RNA–Protein interactions for RNA: ENST00000475551.5

CCM2-207, Transcript of CCM2 scaffold protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCM2, Length 2,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-207ENST00000475551 OR4K13Q8NH42 304 aa16.23■□□□□ 0.19
CCM2-207ENST00000475551 COX14Q96I36 57 aa16.23■□□□□ 0.19
CCM2-207ENST00000475551 ERVK-19Q9WJR5 959 aa16.23■□□□□ 0.19
CCM2-207ENST00000475551 OR2F2O95006 317 aa16.23■□□□□ 0.19
CCM2-207ENST00000475551 EPCAMP16422 314 aa16.23■□□□□ 0.19
CCM2-207ENST00000475551 NANOS3P60323 173 aaKnown RBP16.23■□□□□ 0.19
CCM2-207ENST00000475551 LTBQ06643 244 aa16.23■□□□□ 0.19
CCM2-207ENST00000475551 OR2F1Q13607 317 aa16.23■□□□□ 0.19
CCM2-207ENST00000475551 IRF4Q15306 451 aa16.23■□□□□ 0.19
CCM2-207ENST00000475551 LY6G6FQ5SQ64 297 aa16.23■□□□□ 0.19
CCM2-207ENST00000475551 LY6G5CQ5SRR4 150 aa16.23■□□□□ 0.19
CCM2-207ENST00000475551 SPOUT1Q5T280 376 aaKnown RBP16.23■□□□□ 0.19
CCM2-207ENST00000475551 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.23■□□□□ 0.19
CCM2-207ENST00000475551 LRRC25Q8N386 305 aaPredicted RBP16.23■□□□□ 0.19
CCM2-207ENST00000475551 OR51S1Q8NGJ8 323 aa16.23■□□□□ 0.19
CCM2-207ENST00000475551 EDAQ92838 391 aa16.23■□□□□ 0.19
CCM2-207ENST00000475551 SLC25A28Q96A46 364 aa16.23■□□□□ 0.19
CCM2-207ENST00000475551 ZNF707Q96C28 371 aaPredicted RBP16.23■□□□□ 0.19
CCM2-207ENST00000475551 WDR13Q9H1Z4 485 aa16.23■□□□□ 0.19
CCM2-207ENST00000475551 GAREM1Q9H706 876 aa16.23■□□□□ 0.19
CCM2-207ENST00000475551 DENND4AQ7Z401 1863 aa16.22■□□□□ 0.19
CCM2-207ENST00000475551 GPR31O00270 319 aa16.22■□□□□ 0.19
CCM2-207ENST00000475551 PMS2P2O95744 297 aa16.22■□□□□ 0.19
CCM2-207ENST00000475551 PAK4O96013 591 aaPredicted RBP16.22■□□□□ 0.19
CCM2-207ENST00000475551 MELTFP08582 738 aa16.22■□□□□ 0.19
CCM2-207ENST00000475551 ADRA2CP18825 462 aa16.22■□□□□ 0.19
CCM2-207ENST00000475551 PVALBP20472 110 aaPredicted RBP16.22■□□□□ 0.19
CCM2-207ENST00000475551 CSF2RBP32927 897 aa16.22■□□□□ 0.19
CCM2-207ENST00000475551 RFC3P40938 356 aa16.22■□□□□ 0.19
CCM2-207ENST00000475551 PPIAP62937 165 aaKnown RBP16.22■□□□□ 0.19
CCM2-207ENST00000475551 FGL2Q14314 439 aa16.22■□□□□ 0.19
CCM2-207ENST00000475551 OR2W3Q7Z3T1 314 aa16.22■□□□□ 0.19
CCM2-207ENST00000475551 OR1M1Q8NGA1 313 aa16.22■□□□□ 0.19
CCM2-207ENST00000475551 OTUB2Q96DC9 234 aa16.22■□□□□ 0.19
CCM2-207ENST00000475551 CHST6Q9GZX3 395 aa16.22■□□□□ 0.19
CCM2-207ENST00000475551 TMEM27Q9HBJ8 222 aa16.22■□□□□ 0.19
CCM2-207ENST00000475551 TM7SF3Q9NS93 570 aa16.22■□□□□ 0.19
CCM2-207ENST00000475551 GPN3Q9UHW5 284 aaPredicted RBP16.22■□□□□ 0.19
CCM2-207ENST00000475551 GXYLT2A0PJZ3 443 aa16.22■□□□□ 0.19
CCM2-207ENST00000475551 SYNDIG1LA6NDD5 238 aa16.22■□□□□ 0.19
CCM2-207ENST00000475551 BCL2L11O43521 198 aa16.22■□□□□ 0.19
CCM2-207ENST00000475551 LRG1P02750 347 aa16.22■□□□□ 0.19
CCM2-207ENST00000475551 PRNPP04156 253 aa16.22■□□□□ 0.19
CCM2-207ENST00000475551 SLC35G4P0C7Q5 338 aa16.22■□□□□ 0.19
CCM2-207ENST00000475551 LUMP51884 338 aaPredicted RBP16.22■□□□□ 0.19
CCM2-207ENST00000475551 PAN3Q58A45 887 aaKnown RBP16.22■□□□□ 0.19
CCM2-207ENST00000475551 DHRS7BQ6IAN0 325 aaPredicted RBP16.22■□□□□ 0.19
CCM2-207ENST00000475551 LINC00469Q8N7U9 141 aa16.22■□□□□ 0.19
CCM2-207ENST00000475551 DUSP19Q8WTR2 217 aa16.22■□□□□ 0.19
CCM2-207ENST00000475551 CCDC107Q8WV48 283 aa16.22■□□□□ 0.19
CCM2-207ENST00000475551 RNF166Q96A37 237 aaPredicted RBP16.22■□□□□ 0.19
CCM2-207ENST00000475551 FAM117AQ9C073 453 aa16.22■□□□□ 0.19
CCM2-207ENST00000475551 ZNF768Q9H5H4 540 aaKnown RBP16.22■□□□□ 0.19
CCM2-207ENST00000475551 EXO5Q9H790 373 aa16.22■□□□□ 0.19
CCM2-207ENST00000475551 TMEM185BQ9H7F4 350 aa16.22■□□□□ 0.19
CCM2-207ENST00000475551 MRPS30Q9NP92 439 aaKnown RBP16.22■□□□□ 0.19
CCM2-207ENST00000475551 KCNE5Q9UJ90 142 aa16.22■□□□□ 0.19
CCM2-207ENST00000475551 RANBP2P49792 3224 aaKnown RBP16.22■□□□□ 0.19
CCM2-207ENST00000475551 IDSB3KWA1 339 aa16.21■□□□□ 0.19
CCM2-207ENST00000475551 ITGB2P05107 769 aa16.21■□□□□ 0.19
CCM2-207ENST00000475551 NTHL1P78549 312 aa16.21■□□□□ 0.19
CCM2-207ENST00000475551 Q499Y3 187 aa16.21■□□□□ 0.19
CCM2-207ENST00000475551 SLC35D3Q5M8T2 416 aa16.21■□□□□ 0.19
CCM2-207ENST00000475551 GLT8D1Q68CQ7 371 aa16.21■□□□□ 0.19
CCM2-207ENST00000475551 TMEM88Q6PEY1 159 aa16.21■□□□□ 0.19
CCM2-207ENST00000475551 MAMSTRQ6ZN01 415 aa16.21■□□□□ 0.19
CCM2-207ENST00000475551 LRRTM1Q86UE6 522 aa16.21■□□□□ 0.19
CCM2-207ENST00000475551 BEST3Q8N1M1 668 aa16.21■□□□□ 0.19
CCM2-207ENST00000475551 SLC39A11Q8N1S5 342 aa16.21■□□□□ 0.19
CCM2-207ENST00000475551 C12orf45Q8N5I9 185 aaPredicted RBP16.21■□□□□ 0.19
CCM2-207ENST00000475551 ARRDC3Q96B67 414 aa16.21■□□□□ 0.19
CCM2-207ENST00000475551 FERD3LQ96RJ6 166 aa16.21■□□□□ 0.19
CCM2-207ENST00000475551 ZNF559Q9BR84 538 aa16.21■□□□□ 0.19
CCM2-207ENST00000475551 FKRPQ9H9S5 495 aa16.21■□□□□ 0.19
CCM2-207ENST00000475551 APOBEC3BQ9UH17 382 aaKnown RBP16.21■□□□□ 0.19
CCM2-207ENST00000475551 FBXL21Q9UKT6 434 aa16.21■□□□□ 0.19
CCM2-207ENST00000475551 TNFSF18Q9UNG2 199 aa16.21■□□□□ 0.19
CCM2-207ENST00000475551 A0A0B4J2E0 115 aa16.21■□□□□ 0.18
CCM2-207ENST00000475551 A0A1B0GX12 115 aa16.21■□□□□ 0.18
CCM2-207ENST00000475551 LINC01387J3KSC0 135 aa16.21■□□□□ 0.18
CCM2-207ENST00000475551 SLC25A4P12235 298 aa16.21■□□□□ 0.18
CCM2-207ENST00000475551 GTF2F2P13984 249 aa16.21■□□□□ 0.18
CCM2-207ENST00000475551 RAB28P51157 221 aa16.21■□□□□ 0.18
CCM2-207ENST00000475551 UBE2IP63279 158 aaKnown RBP16.21■□□□□ 0.18
CCM2-207ENST00000475551 DCDP81605 110 aaKnown RBP16.21■□□□□ 0.18
CCM2-207ENST00000475551 SRSF4Q08170 494 aaKnown RBP16.21■□□□□ 0.18
CCM2-207ENST00000475551 SHHQ15465 462 aa16.21■□□□□ 0.18
CCM2-207ENST00000475551 PGAP1Q75T13 922 aa16.21■□□□□ 0.18
CCM2-207ENST00000475551 ASB12Q8WXK4 309 aa16.21■□□□□ 0.18
CCM2-207ENST00000475551 COL26A1Q96A83 441 aa16.21■□□□□ 0.18
CCM2-207ENST00000475551 ZNF426Q9BUY5 554 aa16.21■□□□□ 0.18
CCM2-207ENST00000475551 TSPAN10Q9H1Z9 355 aaPredicted RBP16.21■□□□□ 0.18
CCM2-207ENST00000475551 GGT3PA6NGU5 568 aa16.2■□□□□ 0.18
CCM2-207ENST00000475551 PEX12O00623 359 aa16.2■□□□□ 0.18
CCM2-207ENST00000475551 CSRP1P21291 193 aaKnown RBP16.2■□□□□ 0.18
CCM2-207ENST00000475551 SNTB1Q13884 538 aaKnown RBP16.2■□□□□ 0.18
CCM2-207ENST00000475551 SERTAD2Q14140 314 aa16.2■□□□□ 0.18
CCM2-207ENST00000475551 DCST2Q5T1A1 773 aa16.2■□□□□ 0.18
CCM2-207ENST00000475551 ZNF684Q5T5D7 378 aa16.2■□□□□ 0.18
CCM2-207ENST00000475551 ANKRD16Q6P6B7 361 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms