RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 S100A13Q99584 98 aa4.58□□□□□ -1.68
CCDC39-204ENST00000476379 ADAT1Q9BUB4 502 aaKnown RBP4.58□□□□□ -1.68
CCDC39-204ENST00000476379 C20orf24Q9BUV8 137 aa4.58□□□□□ -1.68
CCDC39-204ENST00000476379 CPEB1Q9BZB8 566 aaKnown RBP4.58□□□□□ -1.68
CCDC39-204ENST00000476379 COMMD4Q9H0A8 199 aa4.58□□□□□ -1.68
CCDC39-204ENST00000476379 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.58□□□□□ -1.68
CCDC39-204ENST00000476379 OR52A5Q9H2C5 316 aa4.58□□□□□ -1.68
CCDC39-204ENST00000476379 RXFP3Q9NSD7 469 aa4.58□□□□□ -1.68
CCDC39-204ENST00000476379 SLC39A1Q9NY26 324 aa4.58□□□□□ -1.68
CCDC39-204ENST00000476379 ACTR10Q9NZ32 417 aa4.58□□□□□ -1.68
CCDC39-204ENST00000476379 KLK4Q9Y5K2 254 aa4.58□□□□□ -1.68
CCDC39-204ENST00000476379 FRMPD3Q5JV73 1810 aa4.58□□□□□ -1.68
CCDC39-204ENST00000476379 KALRNO60229 2985 aa4.58□□□□□ -1.68
CCDC39-204ENST00000476379 FLNBO75369 2602 aaKnown RBP4.58□□□□□ -1.68
CCDC39-204ENST00000476379 FAM221AA4D161 298 aa4.58□□□□□ -1.68
CCDC39-204ENST00000476379 ZNF878C9JN71 531 aa4.58□□□□□ -1.68
CCDC39-204ENST00000476379 H0YIG0 161 aa4.58□□□□□ -1.68
CCDC39-204ENST00000476379 SCDO00767 359 aa4.58□□□□□ -1.68
CCDC39-204ENST00000476379 SEC14L5O43304 696 aa4.58□□□□□ -1.68
CCDC39-204ENST00000476379 HCRTR1O43613 425 aa4.58□□□□□ -1.68
CCDC39-204ENST00000476379 ZNF780AO75290 641 aaPredicted RBP4.58□□□□□ -1.68
CCDC39-204ENST00000476379 SLC22A5O76082 557 aa4.58□□□□□ -1.68
CCDC39-204ENST00000476379 IGHV3-9P01782 118 aa4.58□□□□□ -1.68
CCDC39-204ENST00000476379 ZNF823P16415 610 aa4.58□□□□□ -1.68
CCDC39-204ENST00000476379 ITGB7P26010 798 aa4.58□□□□□ -1.68
CCDC39-204ENST00000476379 SLC6A6P31641 620 aa4.58□□□□□ -1.68
CCDC39-204ENST00000476379 GUCA1AP43080 201 aaPredicted RBP4.58□□□□□ -1.68
CCDC39-204ENST00000476379 RAB40BQ12829 278 aa4.58□□□□□ -1.68
CCDC39-204ENST00000476379 TOR2AQ5JU69 321 aa4.58□□□□□ -1.68
CCDC39-204ENST00000476379 MEDAGQ5VYS4 303 aa4.58□□□□□ -1.68
CCDC39-204ENST00000476379 CBLN3Q6UW01 205 aa4.58□□□□□ -1.68
CCDC39-204ENST00000476379 CLEC9AQ6UXN8 241 aa4.58□□□□□ -1.68
CCDC39-204ENST00000476379 ABHD13Q7L211 337 aa4.58□□□□□ -1.68
CCDC39-204ENST00000476379 MEPCEQ7L2J0 689 aaKnown RBP4.58□□□□□ -1.68
CCDC39-204ENST00000476379 ATCAYQ86WG3 371 aa4.58□□□□□ -1.68
CCDC39-204ENST00000476379 GDPD1Q8N9F7 314 aa4.58□□□□□ -1.68
CCDC39-204ENST00000476379 GALNT6Q8NCL4 622 aa4.58□□□□□ -1.68
CCDC39-204ENST00000476379 OR10K1Q8NGX5 313 aa4.58□□□□□ -1.68
CCDC39-204ENST00000476379 ANGPTL6Q8NI99 470 aa4.58□□□□□ -1.68
CCDC39-204ENST00000476379 DHRS1Q96LJ7 313 aa4.58□□□□□ -1.68
CCDC39-204ENST00000476379 SDHCQ99643 169 aaPredicted RBP4.58□□□□□ -1.68
CCDC39-204ENST00000476379 GABARAPL3Q9BY60 117 aa4.58□□□□□ -1.68
CCDC39-204ENST00000476379 METTL8Q9H825 291 aaKnown RBP4.58□□□□□ -1.68
CCDC39-204ENST00000476379 SIRT3Q9NTG7 399 aaPredicted RBP4.58□□□□□ -1.68
CCDC39-204ENST00000476379 ICKQ9UPZ9 632 aa4.58□□□□□ -1.68
CCDC39-204ENST00000476379 ZNF407Q9C0G0 2248 aa4.58□□□□□ -1.68
CCDC39-204ENST00000476379 TRABD2BA6NFA1 517 aa4.58□□□□□ -1.68
CCDC39-204ENST00000476379 RHPN2P1A8MT19 583 aa4.58□□□□□ -1.68
CCDC39-204ENST00000476379 K7EQS6 105 aa4.58□□□□□ -1.68
CCDC39-204ENST00000476379 RBBP9O75884 186 aa4.58□□□□□ -1.68
CCDC39-204ENST00000476379 HCKP08631 526 aa4.58□□□□□ -1.68
CCDC39-204ENST00000476379 ITGA5P08648 1049 aa4.58□□□□□ -1.68
CCDC39-204ENST00000476379 HNRNPA1P09651 372 aaKnown RBP eCLIP4.58□□□□□ -1.68
CCDC39-204ENST00000476379 ST6GAL1P15907 406 aa4.58□□□□□ -1.68
CCDC39-204ENST00000476379 NDUFS1P28331 727 aa4.58□□□□□ -1.68
CCDC39-204ENST00000476379 FXYD4P59646 89 aa4.58□□□□□ -1.68
CCDC39-204ENST00000476379 TSPAN31Q12999 210 aa4.58□□□□□ -1.68
CCDC39-204ENST00000476379 ETFDHQ16134 617 aa4.58□□□□□ -1.68
CCDC39-204ENST00000476379 MAMSTRQ6ZN01 415 aa4.58□□□□□ -1.68
CCDC39-204ENST00000476379 FAM109AQ8N4B1 249 aa4.58□□□□□ -1.68
CCDC39-204ENST00000476379 CAMKVQ8NCB2 501 aa4.58□□□□□ -1.68
CCDC39-204ENST00000476379 TMEM52Q8NDY8 209 aa4.58□□□□□ -1.68
CCDC39-204ENST00000476379 OR13H1Q8NG92 308 aa4.58□□□□□ -1.68
CCDC39-204ENST00000476379 OR51A4Q8NGJ6 313 aa4.58□□□□□ -1.68
CCDC39-204ENST00000476379 OR51S1Q8NGJ8 323 aa4.58□□□□□ -1.68
CCDC39-204ENST00000476379 TSLPQ969D9 159 aa4.58□□□□□ -1.68
CCDC39-204ENST00000476379 FATE1Q969F0 183 aa4.58□□□□□ -1.68
CCDC39-204ENST00000476379 TOMM40LQ969M1 308 aa4.58□□□□□ -1.68
CCDC39-204ENST00000476379 SGTBQ96EQ0 304 aa4.58□□□□□ -1.68
CCDC39-204ENST00000476379 ST6GALNAC5Q9BVH7 336 aa4.58□□□□□ -1.68
CCDC39-204ENST00000476379 IFT46Q9NQC8 304 aa4.58□□□□□ -1.68
CCDC39-204ENST00000476379 KLRF1Q9NZS2 232 aa4.58□□□□□ -1.68
CCDC39-204ENST00000476379 MLXQ9UH92 298 aa4.58□□□□□ -1.68
CCDC39-204ENST00000476379 UBQLN2Q9UHD9 624 aa4.58□□□□□ -1.68
CCDC39-204ENST00000476379 ELF5Q9UKW6 265 aaPredicted RBP4.58□□□□□ -1.68
CCDC39-204ENST00000476379 MAB21L2Q9Y586 359 aa4.58□□□□□ -1.68
CCDC39-204ENST00000476379 INTS1Q8N201 2190 aaKnown RBP4.58□□□□□ -1.68
CCDC39-204ENST00000476379 C17orf105B2RV13 164 aa4.58□□□□□ -1.68
CCDC39-204ENST00000476379 TMEM150CB9EJG8 249 aa4.58□□□□□ -1.68
CCDC39-204ENST00000476379 F5H5K5 113 aa4.58□□□□□ -1.68
CCDC39-204ENST00000476379 ALOX12BO75342 701 aa4.58□□□□□ -1.68
CCDC39-204ENST00000476379 ARL6IP5O75915 188 aa4.58□□□□□ -1.68
CCDC39-204ENST00000476379 MPZL1O95297 269 aa4.58□□□□□ -1.68
CCDC39-204ENST00000476379 LGI1O95970 557 aa4.58□□□□□ -1.68
CCDC39-204ENST00000476379 IL1AP01583 271 aa4.58□□□□□ -1.68
CCDC39-204ENST00000476379 ZNF806P0C7X5 589 aa4.58□□□□□ -1.68
CCDC39-204ENST00000476379 THEGLP0DJG4 465 aa4.58□□□□□ -1.68
CCDC39-204ENST00000476379 UGT2B7P16662 529 aa4.58□□□□□ -1.68
CCDC39-204ENST00000476379 NUP62P37198 522 aaPredicted RBP4.58□□□□□ -1.68
CCDC39-204ENST00000476379 SELENOPP49908 381 aa4.58□□□□□ -1.68
CCDC39-204ENST00000476379 GFERP55789 205 aa4.58□□□□□ -1.68
CCDC39-204ENST00000476379 RPS21P63220 83 aaKnown RBP4.58□□□□□ -1.68
CCDC39-204ENST00000476379 GPR50Q13585 617 aa4.58□□□□□ -1.68
CCDC39-204ENST00000476379 EXOSC2Q13868 293 aaKnown RBP4.58□□□□□ -1.68
CCDC39-204ENST00000476379 ZNF800Q2TB10 664 aaPredicted RBP eCLIP4.58□□□□□ -1.68
CCDC39-204ENST00000476379 SLC22A6Q4U2R8 563 aa4.58□□□□□ -1.68
CCDC39-204ENST00000476379 ALG10Q5BKT4 473 aa4.58□□□□□ -1.68
CCDC39-204ENST00000476379 RNLSQ5VYX0 342 aa4.58□□□□□ -1.68
CCDC39-204ENST00000476379 LCTLQ6UWM7 567 aa4.58□□□□□ -1.68
CCDC39-204ENST00000476379 ZNF687Q8N1G0 1237 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms