.08
COL4A5-204ENST00000477429 TRAV20A0A0B4J274 112 aa8.32□□□□□ -1.08
COL4A5-204ENST00000477429 RNASET2O00584 256 aaKnown RBP8.32□□□□□ -1.08
COL4A5-204ENST00000477429 LYPLA1O75608 230 aaPredicted RBP8.32□□□□□ -1.08
COL4A5-204ENST00000477429 CHEK2O96017 543 aa8.32□□□□□ -1.08
COL4A5-204ENST00000477429 HPRP00739 348 aa8.32□□□□□ -1.08
COL4A5-204ENST00000477429 ERCC1P07992 297 aaPredicted RBP8.32□□□□□ -1.08
COL4A5-204ENST00000477429 KRT4P19013 534 aa8.32□□□□□ -1.08
COL4A5-204ENST00000477429 PCMT1P22061 227 aa8.32□□□□□ -1.08
COL4A5-204ENST00000477429 UQCRC2P22695 453 aa8.32□□□□□ -1.08
COL4A5-204ENST00000477429 ARR3P36575 388 aa8.32□□□□□ -1.08
COL4A5-204ENST00000477429 LIMS1P48059 325 aa8.32□□□□□ -1.08
COL4A5-204ENST00000477429 ERVS71-1P61550 626 aa8.32□□□□□ -1.08
COL4A5-204ENST00000477429 NAA20P61599 178 aa8.32□□□□□ -1.08
COL4A5-204ENST00000477429 MYBPC1Q00872 1141 aa8.32□□□□□ -1.08
COL4A5-204ENST00000477429 SLC9B1Q4ZJI4 515 aa8.32□□□□□ -1.08
COL4A5-204ENST00000477429 SPRNQ5BIV9 151 aa8.32□□□□□ -1.08
COL4A5-204ENST00000477429 KLF17Q5JT82 389 aaPredicted RBP8.32□□□□□ -1.08
COL4A5-204ENST00000477429 PRAMEF8Q5VWM4 474 aa8.32□□□□□ -1.08
COL4A5-204ENST00000477429 PRAMEF7Q5VXH5 474 aa8.32□□□□□ -1.08
COL4A5-204ENST00000477429 ABHD12BQ7Z5M8 362 aaPredicted RBP8.32□□□□□ -1.08
COL4A5-204ENST00000477429 ZNF584Q8IVC4 421 aa8.32□□□□□ -1.08
COL4A5-204ENST00000477429 CADM2Q8N3J6 435 aa8.32□□□□□ -1.08
COL4A5-204ENST00000477429 PNPT1Q8TCS8 783 aaKnown RBP8.32□□□□□ -1.08
COL4A5-204ENST00000477429 SLC25A36Q96CQ1 311 aa8.32□□□□□ -1.08
COL4A5-204ENST00000477429 KTI12Q96EK9 354 aaPredicted RBP8.32□□□□□ -1.08
COL4A5-204ENST00000477429 OR2M2Q96R28 347 aa8.32□□□□□ -1.08
COL4A5-204ENST00000477429 TSPYL1Q9H0U9 437 aa8.32□□□□□ -1.08
COL4A5-204ENST00000477429 PIF1Q9H611 641 aa8.32□□□□□ -1.08
COL4A5-204ENST00000477429 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.32□□□□□ -1.08
COL4A5-204ENST00000477429 MARCOQ9UEW3 520 aaPredicted RBP8.32□□□□□ -1.08
COL4A5-204ENST00000477429 CDHR4A6H8M9 788 aa8.31□□□□□ -1.08
COL4A5-204ENST00000477429 DNAJC9-AS1A6NH13 148 aa8.31□□□□□ -1.08
COL4A5-204ENST00000477429 A8MVM7 634 aa8.31□□□□□ -1.08
COL4A5-204ENST00000477429 M0R3G1 203 aa8.31□□□□□ -1.08
COL4A5-204ENST00000477429 COPEO14579 308 aa8.31□□□□□ -1.08
COL4A5-204ENST00000477429 TRAF3IP2O43734 574 aaPredicted RBP8.31□□□□□ -1.08
COL4A5-204ENST00000477429 ITM2AO43736 263 aa8.31□□□□□ -1.08
COL4A5-204ENST00000477429 NPHS1O60500 1241 aa8.31□□□□□ -1.08
COL4A5-204ENST00000477429 PRSS23O95084 383 aa8.31□□□□□ -1.08
COL4A5-204ENST00000477429 IGHV2-5P01817 119 aa8.31□□□□□ -1.08
COL4A5-204ENST00000477429 GSNP06396 782 aa8.31□□□□□ -1.08
COL4A5-204ENST00000477429 NUDT17P0C025 328 aa8.31□□□□□ -1.08
COL4A5-204ENST00000477429 TFPTP0C1Z6 253 aa8.31□□□□□ -1.08
COL4A5-204ENST00000477429 CD79AP11912 226 aa8.31□□□□□ -1.08
COL4A5-204ENST00000477429 CXCR1P25024 350 aa8.31□□□□□ -1.08
COL4A5-204ENST00000477429 RPS5P46782 204 aaKnown RBP8.31□□□□□ -1.08
COL4A5-204ENST00000477429 CAPZA2P47755 286 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms