RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 HMCESQ96FZ2 354 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 ABHD1Q96SE0 405 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 DIRC2Q96SL1 478 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 PCYT2Q99447 389 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 ACTR3CQ9C0K3 210 aaPredicted RBP4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 LAT2Q9GZY6 243 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 SYT4Q9H2B2 425 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 IKZF5Q9H5V7 419 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 LMAN1LQ9HAT1 526 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 GCM1Q9NP62 436 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 RPS10P5Q9NQ39 176 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 UBQLN4Q9NRR5 601 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 GPR173Q9NS66 373 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 KCND3Q9UK17 655 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 FLVCR1Q9Y5Y0 555 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 YLPM1P49750 1951 aaKnown RBP4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 IGLV3-22A0A075B6J6 115 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 TMEM269A0A1B0GVZ9 245 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 hCG_1809904A0A1W2PP81 198 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 A0A1W2PPH5 198 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 A0A1W2PR64 198 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 A0A1W2PRV1 198 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 SMIM30A4D0T7 59 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 GGT3PA6NGU5 568 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 A6NIZ1 184 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 ZNF724A8MTY0 619 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 TNFRSF11BO00300 401 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 PHOX2AO14813 284 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 PGRMC2O15173 223 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 PRAMEF4O60810 478 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 MLYCDO95822 493 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 DRD5P21918 477 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 ACHEP22303 614 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 IL2RGP31785 369 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 LUMP51884 338 aaPredicted RBP4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 PGGT1BP53609 377 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 NDUFA6P56556 154 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 REEP5Q00765 189 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 FABP5Q01469 135 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 TSPAN31Q12999 210 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 RHEBQ15382 184 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 NKAIN1Q4KMZ8 207 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 KHDC3LQ587J8 217 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 LRIF1Q5T3J3 769 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 ARMC12Q5T9G4 340 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 KCTD11Q693B1 232 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 JMJD6Q6NYC1 403 aaPredicted RBP4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 LINGO4Q6UY18 593 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 C5orf24Q7Z6I8 188 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 SERPINA11Q86U17 422 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 ZNF567Q8N184 647 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 SLC5A8Q8N695 610 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 EID2Q8N6I1 236 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 OR7G2Q8NG99 324 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 OR4A4PQ8NGN8 299 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 OR9A4Q8NGU2 314 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 OR4C6Q8NH72 309 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 DUSP19Q8WTR2 217 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 SLC35F5Q8WV83 523 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 TAAR8Q969N4 342 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 ZBTB8AQ96BR9 441 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 GALNT14Q96FL9 552 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 ADGRG7Q96K78 797 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 CNN2Q99439 309 aaKnown RBP4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 MRPL45Q9BRJ2 306 aaKnown RBP4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 URM1Q9BTM9 101 aaKnown RBP4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 SGPP1Q9BX95 441 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 COMMD4Q9H0A8 199 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 BEX1Q9HBH7 125 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 TMEM27Q9HBJ8 222 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 TDP1Q9NUW8 608 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 ASB6Q9NWX5 421 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 NKIRAS2Q9NYR9 191 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 SLC25A37Q9NYZ2 338 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 PRODH2Q9UF12 536 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 A0A0G2JMZ2 1700 aa4.69□□□□□ -1.66
TMEM39A-206ENST00000473684 A0A087WZ62 844 aa4.69□□□□□ -1.66
TMEM39A-206ENST00000473684 SLC5A10A0PJK1 596 aa4.69□□□□□ -1.66
TMEM39A-206ENST00000473684 IDSB3KWA1 339 aa4.69□□□□□ -1.66
TMEM39A-206ENST00000473684 GPR89AB7ZAQ6 455 aa4.69□□□□□ -1.66
TMEM39A-206ENST00000473684 F5H423 210 aaPredicted RBP4.69□□□□□ -1.66
TMEM39A-206ENST00000473684 CYR61O00622 381 aa4.69□□□□□ -1.66
TMEM39A-206ENST00000473684 B4GALT5O43286 388 aa4.69□□□□□ -1.66
TMEM39A-206ENST00000473684 RNF13O43567 381 aa4.69□□□□□ -1.66
TMEM39A-206ENST00000473684 TCF21O43680 179 aa4.69□□□□□ -1.66
TMEM39A-206ENST00000473684 GPRIN2O60269 458 aa4.69□□□□□ -1.66
TMEM39A-206ENST00000473684 OR1I1O60431 355 aa4.69□□□□□ -1.66
TMEM39A-206ENST00000473684 GLCEO94923 617 aa4.69□□□□□ -1.66
TMEM39A-206ENST00000473684 SCAF4O95104 1147 aaKnown RBP4.69□□□□□ -1.66
TMEM39A-206ENST00000473684 PNPP00491 289 aa4.69□□□□□ -1.66
TMEM39A-206ENST00000473684 MT-ND4P03905 459 aa4.69□□□□□ -1.66
TMEM39A-206ENST00000473684 ICAM1P05362 532 aa4.69□□□□□ -1.66
TMEM39A-206ENST00000473684 EIF4EP06730 217 aaKnown RBP4.69□□□□□ -1.66
TMEM39A-206ENST00000473684 SFTA3P0C7M3 94 aa4.69□□□□□ -1.66
TMEM39A-206ENST00000473684 GPR89BP0CG08 455 aa4.69□□□□□ -1.66
TMEM39A-206ENST00000473684 TMIGD3P0DMS9 266 aaPredicted RBP4.69□□□□□ -1.66
TMEM39A-206ENST00000473684 TBPP20226 339 aa4.69□□□□□ -1.66
TMEM39A-206ENST00000473684 CD82P27701 267 aa4.69□□□□□ -1.66
TMEM39A-206ENST00000473684 MAPK9P45984 424 aa4.69□□□□□ -1.66
TMEM39A-206ENST00000473684 CAV2P51636 162 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms