RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 KIR2DS3Q14952 304 aa12.32□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 PLPP6Q8IY26 295 aa12.32□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 XRN1Q8IZH2 1706 aaKnown RBP12.32□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 OR4F15Q8NGB8 312 aa12.32□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 TMEM40Q8WWA1 233 aa12.32□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 TCTN2Q96GX1 697 aa12.32□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 UBQLN4Q9NRR5 601 aa12.32□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 CLEC5AQ9NY25 188 aa12.32□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 ENPP4Q9Y6X5 453 aa12.32□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 PLIN4Q96Q06 1357 aa12.32□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 HNF1AP20823 631 aa12.32□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 ITGB7P26010 798 aa12.32□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 CEBPDP49716 269 aaPredicted RBP12.32□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 CTBSQ01459 385 aa12.32□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 YIF1BQ5BJH7 314 aa12.32□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 NHSL2Q5HYW2 709 aa12.32□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 OR8G2PQ6IF36 304 aa12.32□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 NARFLQ9H6Q4 476 aa12.32□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 PTTG3PQ9NZH4 202 aa12.32□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 IGKV6D-41A0A0C4DH26 115 aa12.32□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 ZNF815PA8K554 130 aa12.32□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 GJB3O75712 270 aa12.32□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 ALKBH6Q3KRA9 238 aa12.32□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 MFSD12Q6NUT3 480 aa12.32□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 TIFABQ6ZNK6 161 aa12.32□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 LINC00346Q8IVM7 164 aa12.32□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 ZNF334Q9HCZ1 680 aaPredicted RBP12.32□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 ARL2-SNX15V9GYD0 113 aa12.32□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 CHD2O14647 1828 aaKnown RBP12.32□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 KIR2DS5A0A0G2JLQ3 304 aa12.32□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 A0A0G2JNG1 304 aa12.32□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 ZNF587BE7ETH6 402 aa12.32□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 H0YAE9 185 aa12.32□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 KIR2DS3K7RE56 304 aa12.32□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 DNASE2O00115 360 aaPredicted RBP12.32□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 FOXE1O00358 373 aaPredicted RBP12.32□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 CALCBP10092 127 aa12.32□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 SLC1A3P43003 542 aa12.32□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 OR1D5P58170 312 aa12.32□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 JAG1P78504 1218 aa12.32□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 KIR2DS5Q14953 304 aa12.32□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 HSF5Q4G112 596 aaPredicted RBP12.32□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 SSX9Q7RTT3 188 aa12.32□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 OR2M2Q96R28 347 aa12.32□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 VPS25Q9BRG1 176 aa12.32□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 C1orf198Q9H425 327 aa12.32□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 AIG1Q9NVV5 245 aa12.32□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 ADAMTS6Q9UKP5 1117 aa12.32□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 SPO11Q9Y5K1 396 aa12.32□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 HCFC2Q9Y5Z7 792 aa12.32□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 HAX1O00165 279 aa12.32□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 CT45A10P0DMU9 189 aa12.32□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 GUK1Q16774 197 aa12.32□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 ARHGAP11BQ3KRB8 267 aa12.32□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 OPN5Q6U736 354 aa12.32□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 UMODL1-AS1Q8N2C9 162 aa12.32□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 FRMD1Q8N878 549 aa12.32□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 ZNF417Q8TAU3 575 aa12.32□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 CD300AQ9UGN4 299 aa12.32□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 ZNF816-ZNF321PA0A0X1KG74 233 aa12.31□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 ENPP1P22413 925 aa12.31□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 OR1Q1Q15612 314 aa12.31□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 SLC36A2Q495M3 483 aa12.31□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 TIGD3Q6B0B8 471 aa12.31□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 PODNL1Q6PEZ8 512 aa12.31□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 GCNT2Q8N0V5 402 aa12.31□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 ZNF321PQ8N8H1 164 aa12.31□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 OR4M1Q8NGD0 313 aa12.31□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 ZBTB8AQ96BR9 441 aa12.31□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 OR7D2Q96RA2 312 aa12.31□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 MED18Q9BUE0 208 aa12.31□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 DEFB127Q9H1M4 99 aa12.31□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 DOCK6Q96HP0 2047 aa12.31□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 OR6C65A6NJZ3 312 aa12.31□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 OLFM2O95897 454 aa12.31□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 SLC5A2P31639 672 aa12.31□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 HTR6P50406 440 aa12.31□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 TAS2R31P59538 309 aa12.31□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 MRPL2Q5T653 305 aaKnown RBP12.31□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 CLEC14AQ86T13 490 aa12.31□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 LRRTM3Q86VH5 581 aa12.31□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 AGPAT4Q9NRZ5 378 aa12.31□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 HHLA2Q9UM44 414 aa12.31□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 V9GY05 133 aa12.31□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 TPT1P13693 172 aaKnown RBP12.31□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 TRILQ7L0X0 811 aa12.31□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 KDM8Q8N371 416 aa12.31□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 BOD1Q96IK1 185 aa12.31□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 SLC25A31Q9H0C2 315 aa12.31□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 ZNF576Q9H609 170 aa12.31□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 NOX3Q9HBY0 568 aa12.31□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 ENTPD2Q9Y5L3 495 aa12.31□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 RFC3P40938 356 aa12.31□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 CLDN12P56749 244 aa12.31□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 CLINT1Q14677 625 aa12.31□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 METTL11BQ5VVY1 283 aa12.31□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.31□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 PDZD3Q86UT5 571 aa12.31□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 GAL3ST2Q9H3Q3 398 aa12.31□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 CLCF1Q9UBD9 225 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms