RNA–Protein interactions for RNA: ENST00000471727.3

APLF-204, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 1 (best)

Gene APLF, Length 1,633 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-204ENST00000471727 LMF1Q96S06 567 aa9.67□□□□□ -0.86
APLF-204ENST00000471727 ABCG5Q9H222 651 aa9.67□□□□□ -0.86
APLF-204ENST00000471727 TTYH1Q9H313 450 aaPredicted RBP9.67□□□□□ -0.86
APLF-204ENST00000471727 ZNF768Q9H5H4 540 aaKnown RBP9.67□□□□□ -0.86
APLF-204ENST00000471727 NIPAL2Q9H841 368 aa9.67□□□□□ -0.86
APLF-204ENST00000471727 WDR76Q9H967 626 aa9.67□□□□□ -0.86
APLF-204ENST00000471727 MARCH7Q9H992 704 aa9.67□□□□□ -0.86
APLF-204ENST00000471727 BRD7Q9NPI1 651 aa9.67□□□□□ -0.86
APLF-204ENST00000471727 ACOXLQ9NUZ1 547 aa9.67□□□□□ -0.86
APLF-204ENST00000471727 UCKL1Q9NWZ5 548 aa9.67□□□□□ -0.86
APLF-204ENST00000471727 DHCR7Q9UBM7 475 aaKnown RBP9.67□□□□□ -0.86
APLF-204ENST00000471727 NUFIP1Q9UHK0 495 aaKnown RBP9.67□□□□□ -0.86
APLF-204ENST00000471727 CACNG2Q9Y698 323 aa9.67□□□□□ -0.86
APLF-204ENST00000471727 OR6C70A6NIJ9 312 aa9.66□□□□□ -0.86
APLF-204ENST00000471727 AIPO00170 330 aa9.66□□□□□ -0.86
APLF-204ENST00000471727 XKRYO14609 159 aa9.66□□□□□ -0.86
APLF-204ENST00000471727 OR2T1O43869 369 aa9.66□□□□□ -0.86
APLF-204ENST00000471727 SDC3O75056 442 aa9.66□□□□□ -0.86
APLF-204ENST00000471727 CALCBP10092 127 aa9.66□□□□□ -0.86
APLF-204ENST00000471727 FOLR1P15328 257 aa9.66□□□□□ -0.86
APLF-204ENST00000471727 ATF1P18846 271 aa9.66□□□□□ -0.86
APLF-204ENST00000471727 S100A1P23297 94 aa9.66□□□□□ -0.86
APLF-204ENST00000471727 ITPKBP27987 946 aa9.66□□□□□ -0.86
APLF-204ENST00000471727 ACY1Q03154 408 aa9.66□□□□□ -0.86
APLF-204ENST00000471727 LTBQ06643 244 aa9.66□□□□□ -0.86
APLF-204ENST00000471727 MFSD13AQ14CX5 517 aa9.66□□□□□ -0.86
APLF-204ENST00000471727 SGCBQ16585 318 aa9.66□□□□□ -0.86
APLF-204ENST00000471727 SLC25A35Q3KQZ1 300 aa9.66□□□□□ -0.86
APLF-204ENST00000471727 SLC22A10Q63ZE4 541 aa9.66□□□□□ -0.86
APLF-204ENST00000471727 C9orf40Q8IXQ3 194 aa9.66□□□□□ -0.86
APLF-204ENST00000471727 TOMM5Q8N4H5 51 aa9.66□□□□□ -0.86
APLF-204ENST00000471727 ZNF671Q8TAW3 534 aa9.66□□□□□ -0.86
APLF-204ENST00000471727 SMAP2Q8WU79 429 aaPredicted RBP9.66□□□□□ -0.86
APLF-204ENST00000471727 ASB17Q8WXJ9 295 aa9.66□□□□□ -0.86
APLF-204ENST00000471727 TMEM234Q8WY98 164 aa9.66□□□□□ -0.86
APLF-204ENST00000471727 TAAR8Q969N4 342 aa9.66□□□□□ -0.86
APLF-204ENST00000471727 CLDN23Q96B33 292 aa9.66□□□□□ -0.86
APLF-204ENST00000471727 ZNF501Q96CX3 271 aaPredicted RBP9.66□□□□□ -0.86
APLF-204ENST00000471727 OMA1Q96E52 524 aa9.66□□□□□ -0.86
APLF-204ENST00000471727 MOGAT1Q96PD6 335 aa9.66□□□□□ -0.86
APLF-204ENST00000471727 IER2Q9BTL4 223 aa9.66□□□□□ -0.86
APLF-204ENST00000471727 ACTR6Q9GZN1 396 aa9.66□□□□□ -0.86
APLF-204ENST00000471727 TP63Q9H3D4 680 aaPredicted RBP9.66□□□□□ -0.86
APLF-204ENST00000471727 DPAGT1Q9H3H5 408 aa9.66□□□□□ -0.86
APLF-204ENST00000471727 LAMP5Q9UJQ1 280 aa9.66□□□□□ -0.86
APLF-204ENST00000471727 ZNF346Q9UL40 294 aaKnown RBP9.66□□□□□ -0.86
APLF-204ENST00000471727 NUBP2Q9Y5Y2 271 aa9.66□□□□□ -0.86
APLF-204ENST00000471727 ALG5Q9Y673 324 aa9.66□□□□□ -0.86
APLF-204ENST00000471727 FKBP7Q9Y680 259 aa9.66□□□□□ -0.86
APLF-204ENST00000471727 SCN2AQ99250 2005 aa9.65□□□□□ -0.86
APLF-204ENST00000471727 A8MVM7 634 aa9.65□□□□□ -0.86
APLF-204ENST00000471727 CENPBD1B2RD01 187 aa9.65□□□□□ -0.86
APLF-204ENST00000471727 FADS1O60427 444 aa9.65□□□□□ -0.86
APLF-204ENST00000471727 ECDO95905 644 aaPredicted RBP9.65□□□□□ -0.86
APLF-204ENST00000471727 PAHP00439 452 aa9.65□□□□□ -0.86
APLF-204ENST00000471727 RAB40ALP0C0E4 278 aa9.65□□□□□ -0.86
APLF-204ENST00000471727 ARSBP15848 533 aa9.65□□□□□ -0.86
APLF-204ENST00000471727 PRKCAP17252 672 aa9.65□□□□□ -0.86
APLF-204ENST00000471727 MST1P26927 711 aa9.65□□□□□ -0.86
APLF-204ENST00000471727 HOXD12P35452 270 aa9.65□□□□□ -0.86
APLF-204ENST00000471727 ARRB1P49407 418 aaPredicted RBP9.65□□□□□ -0.86
APLF-204ENST00000471727 SLC26A5P58743 744 aa9.65□□□□□ -0.86
APLF-204ENST00000471727 RRAS2P62070 204 aaPredicted RBP9.65□□□□□ -0.86
APLF-204ENST00000471727 CFHR1Q03591 330 aa9.65□□□□□ -0.86
APLF-204ENST00000471727 ZP2Q05996 745 aa9.65□□□□□ -0.86
APLF-204ENST00000471727 RASGEF1BQ0VAM2 473 aa9.65□□□□□ -0.86
APLF-204ENST00000471727 CDK10Q15131 360 aa9.65□□□□□ -0.86
APLF-204ENST00000471727 Q499Y3 187 aa9.65□□□□□ -0.86
APLF-204ENST00000471727 PLA1AQ53H76 456 aa9.65□□□□□ -0.86
APLF-204ENST00000471727 FAM69AQ5T7M9 428 aa9.65□□□□□ -0.86
APLF-204ENST00000471727 RHBDD2Q6NTF9 364 aa9.65□□□□□ -0.86
APLF-204ENST00000471727 FDX2Q6P4F2 183 aa9.65□□□□□ -0.86
APLF-204ENST00000471727 TMEM71Q6P5X7 295 aa9.65□□□□□ -0.86
APLF-204ENST00000471727 LRRN1Q6UXK5 716 aa9.65□□□□□ -0.86
APLF-204ENST00000471727 GRINAQ7Z429 371 aa9.65□□□□□ -0.86
APLF-204ENST00000471727 UBE2J2Q8N2K1 259 aa9.65□□□□□ -0.86
APLF-204ENST00000471727 RFLNBQ8N5W9 214 aa9.65□□□□□ -0.86
APLF-204ENST00000471727 YIPF7Q8N8F6 280 aa9.65□□□□□ -0.86
APLF-204ENST00000471727 OR5AK2Q8NH90 309 aa9.65□□□□□ -0.86
APLF-204ENST00000471727 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.65□□□□□ -0.86
APLF-204ENST00000471727 ZNRF4Q8WWF5 429 aa9.65□□□□□ -0.86
APLF-204ENST00000471727 RAB40AQ8WXH6 277 aa9.65□□□□□ -0.86
APLF-204ENST00000471727 AKAP1Q92667 903 aaKnown RBP eCLIP9.65□□□□□ -0.86
APLF-204ENST00000471727 KTI12Q96EK9 354 aaPredicted RBP9.65□□□□□ -0.86
APLF-204ENST00000471727 TSPAN32Q96QS1 320 aa9.65□□□□□ -0.86
APLF-204ENST00000471727 OR14A2Q96R54 314 aa9.65□□□□□ -0.86
APLF-204ENST00000471727 ABHD1Q96SE0 405 aa9.65□□□□□ -0.86
APLF-204ENST00000471727 INTS14Q96SY0 518 aa9.65□□□□□ -0.86
APLF-204ENST00000471727 DUSP23Q9BVJ7 150 aa9.65□□□□□ -0.86
APLF-204ENST00000471727 VN1R1Q9GZP7 353 aa9.65□□□□□ -0.86
APLF-204ENST00000471727 COMMD4Q9H0A8 199 aa9.65□□□□□ -0.86
APLF-204ENST00000471727 SLA2Q9H6Q3 261 aa9.65□□□□□ -0.86
APLF-204ENST00000471727 SRA1Q9HD15 236 aaKnown RBP9.65□□□□□ -0.86
APLF-204ENST00000471727 NOX4Q9NPH5 578 aa9.65□□□□□ -0.86
APLF-204ENST00000471727 FGF21Q9NSA1 209 aa9.65□□□□□ -0.86
APLF-204ENST00000471727 MRPL39Q9NYK5 338 aaKnown RBP9.65□□□□□ -0.86
APLF-204ENST00000471727 MKL2Q9ULH7 1088 aa9.65□□□□□ -0.86
APLF-204ENST00000471727 PCDHGA9Q9Y5G4 932 aaKnown RBP9.65□□□□□ -0.86
APLF-204ENST00000471727 ETV7Q9Y603 341 aa9.65□□□□□ -0.86
APLF-204ENST00000471727 V9GY05 133 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms