RNA–Protein interactions for RNA: ENST00000472959.5

TOP3A-204, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-204ENST00000472959 HDHD5Q9BXW7 423 aa18.4■□□□□ 0.54
TOP3A-204ENST00000472959 TMEM5Q9Y2B1 443 aa18.4■□□□□ 0.54
TOP3A-204ENST00000472959 HECTD1Q9ULT8 2610 aa18.4■□□□□ 0.54
TOP3A-204ENST00000472959 MPDZO75970 2070 aa18.4■□□□□ 0.54
TOP3A-204ENST00000472959 TRBV4-1A0A0J9YWV2 114 aa18.39■□□□□ 0.53
TOP3A-204ENST00000472959 OR6C65A6NJZ3 312 aa18.39■□□□□ 0.53
TOP3A-204ENST00000472959 AKAP8O43823 692 aaKnown RBP18.39■□□□□ 0.53
TOP3A-204ENST00000472959 AHCYP23526 432 aa18.39■□□□□ 0.53
TOP3A-204ENST00000472959 UGT2B10P36537 528 aa18.39■□□□□ 0.53
TOP3A-204ENST00000472959 LSM11P83369 360 aaKnown RBP eCLIP18.39■□□□□ 0.53
TOP3A-204ENST00000472959 ANKDD1AQ495B1 522 aa18.39■□□□□ 0.53
TOP3A-204ENST00000472959 TBPL2Q6SJ96 375 aa18.39■□□□□ 0.53
TOP3A-204ENST00000472959 TMPRSS11FQ6ZWK6 438 aa18.39■□□□□ 0.53
TOP3A-204ENST00000472959 ANKK1Q8NFD2 765 aa18.39■□□□□ 0.53
TOP3A-204ENST00000472959 OR52J3Q8NH60 311 aa18.39■□□□□ 0.53
TOP3A-204ENST00000472959 FUZQ9BT04 418 aa18.39■□□□□ 0.53
TOP3A-204ENST00000472959 KRCC1Q9NPI7 259 aaPredicted RBP18.39■□□□□ 0.53
TOP3A-204ENST00000472959 TAS2R5Q9NYW4 299 aa18.39■□□□□ 0.53
TOP3A-204ENST00000472959 PRSS50Q9UI38 385 aa18.39■□□□□ 0.53
TOP3A-204ENST00000472959 GPR52Q9Y2T5 361 aa18.39■□□□□ 0.53
TOP3A-204ENST00000472959 TCRBV3S1A0A5B6 114 aa18.38■□□□□ 0.53
TOP3A-204ENST00000472959 TUBAL3A6NHL2 446 aa18.38■□□□□ 0.53
TOP3A-204ENST00000472959 EFCAB9A8MZ26 197 aa18.38■□□□□ 0.53
TOP3A-204ENST00000472959 BLOC1S5-TXNDC5H3BN57 136 aa18.38■□□□□ 0.53
TOP3A-204ENST00000472959 HNRNPRO43390 633 aaKnown RBP18.38■□□□□ 0.53
TOP3A-204ENST00000472959 TRAF3IP2O43734 574 aaPredicted RBP18.38■□□□□ 0.53
TOP3A-204ENST00000472959 PSMB1P20618 241 aaKnown RBP18.38■□□□□ 0.53
TOP3A-204ENST00000472959 EDNRAP25101 427 aa18.38■□□□□ 0.53
TOP3A-204ENST00000472959 RRM2P31350 389 aa18.38■□□□□ 0.53
TOP3A-204ENST00000472959 KIR2DL3P43628 341 aa18.38■□□□□ 0.53
TOP3A-204ENST00000472959 SLC9A3P48764 834 aa18.38■□□□□ 0.53
TOP3A-204ENST00000472959 HMGA2P52926 109 aa18.38■□□□□ 0.53
TOP3A-204ENST00000472959 CLDN17P56750 224 aa18.38■□□□□ 0.53
TOP3A-204ENST00000472959 POU3F1Q03052 451 aaPredicted RBP18.38■□□□□ 0.53
TOP3A-204ENST00000472959 NHLRC1Q6VVB1 395 aa18.38■□□□□ 0.53
TOP3A-204ENST00000472959 STAC2Q6ZMT1 411 aa18.38■□□□□ 0.53
TOP3A-204ENST00000472959 UBE2J2Q8N2K1 259 aa18.38■□□□□ 0.53
TOP3A-204ENST00000472959 POMGNT2Q8NAT1 580 aa18.38■□□□□ 0.53
TOP3A-204ENST00000472959 CANT1Q8WVQ1 401 aa18.38■□□□□ 0.53
TOP3A-204ENST00000472959 CHID1Q9BWS9 393 aa18.38■□□□□ 0.53
TOP3A-204ENST00000472959 OR10A4Q9H209 315 aa18.38■□□□□ 0.53
TOP3A-204ENST00000472959 MALT1Q9UDY8 824 aa18.38■□□□□ 0.53
TOP3A-204ENST00000472959 NDRG3Q9UGV2 375 aa18.38■□□□□ 0.53
TOP3A-204ENST00000472959 TMCC3Q9ULS5 477 aa18.38■□□□□ 0.53
TOP3A-204ENST00000472959 AURKCQ9UQB9 309 aa18.38■□□□□ 0.53
TOP3A-204ENST00000472959 SH3PXD2BA1X283 911 aa18.37■□□□□ 0.53
TOP3A-204ENST00000472959 RNF13O43567 381 aa18.37■□□□□ 0.53
TOP3A-204ENST00000472959 ADAP00813 363 aa18.37■□□□□ 0.53
TOP3A-204ENST00000472959 TSPAN19P0C672 248 aa18.37■□□□□ 0.53
TOP3A-204ENST00000472959 SAGP10523 405 aaPredicted RBP18.37■□□□□ 0.53
TOP3A-204ENST00000472959 MAKP20794 623 aa18.37■□□□□ 0.53
TOP3A-204ENST00000472959 ITGADQ13349 1161 aa18.37■□□□□ 0.53
TOP3A-204ENST00000472959 SEC23BQ15437 767 aa18.37■□□□□ 0.53
TOP3A-204ENST00000472959 ZC3HAV1Q7Z2W4 902 aaKnown RBP18.37■□□□□ 0.53
TOP3A-204ENST00000472959 OR4K5Q8NGD3 323 aa18.37■□□□□ 0.53
TOP3A-204ENST00000472959 FAM222BQ8WU58 562 aa18.37■□□□□ 0.53
TOP3A-204ENST00000472959 ALPK1Q96QP1 1244 aa18.37■□□□□ 0.53
TOP3A-204ENST00000472959 USB1Q9BQ65 265 aaKnown RBP18.37■□□□□ 0.53
TOP3A-204ENST00000472959 SLCO5A1Q9H2Y9 848 aa18.37■□□□□ 0.53
TOP3A-204ENST00000472959 YY1AP1Q9H869 796 aa18.37■□□□□ 0.53
TOP3A-204ENST00000472959 ASB6Q9NWX5 421 aa18.37■□□□□ 0.53
TOP3A-204ENST00000472959 UPB1Q9UBR1 384 aa18.37■□□□□ 0.53
TOP3A-204ENST00000472959 KCNN3Q9UGI6 736 aa18.37■□□□□ 0.53
TOP3A-204ENST00000472959 C11orf98E9PRG8 122 aa18.36■□□□□ 0.53
TOP3A-204ENST00000472959 CIB2O75838 187 aa18.36■□□□□ 0.53
TOP3A-204ENST00000472959 ZNF432O94892 652 aa18.36■□□□□ 0.53
TOP3A-204ENST00000472959 HLA-DOBP13765 273 aa18.36■□□□□ 0.53
TOP3A-204ENST00000472959 PPP3CBP16298 524 aa18.36■□□□□ 0.53
TOP3A-204ENST00000472959 IFNGR2P38484 337 aa18.36■□□□□ 0.53
TOP3A-204ENST00000472959 SELENOPP49908 381 aa18.36■□□□□ 0.53
TOP3A-204ENST00000472959 HCFC1P51610 2035 aa18.36■□□□□ 0.53
TOP3A-204ENST00000472959 RPL18Q07020 188 aaKnown RBP18.36■□□□□ 0.53
TOP3A-204ENST00000472959 SFRP5Q5T4F7 317 aa18.36■□□□□ 0.53
TOP3A-204ENST00000472959 TSPO2Q5TGU0 170 aa18.36■□□□□ 0.53
TOP3A-204ENST00000472959 C1orf146Q5VVC0 180 aa18.36■□□□□ 0.53
TOP3A-204ENST00000472959 HIST2H2BCQ6DN03 193 aa18.36■□□□□ 0.53
TOP3A-204ENST00000472959 OR2T5Q6IEZ7 315 aa18.36■□□□□ 0.53
TOP3A-204ENST00000472959 NIPAL3Q6P499 406 aa18.36■□□□□ 0.53
TOP3A-204ENST00000472959 ABHD12BQ7Z5M8 362 aaPredicted RBP18.36■□□□□ 0.53
TOP3A-204ENST00000472959 OAFQ86UD1 273 aa18.36■□□□□ 0.53
TOP3A-204ENST00000472959 CXorf67Q86X51 503 aaPredicted RBP18.36■□□□□ 0.53
TOP3A-204ENST00000472959 LINC00471Q8N535 108 aa18.36■□□□□ 0.53
TOP3A-204ENST00000472959 STEAP2Q8NFT2 490 aa18.36■□□□□ 0.53
TOP3A-204ENST00000472959 OR2T29Q8NH02 315 aa18.36■□□□□ 0.53
TOP3A-204ENST00000472959 SLC7A10Q9NS82 523 aa18.36■□□□□ 0.53
TOP3A-204ENST00000472959 HIF3AQ9Y2N7 669 aa18.36■□□□□ 0.53
TOP3A-204ENST00000472959 ADGRG4Q8IZF6 3080 aa18.35■□□□□ 0.53
TOP3A-204ENST00000472959 ZNF726A6NNF4 738 aa18.35■□□□□ 0.53
TOP3A-204ENST00000472959 TNFRSF11BO00300 401 aa18.35■□□□□ 0.53
TOP3A-204ENST00000472959 SLC43A1O75387 559 aa18.35■□□□□ 0.53
TOP3A-204ENST00000472959 IGHV3-9P01782 118 aa18.35■□□□□ 0.53
TOP3A-204ENST00000472959 COX5AP20674 150 aa18.35■□□□□ 0.53
TOP3A-204ENST00000472959 AQP2P41181 271 aa18.35■□□□□ 0.53
TOP3A-204ENST00000472959 OMPP47874 163 aa18.35■□□□□ 0.53
TOP3A-204ENST00000472959 LIMS1P48059 325 aa18.35■□□□□ 0.53
TOP3A-204ENST00000472959 RPS4XP62701 263 aaKnown RBP18.35■□□□□ 0.53
TOP3A-204ENST00000472959 SNTB1Q13884 538 aaKnown RBP18.35■□□□□ 0.53
TOP3A-204ENST00000472959 GK3PQ14409 553 aa18.35■□□□□ 0.53
TOP3A-204ENST00000472959 KISS1RQ969F8 398 aaPredicted RBP18.35■□□□□ 0.53
TOP3A-204ENST00000472959 ADAD1Q96M93 576 aaKnown RBP18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms