RNA–Protein interactions for RNA: ENST00000473373.1

CPNE1-222, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-222ENST00000473373 OR6N1Q8NGY5 312 aa10.13□□□□□ -0.79
CPNE1-222ENST00000473373 SMAP2Q8WU79 429 aaPredicted RBP10.13□□□□□ -0.79
CPNE1-222ENST00000473373 NEUROG1Q92886 237 aa10.13□□□□□ -0.79
CPNE1-222ENST00000473373 TAMM41Q96BW9 452 aa10.13□□□□□ -0.79
CPNE1-222ENST00000473373 Q96MF0 132 aa10.13□□□□□ -0.79
CPNE1-222ENST00000473373 TMEM43Q9BTV4 400 aa10.13□□□□□ -0.79
CPNE1-222ENST00000473373 PTDSS2Q9BVG9 487 aa10.13□□□□□ -0.79
CPNE1-222ENST00000473373 FKRPQ9H9S5 495 aa10.13□□□□□ -0.79
CPNE1-222ENST00000473373 SLC17A5Q9NRA2 495 aa10.13□□□□□ -0.79
CPNE1-222ENST00000473373 AP3M1Q9Y2T2 418 aa10.13□□□□□ -0.79
CPNE1-222ENST00000473373 NAV3Q8IVL0 2385 aa10.12□□□□□ -0.79
CPNE1-222ENST00000473373 A0A096LPE4 126 aa10.12□□□□□ -0.79
CPNE1-222ENST00000473373 A0A1W2PPZ6 126 aa10.12□□□□□ -0.79
CPNE1-222ENST00000473373 ELOVL7A1L3X0 281 aa10.12□□□□□ -0.79
CPNE1-222ENST00000473373 DPRXA6NFQ7 191 aa10.12□□□□□ -0.79
CPNE1-222ENST00000473373 FTCDNL1E5RQL4 147 aa10.12□□□□□ -0.79
CPNE1-222ENST00000473373 M0R3G1 203 aa10.12□□□□□ -0.79
CPNE1-222ENST00000473373 SMAD7O15105 426 aaKnown RBP10.12□□□□□ -0.79
CPNE1-222ENST00000473373 RNF13O43567 381 aa10.12□□□□□ -0.79
CPNE1-222ENST00000473373 FMO6PO60774 539 aa10.12□□□□□ -0.79
CPNE1-222ENST00000473373 SHOX2O60902 331 aaPredicted RBP10.12□□□□□ -0.79
CPNE1-222ENST00000473373 GMNNO75496 209 aa10.12□□□□□ -0.79
CPNE1-222ENST00000473373 CH25HO95992 272 aa10.12□□□□□ -0.79
CPNE1-222ENST00000473373 MT-ATP6P00846 226 aa10.12□□□□□ -0.79
CPNE1-222ENST00000473373 LGALS3BPQ08380 585 aa10.12□□□□□ -0.79
CPNE1-222ENST00000473373 PUDPQ08623 228 aa10.12□□□□□ -0.79
CPNE1-222ENST00000473373 VEZF1Q14119 521 aa10.12□□□□□ -0.79
CPNE1-222ENST00000473373 HIKESHIQ53FT3 197 aa10.12□□□□□ -0.79
CPNE1-222ENST00000473373 AGAP6Q5VW22 663 aa10.12□□□□□ -0.79
CPNE1-222ENST00000473373 RBM45Q8IUH3 476 aaKnown RBP10.12□□□□□ -0.79
CPNE1-222ENST00000473373 MICU2Q8IYU8 434 aa10.12□□□□□ -0.79
CPNE1-222ENST00000473373 GPR32P1Q8NGA4 272 aa10.12□□□□□ -0.79
CPNE1-222ENST00000473373 SLC41A3Q96GZ6 507 aa10.12□□□□□ -0.79
CPNE1-222ENST00000473373 HS6ST2Q96MM7 605 aa10.12□□□□□ -0.79
CPNE1-222ENST00000473373 MUS81Q96NY9 551 aa10.12□□□□□ -0.79
CPNE1-222ENST00000473373 EFCAB1Q9HAE3 211 aa10.12□□□□□ -0.79
CPNE1-222ENST00000473373 NANSQ9NR45 359 aa10.12□□□□□ -0.79
CPNE1-222ENST00000473373 NPAP1Q9NZP6 1156 aa10.12□□□□□ -0.79
CPNE1-222ENST00000473373 RCE1Q9Y256 329 aa10.12□□□□□ -0.79
CPNE1-222ENST00000473373 NOX1Q9Y5S8 564 aa10.12□□□□□ -0.79
CPNE1-222ENST00000473373 SLC25A15Q9Y619 301 aa10.12□□□□□ -0.79
CPNE1-222ENST00000473373 IGKV1D-42A0A075B6H8 117 aa10.11□□□□□ -0.79
CPNE1-222ENST00000473373 MCIDASD6RGH6 385 aa10.11□□□□□ -0.79
CPNE1-222ENST00000473373 LRRN3E7EW58 273 aa10.11□□□□□ -0.79
CPNE1-222ENST00000473373 UPK3AO75631 287 aa10.11□□□□□ -0.79
CPNE1-222ENST00000473373 ZNF682O95780 498 aa10.11□□□□□ -0.79
CPNE1-222ENST00000473373 BGLAPP02818 100 aa10.11□□□□□ -0.79
CPNE1-222ENST00000473373 TNFRSF1BP20333 461 aa10.11□□□□□ -0.79
CPNE1-222ENST00000473373 CD40P25942 277 aa10.11□□□□□ -0.79
CPNE1-222ENST00000473373 CDKN1AP38936 164 aa10.11□□□□□ -0.79
CPNE1-222ENST00000473373 OR1E2P47887 323 aa10.11□□□□□ -0.79
CPNE1-222ENST00000473373 FABP6P51161 128 aa10.11□□□□□ -0.79
CPNE1-222ENST00000473373 SEC24CP53992 1094 aa10.11□□□□□ -0.79
CPNE1-222ENST00000473373 SH3BGRP55822 239 aaPredicted RBP10.11□□□□□ -0.79
CPNE1-222ENST00000473373 GNGT1P63211 74 aa10.11□□□□□ -0.79
CPNE1-222ENST00000473373 TBRG1Q3YBR2 411 aa10.11□□□□□ -0.79
CPNE1-222ENST00000473373 CYBRD1Q53TN4 286 aa10.11□□□□□ -0.79
CPNE1-222ENST00000473373 FKBP9P1Q75LS8 142 aa10.11□□□□□ -0.79
CPNE1-222ENST00000473373 CCDC80Q76M96 950 aa10.11□□□□□ -0.79
CPNE1-222ENST00000473373 NANOGNBQ7Z5D8 188 aa10.11□□□□□ -0.79
CPNE1-222ENST00000473373 EPHX4Q8IUS5 362 aa10.11□□□□□ -0.79
CPNE1-222ENST00000473373 ZIC4Q8N9L1 334 aa10.11□□□□□ -0.79
CPNE1-222ENST00000473373 SCAIQ8N9R8 606 aa10.11□□□□□ -0.79
CPNE1-222ENST00000473373 OR1K1Q8NGR3 316 aa10.11□□□□□ -0.79
CPNE1-222ENST00000473373 OR5J2Q8NH18 312 aa10.11□□□□□ -0.79
CPNE1-222ENST00000473373 FAM162AQ96A26 154 aa10.11□□□□□ -0.79
CPNE1-222ENST00000473373 CMTM5Q96DZ9 223 aa10.11□□□□□ -0.79
CPNE1-222ENST00000473373 MPP4Q96JB8 637 aa10.11□□□□□ -0.79
CPNE1-222ENST00000473373 MOGAT1Q96PD6 335 aa10.11□□□□□ -0.79
CPNE1-222ENST00000473373 ZNF317Q96PQ6 595 aaPredicted RBP10.11□□□□□ -0.79
CPNE1-222ENST00000473373 SMR3AQ99954 134 aa10.11□□□□□ -0.79
CPNE1-222ENST00000473373 WFDC6Q9BQY6 131 aa10.11□□□□□ -0.79
CPNE1-222ENST00000473373 TMEM204Q9BSN7 226 aa10.11□□□□□ -0.79
CPNE1-222ENST00000473373 BDH2Q9BUT1 245 aa10.11□□□□□ -0.79
CPNE1-222ENST00000473373 EMC6Q9BV81 110 aa10.11□□□□□ -0.79
CPNE1-222ENST00000473373 DLL4Q9NR61 685 aa10.11□□□□□ -0.79
CPNE1-222ENST00000473373 USP22Q9UPT9 525 aa10.11□□□□□ -0.79
CPNE1-222ENST00000473373 POFUT2Q9Y2G5 429 aa10.11□□□□□ -0.79
CPNE1-222ENST00000473373 PLCE1Q9P212 2302 aa10.1□□□□□ -0.79
CPNE1-222ENST00000473373 BLOC1S5-TXNDC5H3BN57 136 aa10.1□□□□□ -0.79
CPNE1-222ENST00000473373 FXYD1O00168 92 aa10.1□□□□□ -0.79
CPNE1-222ENST00000473373 NDUFAB1O14561 156 aa10.1□□□□□ -0.79
CPNE1-222ENST00000473373 TMCC2O75069 709 aa10.1□□□□□ -0.79
CPNE1-222ENST00000473373 SEC14L2O76054 403 aa10.1□□□□□ -0.79
CPNE1-222ENST00000473373 BMP4P12644 408 aa10.1□□□□□ -0.79
CPNE1-222ENST00000473373 P2RY4P51582 365 aa10.1□□□□□ -0.79
CPNE1-222ENST00000473373 SLC7A2P52569 658 aa10.1□□□□□ -0.79
CPNE1-222ENST00000473373 TUBA1BP68363 451 aa10.1□□□□□ -0.79
CPNE1-222ENST00000473373 TUBA4AP68366 448 aa10.1□□□□□ -0.79
CPNE1-222ENST00000473373 MXRA7P84157 204 aa10.1□□□□□ -0.79
CPNE1-222ENST00000473373 LIPEQ05469 1076 aa10.1□□□□□ -0.79
CPNE1-222ENST00000473373 LTBQ06643 244 aa10.1□□□□□ -0.79
CPNE1-222ENST00000473373 SPOCK1Q08629 439 aa10.1□□□□□ -0.79
CPNE1-222ENST00000473373 NPRL3Q12980 569 aa10.1□□□□□ -0.79
CPNE1-222ENST00000473373 CAMK2DQ13557 499 aa10.1□□□□□ -0.79
CPNE1-222ENST00000473373 NPTX1Q15818 432 aa10.1□□□□□ -0.79
CPNE1-222ENST00000473373 CEACAM16Q2WEN9 425 aa10.1□□□□□ -0.79
CPNE1-222ENST00000473373 ANKRD16Q6P6B7 361 aa10.1□□□□□ -0.79
CPNE1-222ENST00000473373 TUBA1AQ71U36 451 aa10.1□□□□□ -0.79
CPNE1-222ENST00000473373 CALHM3Q86XJ0 350 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms