RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 DAZ3Q9NR90 486 aaKnown RBP4.09□□□□□ -1.75
VPS50-212ENST00000476413 SLC2A8Q9NY64 477 aa4.09□□□□□ -1.75
VPS50-212ENST00000476413 IKZF2Q9UKS7 526 aa4.09□□□□□ -1.75
VPS50-212ENST00000476413 ZNF256Q9Y2P7 627 aaPredicted RBP4.09□□□□□ -1.75
VPS50-212ENST00000476413 PLEKHG1Q9ULL1 1385 aa4.09□□□□□ -1.75
VPS50-212ENST00000476413 ARHGAP23Q9P227 1491 aa4.09□□□□□ -1.75
VPS50-212ENST00000476413 ZNF318Q5VUA4 2279 aa4.09□□□□□ -1.76
VPS50-212ENST00000476413 A8MUA0 341 aa4.08□□□□□ -1.76
VPS50-212ENST00000476413 KLLNB2CW77 178 aa4.08□□□□□ -1.76
VPS50-212ENST00000476413 C12orf77C9JDV5 145 aa4.08□□□□□ -1.76
VPS50-212ENST00000476413 TRAF3IP2O43734 574 aaPredicted RBP4.08□□□□□ -1.76
VPS50-212ENST00000476413 CIB2O75838 187 aa4.08□□□□□ -1.76
VPS50-212ENST00000476413 BBOX1O75936 387 aa4.08□□□□□ -1.76
VPS50-212ENST00000476413 IGHV2-5P01817 119 aa4.08□□□□□ -1.76
VPS50-212ENST00000476413 HPNP05981 417 aa4.08□□□□□ -1.76
VPS50-212ENST00000476413 CHTF8P0CG12 524 aa4.08□□□□□ -1.76
VPS50-212ENST00000476413 MCF2P10911 925 aa4.08□□□□□ -1.76
VPS50-212ENST00000476413 ZNF43P17038 809 aa4.08□□□□□ -1.76
VPS50-212ENST00000476413 ELK1P19419 428 aa4.08□□□□□ -1.76
VPS50-212ENST00000476413 RGS19P49795 217 aa4.08□□□□□ -1.76
VPS50-212ENST00000476413 TAS2R19P59542 299 aa4.08□□□□□ -1.76
VPS50-212ENST00000476413 ACVR1Q04771 509 aa4.08□□□□□ -1.76
VPS50-212ENST00000476413 SRSF5Q13243 272 aaKnown RBP4.08□□□□□ -1.76
VPS50-212ENST00000476413 NSDHLQ15738 373 aa4.08□□□□□ -1.76
VPS50-212ENST00000476413 TRIM40Q6P9F5 258 aa4.08□□□□□ -1.76
VPS50-212ENST00000476413 C19orf35Q6ZS72 473 aa4.08□□□□□ -1.76
VPS50-212ENST00000476413 PAQR7Q86WK9 346 aa4.08□□□□□ -1.76
VPS50-212ENST00000476413 MFSD6LQ8IWD5 586 aa4.08□□□□□ -1.76
VPS50-212ENST00000476413 PNKDQ8N490 385 aa4.08□□□□□ -1.76
VPS50-212ENST00000476413 FNDC5Q8NAU1 212 aa4.08□□□□□ -1.76
VPS50-212ENST00000476413 OR2L5Q8NG80 312 aa4.08□□□□□ -1.76
VPS50-212ENST00000476413 ACOT11Q8WXI4 607 aaPredicted RBP4.08□□□□□ -1.76
VPS50-212ENST00000476413 FCRL1Q96LA6 429 aa4.08□□□□□ -1.76
VPS50-212ENST00000476413 IFT74Q96LB3 600 aa4.08□□□□□ -1.76
VPS50-212ENST00000476413 NUP58Q9BVL2 599 aa4.08□□□□□ -1.76
VPS50-212ENST00000476413 RIOK2Q9BVS4 552 aaKnown RBP4.08□□□□□ -1.76
VPS50-212ENST00000476413 CDHR2Q9BYE9 1310 aa4.08□□□□□ -1.76
VPS50-212ENST00000476413 CTNNA3Q9UI47 895 aa4.08□□□□□ -1.76
VPS50-212ENST00000476413 MEGF6O75095 1541 aa4.07□□□□□ -1.76
VPS50-212ENST00000476413 CTAGE15A4D2H0 777 aa4.07□□□□□ -1.76
VPS50-212ENST00000476413 PANO1I0J062 215 aa4.07□□□□□ -1.76
VPS50-212ENST00000476413 FAM189A1O60320 539 aa4.07□□□□□ -1.76
VPS50-212ENST00000476413 PABPC4LP0CB38 370 aaKnown RBP4.07□□□□□ -1.76
VPS50-212ENST00000476413 CTRLP40313 264 aa4.07□□□□□ -1.76
VPS50-212ENST00000476413 NPBWR2P48146 333 aa4.07□□□□□ -1.76
VPS50-212ENST00000476413 NUP107P57740 925 aa4.07□□□□□ -1.76
VPS50-212ENST00000476413 KCNJ2P63252 427 aa4.07□□□□□ -1.76
VPS50-212ENST00000476413 PDIA2Q13087 525 aaKnown RBP4.07□□□□□ -1.76
VPS50-212ENST00000476413 ORC2Q13416 577 aaPredicted RBP4.07□□□□□ -1.76
VPS50-212ENST00000476413 CUL2Q13617 745 aa4.07□□□□□ -1.76
VPS50-212ENST00000476413 ARMC12Q5T9G4 340 aa4.07□□□□□ -1.76
VPS50-212ENST00000476413 GPR157Q5UAW9 335 aa4.07□□□□□ -1.76
VPS50-212ENST00000476413 TMEM107Q6UX40 140 aa4.07□□□□□ -1.76
VPS50-212ENST00000476413 LRRC74BQ6ZQY2 392 aa4.07□□□□□ -1.76
VPS50-212ENST00000476413 Q6ZSR3 168 aa4.07□□□□□ -1.76
VPS50-212ENST00000476413 ASCL5Q7RTU5 278 aa4.07□□□□□ -1.76
VPS50-212ENST00000476413 CTAGE6Q86UF2 777 aa4.07□□□□□ -1.76
VPS50-212ENST00000476413 SMARCD2Q92925 531 aa4.07□□□□□ -1.76
VPS50-212ENST00000476413 OR8B4Q96RC9 309 aa4.07□□□□□ -1.76
VPS50-212ENST00000476413 GBA3Q9H227 469 aa4.07□□□□□ -1.76
VPS50-212ENST00000476413 SRMSQ9H3Y6 488 aa4.07□□□□□ -1.76
VPS50-212ENST00000476413 INPP5EQ9NRR6 644 aa4.07□□□□□ -1.76
VPS50-212ENST00000476413 KCNIP1Q9NZI2 227 aa4.07□□□□□ -1.76
VPS50-212ENST00000476413 MTRF1LQ9UGC7 380 aaKnown RBP4.07□□□□□ -1.76
VPS50-212ENST00000476413 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.06□□□□□ -1.76
VPS50-212ENST00000476413 HEATR9A2RTY3 570 aa4.06□□□□□ -1.76
VPS50-212ENST00000476413 CCDC182A6NF36 153 aa4.06□□□□□ -1.76
VPS50-212ENST00000476413 OR2AG2A6NM03 316 aa4.06□□□□□ -1.76
VPS50-212ENST00000476413 PSTPIP1O43586 416 aa4.06□□□□□ -1.76
VPS50-212ENST00000476413 SERPIND1P05546 499 aa4.06□□□□□ -1.76
VPS50-212ENST00000476413 CMA1P23946 247 aa4.06□□□□□ -1.76
VPS50-212ENST00000476413 HTR1EP28566 365 aa4.06□□□□□ -1.76
VPS50-212ENST00000476413 FBXW4P57775 412 aa4.06□□□□□ -1.76
VPS50-212ENST00000476413 PRPS1P60891 318 aa4.06□□□□□ -1.76
VPS50-212ENST00000476413 ARFRP1Q13795 201 aa4.06□□□□□ -1.76
VPS50-212ENST00000476413 NRF1Q16656 503 aa4.06□□□□□ -1.76
VPS50-212ENST00000476413 HSP90AB3PQ58FF7 597 aa4.06□□□□□ -1.76
VPS50-212ENST00000476413 METAP1DQ6UB28 335 aaPredicted RBP4.06□□□□□ -1.76
VPS50-212ENST00000476413 PRR22Q8IZ63 422 aa4.06□□□□□ -1.76
VPS50-212ENST00000476413 PLPPR1Q8TBJ4 325 aa4.06□□□□□ -1.76
VPS50-212ENST00000476413 FAM151AQ8WW52 585 aa4.06□□□□□ -1.76
VPS50-212ENST00000476413 UCN3Q969E3 161 aa4.06□□□□□ -1.76
VPS50-212ENST00000476413 SORT1Q99523 831 aa4.06□□□□□ -1.76
VPS50-212ENST00000476413 PELOQ9BRX2 385 aaKnown RBP4.06□□□□□ -1.76
VPS50-212ENST00000476413 OR11A1Q9GZK7 315 aa4.06□□□□□ -1.76
VPS50-212ENST00000476413 MFFQ9GZY8 342 aa4.06□□□□□ -1.76
VPS50-212ENST00000476413 NXF3Q9H4D5 531 aaKnown RBP4.06□□□□□ -1.76
VPS50-212ENST00000476413 ADAP2Q9NPF8 381 aa4.06□□□□□ -1.76
VPS50-212ENST00000476413 IL26Q9NPH9 171 aa4.06□□□□□ -1.76
VPS50-212ENST00000476413 CCL28Q9NRJ3 127 aa4.06□□□□□ -1.76
VPS50-212ENST00000476413 CALYQ9NYX4 217 aa4.06□□□□□ -1.76
VPS50-212ENST00000476413 FANCIQ9NVI1 1328 aa4.05□□□□□ -1.76
VPS50-212ENST00000476413 LTBP1Q14766 1721 aa4.05□□□□□ -1.76
VPS50-212ENST00000476413 ZNF861PO60384 105 aa4.05□□□□□ -1.76
VPS50-212ENST00000476413 ACTL6AO96019 429 aa4.05□□□□□ -1.76
VPS50-212ENST00000476413 IGLV1-47P01700 117 aa4.05□□□□□ -1.76
VPS50-212ENST00000476413 ICAM2P13598 275 aa4.05□□□□□ -1.76
VPS50-212ENST00000476413 PSG7Q13046 419 aa4.05□□□□□ -1.76
VPS50-212ENST00000476413 CYTH1Q15438 398 aa4.05□□□□□ -1.76
VPS50-212ENST00000476413 XKR7Q5GH72 579 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms