RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 ZNF432O94892 652 aa6.19□□□□□ -1.42
LIMD1-204ENST00000474665 SYNGR4O95473 234 aa6.19□□□□□ -1.42
LIMD1-204ENST00000474665 IL18BPO95998 194 aa6.19□□□□□ -1.42
LIMD1-204ENST00000474665 MT-ATP6P00846 226 aa6.19□□□□□ -1.42
LIMD1-204ENST00000474665 IL2RAP01589 272 aa6.19□□□□□ -1.42
LIMD1-204ENST00000474665 CRHP06850 196 aa6.19□□□□□ -1.42
LIMD1-204ENST00000474665 YES1P07947 543 aa6.19□□□□□ -1.42
LIMD1-204ENST00000474665 TMIGD3P0DMS9 266 aaPredicted RBP6.19□□□□□ -1.42
LIMD1-204ENST00000474665 FCGR2AP12318 317 aa6.19□□□□□ -1.42
LIMD1-204ENST00000474665 IFI30P13284 250 aa6.19□□□□□ -1.42
LIMD1-204ENST00000474665 ITGA2P17301 1181 aa6.19□□□□□ -1.42
LIMD1-204ENST00000474665 BMP5P22003 454 aa6.19□□□□□ -1.42
LIMD1-204ENST00000474665 DNAJA1P31689 397 aaKnown RBP6.19□□□□□ -1.42
LIMD1-204ENST00000474665 UQCRC1P31930 480 aa6.19□□□□□ -1.42
LIMD1-204ENST00000474665 GPR4P46093 362 aa6.19□□□□□ -1.42
LIMD1-204ENST00000474665 RPS4XP62701 263 aaKnown RBP6.19□□□□□ -1.42
LIMD1-204ENST00000474665 SIRPAP78324 504 aa6.19□□□□□ -1.42
LIMD1-204ENST00000474665 SPIBQ01892 262 aa6.19□□□□□ -1.42
LIMD1-204ENST00000474665 LGALS3BPQ08380 585 aa6.19□□□□□ -1.42
LIMD1-204ENST00000474665 RASGEF1BQ0VAM2 473 aa6.19□□□□□ -1.42
LIMD1-204ENST00000474665 POU4F3Q15319 338 aa6.19□□□□□ -1.42
LIMD1-204ENST00000474665 SF3B4Q15427 424 aaKnown RBP eCLIP6.19□□□□□ -1.422e-6■■■□□ 14.8
LIMD1-204ENST00000474665 HSPB2Q16082 182 aa6.19□□□□□ -1.42
LIMD1-204ENST00000474665 FGD3Q5JSP0 725 aa6.19□□□□□ -1.42
LIMD1-204ENST00000474665 OTUD3Q5T2D3 398 aaPredicted RBP6.19□□□□□ -1.42
LIMD1-204ENST00000474665 HMBOX1Q6NT76 420 aa6.19□□□□□ -1.42
LIMD1-204ENST00000474665 PPP4R4Q6NUP7 873 aa6.19□□□□□ -1.42
LIMD1-204ENST00000474665 TTC33Q6PID6 262 aaPredicted RBP6.19□□□□□ -1.42
LIMD1-204ENST00000474665 ZNF474Q6S9Z5 364 aaPredicted RBP6.19□□□□□ -1.42
LIMD1-204ENST00000474665 C5orf46Q6UWT4 87 aa6.19□□□□□ -1.42
LIMD1-204ENST00000474665 ZNF730Q6ZMV8 503 aa6.19□□□□□ -1.42
LIMD1-204ENST00000474665 TMPRSS11FQ6ZWK6 438 aa6.19□□□□□ -1.42
LIMD1-204ENST00000474665 FAM214BQ7L5A3 538 aa6.19□□□□□ -1.42
LIMD1-204ENST00000474665 CHMP1BQ7LBR1 199 aa6.19□□□□□ -1.42
LIMD1-204ENST00000474665 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.19□□□□□ -1.42
LIMD1-204ENST00000474665 BIVMQ86UB2 503 aa6.19□□□□□ -1.42
LIMD1-204ENST00000474665 CYP4Z1Q86W10 505 aa6.19□□□□□ -1.42
LIMD1-204ENST00000474665 RNF113BQ8IZP6 322 aaKnown RBP6.19□□□□□ -1.42
LIMD1-204ENST00000474665 ZNF808Q8N4W9 903 aaPredicted RBP6.19□□□□□ -1.42
LIMD1-204ENST00000474665 SCAIQ8N9R8 606 aa6.19□□□□□ -1.42
LIMD1-204ENST00000474665 LRRC75AQ8NAA5 344 aa6.19□□□□□ -1.42
LIMD1-204ENST00000474665 ACBD4Q8NC06 268 aa6.19□□□□□ -1.42
LIMD1-204ENST00000474665 ADPRHL1Q8NDY3 354 aa6.19□□□□□ -1.42
LIMD1-204ENST00000474665 OR9K2Q8NGE7 335 aa6.19□□□□□ -1.42
LIMD1-204ENST00000474665 OR13C2Q8NGS9 318 aa6.19□□□□□ -1.42
LIMD1-204ENST00000474665 MOSPD2Q8NHP6 518 aa6.19□□□□□ -1.42
LIMD1-204ENST00000474665 BPIFA2Q96DR5 249 aa6.19□□□□□ -1.42
LIMD1-204ENST00000474665 SGTBQ96EQ0 304 aa6.19□□□□□ -1.42
LIMD1-204ENST00000474665 GMPPAQ96IJ6 420 aaPredicted RBP6.19□□□□□ -1.42
LIMD1-204ENST00000474665 FAM46AQ96IP4 442 aaKnown RBP6.19□□□□□ -1.42
LIMD1-204ENST00000474665 TXNDC15Q96J42 360 aa6.19□□□□□ -1.42
LIMD1-204ENST00000474665 ZFP3Q96NJ6 502 aa6.19□□□□□ -1.42
LIMD1-204ENST00000474665 ALPK1Q96QP1 1244 aa6.19□□□□□ -1.42
LIMD1-204ENST00000474665 TNFRSF13CQ96RJ3 184 aa6.19□□□□□ -1.42
LIMD1-204ENST00000474665 ZNF347Q96SE7 839 aa6.19□□□□□ -1.42
LIMD1-204ENST00000474665 EPYCQ99645 322 aa6.19□□□□□ -1.42
LIMD1-204ENST00000474665 FOXC2Q99958 501 aa6.19□□□□□ -1.42
LIMD1-204ENST00000474665 TRIM15Q9C019 465 aa6.19□□□□□ -1.42
LIMD1-204ENST00000474665 OPN3Q9H1Y3 402 aaPredicted RBP6.19□□□□□ -1.42
LIMD1-204ENST00000474665 FKRPQ9H9S5 495 aa6.19□□□□□ -1.42
LIMD1-204ENST00000474665 FANCFQ9NPI8 374 aa6.19□□□□□ -1.42
LIMD1-204ENST00000474665 NPDC1Q9NQX5 325 aaPredicted RBP6.19□□□□□ -1.42
LIMD1-204ENST00000474665 ARMC1Q9NVT9 282 aa6.19□□□□□ -1.42
LIMD1-204ENST00000474665 ZNF629Q9UEG4 869 aaPredicted RBP6.19□□□□□ -1.42
LIMD1-204ENST00000474665 ZNF229Q9UJW7 825 aa6.19□□□□□ -1.42
LIMD1-204ENST00000474665 B3GALT5Q9Y2C3 310 aa6.19□□□□□ -1.42
LIMD1-204ENST00000474665 MED31Q9Y3C7 131 aa6.19□□□□□ -1.42
LIMD1-204ENST00000474665 FAM32AQ9Y421 112 aaKnown RBP6.19□□□□□ -1.42
LIMD1-204ENST00000474665 CORINQ9Y5Q5 1042 aa6.19□□□□□ -1.42
LIMD1-204ENST00000474665 FLVCR1Q9Y5Y0 555 aa6.19□□□□□ -1.42
LIMD1-204ENST00000474665 U3KQV3 271 aa6.19□□□□□ -1.42
LIMD1-204ENST00000474665 ARID1AO14497 2285 aa6.18□□□□□ -1.42
LIMD1-204ENST00000474665 TRAV27A0A087WT01 109 aa6.18□□□□□ -1.42
LIMD1-204ENST00000474665 ERICH4A6NGS2 130 aa6.18□□□□□ -1.42
LIMD1-204ENST00000474665 A8MXE2 369 aa6.18□□□□□ -1.42
LIMD1-204ENST00000474665 TNFRSF11BO00300 401 aa6.18□□□□□ -1.42
LIMD1-204ENST00000474665 CIB2O75838 187 aa6.18□□□□□ -1.42
LIMD1-204ENST00000474665 KRT36O76013 467 aa6.18□□□□□ -1.42
LIMD1-204ENST00000474665 GADD45GO95257 159 aa6.18□□□□□ -1.42
LIMD1-204ENST00000474665 TP53P04637 393 aaPredicted RBP6.18□□□□□ -1.42
LIMD1-204ENST00000474665 AGAP20933 346 aa6.18□□□□□ -1.42
LIMD1-204ENST00000474665 PCSK6P29122 969 aa6.18□□□□□ -1.42
LIMD1-204ENST00000474665 CHRNB4P30926 498 aa6.18□□□□□ -1.42
LIMD1-204ENST00000474665 OPRM1P35372 400 aa6.18□□□□□ -1.42
LIMD1-204ENST00000474665 AQP2P41181 271 aa6.18□□□□□ -1.42
LIMD1-204ENST00000474665 GSSP48637 474 aa6.18□□□□□ -1.42
LIMD1-204ENST00000474665 FOXG1P55316 489 aaPredicted RBP6.18□□□□□ -1.42
LIMD1-204ENST00000474665 RPL18Q07020 188 aaKnown RBP6.18□□□□□ -1.42
LIMD1-204ENST00000474665 PUDPQ08623 228 aa6.18□□□□□ -1.42
LIMD1-204ENST00000474665 ZP4Q12836 540 aa6.18□□□□□ -1.42
LIMD1-204ENST00000474665 PMS2P3Q13401 168 aa6.18□□□□□ -1.42
LIMD1-204ENST00000474665 RNPS1Q15287 305 aaKnown RBP6.18□□□□□ -1.42
LIMD1-204ENST00000474665 FBXL19-AS1Q494R0 122 aa6.18□□□□□ -1.42
LIMD1-204ENST00000474665 OR2A2Q6IF42 318 aa6.18□□□□□ -1.42
LIMD1-204ENST00000474665 PGBD2Q6P3X8 592 aa6.18□□□□□ -1.42
LIMD1-204ENST00000474665 MTFR2Q6P444 385 aa6.18□□□□□ -1.42
LIMD1-204ENST00000474665 XKRXQ6PP77 449 aa6.18□□□□□ -1.42
LIMD1-204ENST00000474665 CLEC9AQ6UXN8 241 aa6.18□□□□□ -1.42
LIMD1-204ENST00000474665 TFAP2EQ6VUC0 442 aa6.18□□□□□ -1.42
LIMD1-204ENST00000474665 THSD4Q6ZMP0 1018 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms