RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 KLHL22Q53GT1 634 aa12.98□□□□□ -0.33
COL4A6-206ENST00000477085 RAET1LQ5VY80 246 aa12.98□□□□□ -0.33
COL4A6-206ENST00000477085 RNLSQ5VYX0 342 aa12.98□□□□□ -0.33
COL4A6-206ENST00000477085 NHLRC1Q6VVB1 395 aa12.98□□□□□ -0.33
COL4A6-206ENST00000477085 H1FNTQ75WM6 255 aaPredicted RBP12.98□□□□□ -0.33
COL4A6-206ENST00000477085 GID4Q8IVV7 300 aa12.98□□□□□ -0.33
COL4A6-206ENST00000477085 FDCSPQ8NFU4 85 aa12.98□□□□□ -0.33
COL4A6-206ENST00000477085 OR51L1Q8NGJ5 315 aa12.98□□□□□ -0.33
COL4A6-206ENST00000477085 SMAP2Q8WU79 429 aaPredicted RBP12.98□□□□□ -0.33
COL4A6-206ENST00000477085 TSSK2Q96PF2 358 aa12.98□□□□□ -0.33
COL4A6-206ENST00000477085 OR5B2Q96R09 309 aa12.98□□□□□ -0.33
COL4A6-206ENST00000477085 SCNM1Q9BWG6 230 aa12.98□□□□□ -0.33
COL4A6-206ENST00000477085 ASPNQ9BXN1 380 aa12.98□□□□□ -0.33
COL4A6-206ENST00000477085 INIPQ9NRY2 104 aa12.98□□□□□ -0.33
COL4A6-206ENST00000477085 ASB6Q9NWX5 421 aa12.98□□□□□ -0.33
COL4A6-206ENST00000477085 H2AFY2Q9P0M6 372 aaPredicted RBP12.98□□□□□ -0.33
COL4A6-206ENST00000477085 NCKAP5O14513 1909 aa12.98□□□□□ -0.33
COL4A6-206ENST00000477085 OR5H15A6NDH6 313 aa12.97□□□□□ -0.33
COL4A6-206ENST00000477085 SNTNA6NMZ2 147 aa12.97□□□□□ -0.33
COL4A6-206ENST00000477085 H0YC42 278 aa12.97□□□□□ -0.33
COL4A6-206ENST00000477085 H7C1C5 153 aa12.97□□□□□ -0.33
COL4A6-206ENST00000477085 DCTN6O00399 190 aa12.97□□□□□ -0.33
COL4A6-206ENST00000477085 SERPINI2O75830 405 aa12.97□□□□□ -0.33
COL4A6-206ENST00000477085 RAB36O95755 333 aa12.97□□□□□ -0.33
COL4A6-206ENST00000477085 LIMS3P0CW19 117 aa12.97□□□□□ -0.33
COL4A6-206ENST00000477085 LIMS4P0CW20 117 aa12.97□□□□□ -0.33
COL4A6-206ENST00000477085 DCKP27707 260 aa12.97□□□□□ -0.33
COL4A6-206ENST00000477085 PSMB9P28065 219 aa12.97□□□□□ -0.33
COL4A6-206ENST00000477085 CD79BP40259 229 aa12.97□□□□□ -0.33
COL4A6-206ENST00000477085 LCN6P62502 163 aa12.97□□□□□ -0.33
COL4A6-206ENST00000477085 RUNX1T1Q06455 604 aa12.97□□□□□ -0.33
COL4A6-206ENST00000477085 ZP4Q12836 540 aa12.97□□□□□ -0.33
COL4A6-206ENST00000477085 MFAP5Q13361 173 aa12.97□□□□□ -0.33
COL4A6-206ENST00000477085 TOMM20Q15388 145 aa12.97□□□□□ -0.33
COL4A6-206ENST00000477085 ACKR1Q16570 336 aa12.97□□□□□ -0.33
COL4A6-206ENST00000477085 LEG1Q6P5S2 330 aa12.97□□□□□ -0.33
COL4A6-206ENST00000477085 NANOGP1Q8N7R0 232 aa12.97□□□□□ -0.33
COL4A6-206ENST00000477085 TMEM99Q8N816 258 aa12.97□□□□□ -0.33
COL4A6-206ENST00000477085 SCAIQ8N9R8 606 aa12.97□□□□□ -0.33
COL4A6-206ENST00000477085 FAM83FQ8NEG4 500 aaPredicted RBP12.97□□□□□ -0.33
COL4A6-206ENST00000477085 OR51G2Q8NGK0 314 aa12.97□□□□□ -0.33
COL4A6-206ENST00000477085 ZNF519Q8TB69 540 aa12.97□□□□□ -0.33
COL4A6-206ENST00000477085 YIPF6Q96EC8 236 aa12.97□□□□□ -0.33
COL4A6-206ENST00000477085 TIMP4Q99727 224 aa12.97□□□□□ -0.33
COL4A6-206ENST00000477085 FAM173AQ9BQD7 235 aa12.97□□□□□ -0.33
COL4A6-206ENST00000477085 CHST11Q9NPF2 352 aa12.97□□□□□ -0.33
COL4A6-206ENST00000477085 ALKBH4Q9NXW9 302 aa12.97□□□□□ -0.33
COL4A6-206ENST00000477085 B3GAT1Q9P2W7 334 aa12.97□□□□□ -0.33
COL4A6-206ENST00000477085 GRHPRQ9UBQ7 328 aa12.97□□□□□ -0.33
COL4A6-206ENST00000477085 CSAG2Q9Y5P2 127 aa12.97□□□□□ -0.33
COL4A6-206ENST00000477085 CORINQ9Y5Q5 1042 aa12.97□□□□□ -0.33
COL4A6-206ENST00000477085 RAMP1O60894 148 aa12.97□□□□□ -0.33
COL4A6-206ENST00000477085 SP1P08047 785 aa12.97□□□□□ -0.33
COL4A6-206ENST00000477085 ZNF17P17021 662 aa12.97□□□□□ -0.33
COL4A6-206ENST00000477085 LIPAP38571 399 aa12.97□□□□□ -0.33
COL4A6-206ENST00000477085 PUDPQ08623 228 aa12.97□□□□□ -0.33
COL4A6-206ENST00000477085 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.97□□□□□ -0.33
COL4A6-206ENST00000477085 DEFB109BQ30KR1 87 aa12.97□□□□□ -0.33
COL4A6-206ENST00000477085 CRTC2Q53ET0 693 aaPredicted RBP12.97□□□□□ -0.33
COL4A6-206ENST00000477085 EMC4Q5J8M3 183 aa12.97□□□□□ -0.33
COL4A6-206ENST00000477085 WIPI1Q5MNZ9 446 aaPredicted RBP12.97□□□□□ -0.33
COL4A6-206ENST00000477085 SLC25A43Q8WUT9 341 aaPredicted RBP12.97□□□□□ -0.33
COL4A6-206ENST00000477085 HAS2Q92819 552 aa12.97□□□□□ -0.33
COL4A6-206ENST00000477085 ISOC1Q96CN7 298 aa12.97□□□□□ -0.33
COL4A6-206ENST00000477085 FUNDC2Q9BWH2 189 aa12.97□□□□□ -0.33
COL4A6-206ENST00000477085 WARS2Q9UGM6 360 aaKnown RBP12.97□□□□□ -0.33
COL4A6-206ENST00000477085 POLHQ9Y253 713 aa12.97□□□□□ -0.33
COL4A6-206ENST00000477085 SPIN1Q9Y657 262 aaPredicted RBP12.97□□□□□ -0.33
COL4A6-206ENST00000477085 MED12Q93074 2177 aa12.97□□□□□ -0.33
COL4A6-206ENST00000477085 CCDC160A6NGH7 325 aa12.96□□□□□ -0.34
COL4A6-206ENST00000477085 ZNF891A8MT65 544 aaPredicted RBP12.96□□□□□ -0.34
COL4A6-206ENST00000477085 FAM171A2A8MVW0 826 aa12.96□□□□□ -0.34
COL4A6-206ENST00000477085 NME2P1O60361 137 aa12.96□□□□□ -0.34
COL4A6-206ENST00000477085 OR6A2O95222 327 aa12.96□□□□□ -0.34
COL4A6-206ENST00000477085 IGHMP01871 453 aa12.96□□□□□ -0.34
COL4A6-206ENST00000477085 IGHA1P01876 353 aa12.96□□□□□ -0.34
COL4A6-206ENST00000477085 CELA3AP09093 270 aa12.96□□□□□ -0.34
COL4A6-206ENST00000477085 SPI1P17947 270 aa12.96□□□□□ -0.34
COL4A6-206ENST00000477085 NME2P22392 152 aa12.96□□□□□ -0.34
COL4A6-206ENST00000477085 TTKP33981 857 aa12.96□□□□□ -0.34
COL4A6-206ENST00000477085 TGFBR2P37173 567 aa12.96□□□□□ -0.34
COL4A6-206ENST00000477085 CLK1P49759 484 aaKnown RBP12.96□□□□□ -0.34
COL4A6-206ENST00000477085 DIO1P49895 249 aa12.96□□□□□ -0.34
COL4A6-206ENST00000477085 OR2B6P58173 313 aa12.96□□□□□ -0.34
COL4A6-206ENST00000477085 TLE3Q04726 772 aa12.96□□□□□ -0.34
COL4A6-206ENST00000477085 KRR1Q13601 381 aaKnown RBP12.96□□□□□ -0.34
COL4A6-206ENST00000477085 MFSD13AQ14CX5 517 aa12.96□□□□□ -0.34
COL4A6-206ENST00000477085 ARMC4Q5T2S8 1044 aa12.96□□□□□ -0.34
COL4A6-206ENST00000477085 LINC01590Q5TEZ4 76 aa12.96□□□□□ -0.34
COL4A6-206ENST00000477085 SLC25A25Q6KCM7 469 aa12.96□□□□□ -0.34
COL4A6-206ENST00000477085 LYPD4Q6UWN0 246 aa12.96□□□□□ -0.34
COL4A6-206ENST00000477085 SLC16A12Q6ZSM3 486 aa12.96□□□□□ -0.34
COL4A6-206ENST00000477085 TMPPEQ6ZT21 453 aa12.96□□□□□ -0.34
COL4A6-206ENST00000477085 LHFPL3Q86UP9 236 aa12.96□□□□□ -0.34
COL4A6-206ENST00000477085 ARIH2OSQ8N7S6 290 aa12.96□□□□□ -0.34
COL4A6-206ENST00000477085 ZNF485Q8NCK3 441 aa12.96□□□□□ -0.34
COL4A6-206ENST00000477085 OR14L1PQ8NHC6 308 aa12.96□□□□□ -0.34
COL4A6-206ENST00000477085 C9orf43Q8TAL5 461 aaPredicted RBP12.96□□□□□ -0.34
COL4A6-206ENST00000477085 MIB2Q96AX9 1013 aa12.96□□□□□ -0.34
COL4A6-206ENST00000477085 NMD3Q96D46 503 aaKnown RBP12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms