RNA–Protein interactions for RNA: ENST00000477069.5

NUP188-205, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 2,941 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-205ENST00000477069 CXCR1P25024 350 aa10.42□□□□□ -0.74
NUP188-205ENST00000477069 IL18Q14116 193 aa10.42□□□□□ -0.74
NUP188-205ENST00000477069 PAMR1Q6UXH9 720 aa10.42□□□□□ -0.74
NUP188-205ENST00000477069 ZNF517Q6ZMY9 492 aaPredicted RBP10.42□□□□□ -0.74
NUP188-205ENST00000477069 WDR5BQ86VZ2 330 aa10.42□□□□□ -0.74
NUP188-205ENST00000477069 CDC20BQ86Y33 519 aa10.42□□□□□ -0.74
NUP188-205ENST00000477069 ZNF511Q8NB15 262 aa10.42□□□□□ -0.74
NUP188-205ENST00000477069 WDR77Q9BQA1 342 aaPredicted RBP10.42□□□□□ -0.74
NUP188-205ENST00000477069 TMEM165Q9HC07 324 aa10.42□□□□□ -0.74
NUP188-205ENST00000477069 PRDM6Q9NQX0 595 aa10.42□□□□□ -0.74
NUP188-205ENST00000477069 PRMT8Q9NR22 394 aaPredicted RBP10.42□□□□□ -0.74
NUP188-205ENST00000477069 RXFP3Q9NSD7 469 aa10.42□□□□□ -0.74
NUP188-205ENST00000477069 GRHPRQ9UBQ7 328 aa10.42□□□□□ -0.74
NUP188-205ENST00000477069 NPFFR2Q9Y5X5 522 aa10.42□□□□□ -0.74
NUP188-205ENST00000477069 TRBV2A0A0J9YWF9 115 aa10.41□□□□□ -0.74
NUP188-205ENST00000477069 TMEM200CA6NKL6 621 aa10.41□□□□□ -0.74
NUP188-205ENST00000477069 VSTM2BA6NLU5 285 aa10.41□□□□□ -0.74
NUP188-205ENST00000477069 KHNYNO15037 678 aaKnown RBP10.41□□□□□ -0.74
NUP188-205ENST00000477069 SCO2O43819 266 aa10.41□□□□□ -0.74
NUP188-205ENST00000477069 GATBO75879 557 aaKnown RBP10.41□□□□□ -0.74
NUP188-205ENST00000477069 ABHD16AO95870 558 aa10.41□□□□□ -0.74
NUP188-205ENST00000477069 MT-ATP6P00846 226 aa10.41□□□□□ -0.74
NUP188-205ENST00000477069 KIR2DL3P43628 341 aa10.41□□□□□ -0.74
NUP188-205ENST00000477069 POLR2HP52434 150 aaKnown RBP10.41□□□□□ -0.74
NUP188-205ENST00000477069 NANOS3P60323 173 aaKnown RBP10.41□□□□□ -0.74
NUP188-205ENST00000477069 QPRTQ15274 297 aa10.41□□□□□ -0.74
NUP188-205ENST00000477069 NKAIN1Q4KMZ8 207 aa10.41□□□□□ -0.74
NUP188-205ENST00000477069 GPR139Q6DWJ6 353 aa10.41□□□□□ -0.74
NUP188-205ENST00000477069 PWWP2BQ6NUJ5 590 aa10.41□□□□□ -0.74
NUP188-205ENST00000477069 IL20RBQ6UXL0 311 aa10.41□□□□□ -0.74
NUP188-205ENST00000477069 ADGRG3Q86Y34 549 aa10.41□□□□□ -0.74
NUP188-205ENST00000477069 OR6V1Q8N148 313 aa10.41□□□□□ -0.74
NUP188-205ENST00000477069 TMED7-TICAM2A0A0A6YYA0 188 aa10.41□□□□□ -0.74
NUP188-205ENST00000477069 CPED1A4D0V7 1026 aa10.41□□□□□ -0.74
NUP188-205ENST00000477069 IDSB3KWA1 339 aa10.41□□□□□ -0.74
NUP188-205ENST00000477069 H7C1C5 153 aa10.41□□□□□ -0.74
NUP188-205ENST00000477069 GPRIN2O60269 458 aa10.41□□□□□ -0.74
NUP188-205ENST00000477069 CPNE3O75131 537 aaKnown RBP10.41□□□□□ -0.74
NUP188-205ENST00000477069 SERPINI2O75830 405 aa10.41□□□□□ -0.74
NUP188-205ENST00000477069 GP1BBP13224 206 aa10.41□□□□□ -0.74
NUP188-205ENST00000477069 RAB3BP20337 219 aa10.41□□□□□ -0.74
NUP188-205ENST00000477069 NPR2P20594 1047 aa10.41□□□□□ -0.74
NUP188-205ENST00000477069 EDNRAP25101 427 aa10.41□□□□□ -0.74
NUP188-205ENST00000477069 ITPKBP27987 946 aa10.41□□□□□ -0.74
NUP188-205ENST00000477069 PSMB10P40306 273 aa10.41□□□□□ -0.74
NUP188-205ENST00000477069 DLX5P56178 289 aa10.41□□□□□ -0.74
NUP188-205ENST00000477069 LCN6P62502 163 aa10.41□□□□□ -0.74
NUP188-205ENST00000477069 SGCBQ16585 318 aa10.41□□□□□ -0.74
NUP188-205ENST00000477069 HLA-BQ31612 363 aa10.41□□□□□ -0.74
NUP188-205ENST00000477069 EEF1A1P5Q5VTE0 462 aa10.41□□□□□ -0.74
NUP188-205ENST00000477069 C16orf47Q6ZP98 133 aaPredicted RBP10.41□□□□□ -0.74
NUP188-205ENST00000477069 RAB43Q86YS6 212 aa10.41□□□□□ -0.74
NUP188-205ENST00000477069 OR4M1Q8NGD0 313 aa10.41□□□□□ -0.74
NUP188-205ENST00000477069 NUBPLQ8TB37 319 aa10.41□□□□□ -0.74
NUP188-205ENST00000477069 RGP1Q92546 391 aaPredicted RBP10.41□□□□□ -0.74
NUP188-205ENST00000477069 MRPL48Q96GC5 212 aaKnown RBP10.41□□□□□ -0.74
NUP188-205ENST00000477069 PDCD1LG2Q9BQ51 273 aa10.41□□□□□ -0.74
NUP188-205ENST00000477069 MMP28Q9H239 520 aa10.41□□□□□ -0.74
NUP188-205ENST00000477069 EXTL2Q9UBQ6 330 aa10.41□□□□□ -0.74
NUP188-205ENST00000477069 TMED7Q9Y3B3 224 aa10.41□□□□□ -0.74
NUP188-205ENST00000477069 A0A0B4J293 547 aa10.4□□□□□ -0.74
NUP188-205ENST00000477069 A0A0G2JMP0 313 aa10.4□□□□□ -0.74
NUP188-205ENST00000477069 A0A0X1KG70 313 aa10.4□□□□□ -0.74
NUP188-205ENST00000477069 LINC00854A0A1B0GVQ3 168 aa10.4□□□□□ -0.74
NUP188-205ENST00000477069 ANKRD61A6NGH8 418 aa10.4□□□□□ -0.74
NUP188-205ENST00000477069 SUSD5O60279 629 aa10.4□□□□□ -0.74
NUP188-205ENST00000477069 UPK3AO75631 287 aa10.4□□□□□ -0.74
NUP188-205ENST00000477069 SCRG1O75711 98 aa10.4□□□□□ -0.74
NUP188-205ENST00000477069 RBMS1P29558 406 aaKnown RBP10.4□□□□□ -0.74
NUP188-205ENST00000477069 GRPRP30550 384 aa10.4□□□□□ -0.74
NUP188-205ENST00000477069 SLC26A5P58743 744 aa10.4□□□□□ -0.74
NUP188-205ENST00000477069 PEAR1Q5VY43 1037 aaPredicted RBP10.4□□□□□ -0.74
NUP188-205ENST00000477069 GRINAQ7Z429 371 aa10.4□□□□□ -0.74
NUP188-205ENST00000477069 SCAIQ8N9R8 606 aa10.4□□□□□ -0.74
NUP188-205ENST00000477069 OR4M2Q8NGB6 313 aa10.4□□□□□ -0.74
NUP188-205ENST00000477069 ZNF519Q8TB69 540 aa10.4□□□□□ -0.74
NUP188-205ENST00000477069 HGDQ93099 445 aa10.4□□□□□ -0.74
NUP188-205ENST00000477069 CCDC74BQ96LY2 380 aa10.4□□□□□ -0.74
NUP188-205ENST00000477069 OR14A2Q96R54 314 aa10.4□□□□□ -0.74
NUP188-205ENST00000477069 MRM2Q9UI43 246 aaKnown RBP10.4□□□□□ -0.74
NUP188-205ENST00000477069 PIN1P1O15428 100 aa10.4□□□□□ -0.74
NUP188-205ENST00000477069 ALOX12BO75342 701 aa10.4□□□□□ -0.74
NUP188-205ENST00000477069 IGHMP01871 453 aa10.4□□□□□ -0.74
NUP188-205ENST00000477069 TFPIP10646 304 aa10.4□□□□□ -0.74
NUP188-205ENST00000477069 PSKH1P11801 424 aa10.4□□□□□ -0.74
NUP188-205ENST00000477069 ATF1P18846 271 aa10.4□□□□□ -0.74
NUP188-205ENST00000477069 SLC6A19Q695T7 634 aa10.4□□□□□ -0.74
NUP188-205ENST00000477069 OVCH1Q7RTY7 1134 aa10.4□□□□□ -0.74
NUP188-205ENST00000477069 MISPQ8IVT2 679 aa10.4□□□□□ -0.74
NUP188-205ENST00000477069 OR6F1Q8NGZ6 308 aa10.4□□□□□ -0.74
NUP188-205ENST00000477069 TRMT10AQ8TBZ6 339 aaKnown RBP10.4□□□□□ -0.74
NUP188-205ENST00000477069 PHYHIPQ92561 330 aa10.4□□□□□ -0.74
NUP188-205ENST00000477069 TRIM63Q969Q1 353 aa10.4□□□□□ -0.74
NUP188-205ENST00000477069 MAP6Q96JE9 813 aa10.4□□□□□ -0.74
NUP188-205ENST00000477069 SNX18Q96RF0 628 aa10.4□□□□□ -0.74
NUP188-205ENST00000477069 NDEL1Q9GZM8 345 aa10.4□□□□□ -0.74
NUP188-205ENST00000477069 ANKRD10Q9NXR5 420 aa10.4□□□□□ -0.74
NUP188-205ENST00000477069 PI4KAP42356 2102 aa10.4□□□□□ -0.74
NUP188-205ENST00000477069 NOTOA8MTQ0 251 aa10.4□□□□□ -0.75
NUP188-205ENST00000477069 FAM25AB3EWG3 89 aa10.4□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms