RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-223ENST00000473345 FZD7O75084 574 aa8.25□□□□□ -1.09
MCF2L-223ENST00000473345 SNUPNO95149 360 aaKnown RBP8.25□□□□□ -1.09
MCF2L-223ENST00000473345 HPRP00739 348 aa8.25□□□□□ -1.09
MCF2L-223ENST00000473345 HLA-HP01893 362 aa8.25□□□□□ -1.09
MCF2L-223ENST00000473345 VIMP08670 466 aaKnown RBP8.25□□□□□ -1.09
MCF2L-223ENST00000473345 GAAP10253 952 aa8.25□□□□□ -1.09
MCF2L-223ENST00000473345 PNMTP11086 282 aa8.25□□□□□ -1.09
MCF2L-223ENST00000473345 ADRA2CP18825 462 aa8.25□□□□□ -1.09
MCF2L-223ENST00000473345 CLDN17P56750 224 aa8.25□□□□□ -1.09
MCF2L-223ENST00000473345 UBE2NP61088 152 aaKnown RBP8.25□□□□□ -1.09
MCF2L-223ENST00000473345 ACTG1P63261 375 aa8.25□□□□□ -1.09
MCF2L-223ENST00000473345 NPRL3Q12980 569 aa8.25□□□□□ -1.09
MCF2L-223ENST00000473345 SNTB2Q13425 540 aaKnown RBP8.25□□□□□ -1.09
MCF2L-223ENST00000473345 PDCD2Q16342 344 aaPredicted RBP8.25□□□□□ -1.09
MCF2L-223ENST00000473345 CEACAM16Q2WEN9 425 aa8.25□□□□□ -1.09
MCF2L-223ENST00000473345 RPS26P11Q5JNZ5 115 aaPredicted RBP8.25□□□□□ -1.09
MCF2L-223ENST00000473345 TMEM255AQ5JRV8 349 aa8.25□□□□□ -1.09
MCF2L-223ENST00000473345 TMEM123Q8N131 208 aa8.25□□□□□ -1.09
MCF2L-223ENST00000473345 FAM169BQ8N8A8 192 aa8.25□□□□□ -1.09
MCF2L-223ENST00000473345 ZNF540Q8NDQ6 660 aa8.25□□□□□ -1.09
MCF2L-223ENST00000473345 BHLHE22Q8NFJ8 381 aaPredicted RBP8.25□□□□□ -1.09
MCF2L-223ENST00000473345 OR4F15Q8NGB8 312 aa8.25□□□□□ -1.09
MCF2L-223ENST00000473345 PNPT1Q8TCS8 783 aaKnown RBP8.25□□□□□ -1.09
MCF2L-223ENST00000473345 FAM216AQ8WUB2 273 aa8.25□□□□□ -1.09
MCF2L-223ENST00000473345 ZFAND2BQ8WV99 257 aa8.25□□□□□ -1.09
MCF2L-223ENST00000473345 MRPL24Q96A35 216 aaKnown RBP8.25□□□□□ -1.09
MCF2L-223ENST00000473345 KTI12Q96EK9 354 aaPredicted RBP8.25□□□□□ -1.09
MCF2L-223ENST00000473345 LRRC37BQ96QE4 947 aa8.25□□□□□ -1.09
MCF2L-223ENST00000473345 TSPAN32Q96QS1 320 aa8.25□□□□□ -1.09
MCF2L-223ENST00000473345 SORT1Q99523 831 aa8.25□□□□□ -1.09
MCF2L-223ENST00000473345 SYT3Q9BQG1 590 aa8.25□□□□□ -1.09
MCF2L-223ENST00000473345 TMPRSS13Q9BYE2 586 aa8.25□□□□□ -1.09
MCF2L-223ENST00000473345 LINC00470Q9BZP3 86 aa8.25□□□□□ -1.09
MCF2L-223ENST00000473345 GPR35Q9HC97 309 aa8.25□□□□□ -1.09
MCF2L-223ENST00000473345 ZNF275Q9NSD4 429 aaPredicted RBP8.25□□□□□ -1.09
MCF2L-223ENST00000473345 FGFR1OP2Q9NVK5 253 aa8.25□□□□□ -1.09
MCF2L-223ENST00000473345 MARCOQ9UEW3 520 aaPredicted RBP8.25□□□□□ -1.09
MCF2L-223ENST00000473345 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.25□□□□□ -1.09
MCF2L-223ENST00000473345 PCDHGB1Q9Y5G3 927 aa8.25□□□□□ -1.09
MCF2L-223ENST00000473345 DSPPQ9NZW4 1301 aa8.25□□□□□ -1.09
MCF2L-223ENST00000473345 PKD1L1Q8TDX9 2849 aa8.25□□□□□ -1.09
MCF2L-223ENST00000473345 IGKV1D-42A0A075B6H8 117 aa8.24□□□□□ -1.09
MCF2L-223ENST00000473345 A0A0A6YYJ9 748 aa8.24□□□□□ -1.09
MCF2L-223ENST00000473345 PRSS51A0A1B0GVH4 220 aa8.24□□□□□ -1.09
MCF2L-223ENST00000473345 CDHR4A6H8M9 788 aa8.24□□□□□ -1.09
MCF2L-223ENST00000473345 B4DSR2 109 aa8.24□□□□□ -1.09
MCF2L-223ENST00000473345 SLCO1B7G3V0H7 640 aa8.24□□□□□ -1.09
MCF2L-223ENST00000473345 TRAF3IP2O43734 574 aaPredicted RBP8.24□□□□□ -1.09
MCF2L-223ENST00000473345 SNX3O60493 162 aa8.24□□□□□ -1.09
MCF2L-223ENST00000473345 DEAF1O75398 565 aaPredicted RBP8.24□□□□□ -1.09
MCF2L-223ENST00000473345 GSNP06396 782 aa8.24□□□□□ -1.09
MCF2L-223ENST00000473345 GPIP06744 558 aa8.24□□□□□ -1.09
MCF2L-223ENST00000473345 MSMBP08118 114 aa8.24□□□□□ -1.09
MCF2L-223ENST00000473345 ALDOCP09972 364 aaKnown RBP8.24□□□□□ -1.09
MCF2L-223ENST00000473345 ZNF35P13682 527 aa8.24□□□□□ -1.09
MCF2L-223ENST00000473345 HLA-DOBP13765 273 aa8.24□□□□□ -1.09
MCF2L-223ENST00000473345 ZNF14P17017 642 aaPredicted RBP8.24□□□□□ -1.09
MCF2L-223ENST00000473345 EPHA1P21709 976 aa8.24□□□□□ -1.09
MCF2L-223ENST00000473345 NR4A1P22736 598 aa8.24□□□□□ -1.09
MCF2L-223ENST00000473345 MAGEB1P43366 347 aa8.24□□□□□ -1.09
MCF2L-223ENST00000473345 HTR3AP46098 478 aa8.24□□□□□ -1.09
MCF2L-223ENST00000473345 SLC1A6P48664 564 aa8.24□□□□□ -1.09
MCF2L-223ENST00000473345 KHKP50053 298 aa8.24□□□□□ -1.09
MCF2L-223ENST00000473345 AQP5P55064 265 aa8.24□□□□□ -1.09
MCF2L-223ENST00000473345 NME5P56597 212 aa8.24□□□□□ -1.09
MCF2L-223ENST00000473345 ABCE1P61221 599 aaKnown RBP8.24□□□□□ -1.09
MCF2L-223ENST00000473345 DAG1Q14118 895 aa8.24□□□□□ -1.09
MCF2L-223ENST00000473345 FXNQ16595 210 aa8.24□□□□□ -1.09
MCF2L-223ENST00000473345 TUSC1Q2TAM9 212 aa8.24□□□□□ -1.09
MCF2L-223ENST00000473345 GTDC1Q4AE62 458 aa8.24□□□□□ -1.09
MCF2L-223ENST00000473345 PRR31Q5SQ13 230 aa8.24□□□□□ -1.09
MCF2L-223ENST00000473345 ATAD3BQ5T9A4 648 aa8.24□□□□□ -1.09
MCF2L-223ENST00000473345 C1orf140Q5VVS0 124 aa8.24□□□□□ -1.09
MCF2L-223ENST00000473345 LRRC74BQ6ZQY2 392 aa8.24□□□□□ -1.09
MCF2L-223ENST00000473345 CPLX4Q7Z7G2 160 aa8.24□□□□□ -1.09
MCF2L-223ENST00000473345 SERPINA11Q86U17 422 aa8.24□□□□□ -1.09
MCF2L-223ENST00000473345 GLCCI1Q86VQ1 547 aa8.24□□□□□ -1.09
MCF2L-223ENST00000473345 ZNF584Q8IVC4 421 aa8.24□□□□□ -1.09
MCF2L-223ENST00000473345 CADM2Q8N3J6 435 aa8.24□□□□□ -1.09
MCF2L-223ENST00000473345 C3orf56Q8N813 242 aa8.24□□□□□ -1.09
MCF2L-223ENST00000473345 ZNF781Q8N8C0 355 aa8.24□□□□□ -1.09
MCF2L-223ENST00000473345 BCAS4Q8TDM0 211 aa8.24□□□□□ -1.09
MCF2L-223ENST00000473345 PMM1Q92871 262 aa8.24□□□□□ -1.09
MCF2L-223ENST00000473345 C1orf147Q96MC9 270 aaPredicted RBP8.24□□□□□ -1.09
MCF2L-223ENST00000473345 TRNT1Q96Q11 434 aaKnown RBP8.24□□□□□ -1.09
MCF2L-223ENST00000473345 PRPF18Q99633 342 aaKnown RBP8.24□□□□□ -1.09
MCF2L-223ENST00000473345 SLC6A7Q99884 636 aa8.24□□□□□ -1.09
MCF2L-223ENST00000473345 DYNLRB1Q9NP97 96 aa8.24□□□□□ -1.09
MCF2L-223ENST00000473345 OPN4Q9UHM6 478 aa8.24□□□□□ -1.09
MCF2L-223ENST00000473345 PRDM4Q9UKN5 801 aa8.24□□□□□ -1.09
MCF2L-223ENST00000473345 CACNG2Q9Y698 323 aa8.24□□□□□ -1.09
MCF2L-223ENST00000473345 KRT33AO76009 404 aa8.23□□□□□ -1.09
MCF2L-223ENST00000473345 FSHBP01225 129 aa8.23□□□□□ -1.09
MCF2L-223ENST00000473345 PATE4P0C8F1 98 aa8.23□□□□□ -1.09
MCF2L-223ENST00000473345 ARAFP10398 606 aa8.23□□□□□ -1.09
MCF2L-223ENST00000473345 SAGP10523 405 aaPredicted RBP8.23□□□□□ -1.09
MCF2L-223ENST00000473345 NAT2P11245 290 aa8.23□□□□□ -1.09
MCF2L-223ENST00000473345 FKBP2P26885 142 aaKnown RBP8.23□□□□□ -1.09
MCF2L-223ENST00000473345 RPS5P46782 204 aaKnown RBP8.23□□□□□ -1.09
MCF2L-223ENST00000473345 ERVS71-1P61550 626 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms