RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 ZNF440Q8IYI8 595 aa5.06□□□□□ -1.6
SMC5-202ENST00000471372 PRR22Q8IZ63 422 aa5.06□□□□□ -1.6
SMC5-202ENST00000471372 CADM2Q8N3J6 435 aa5.06□□□□□ -1.6
SMC5-202ENST00000471372 FNDC5Q8NAU1 212 aa5.06□□□□□ -1.6
SMC5-202ENST00000471372 RHEBL1Q8TAI7 183 aa5.06□□□□□ -1.6
SMC5-202ENST00000471372 GTSF1Q8WW33 167 aa5.06□□□□□ -1.6
SMC5-202ENST00000471372 C8orf44Q96CB5 159 aa5.06□□□□□ -1.6
SMC5-202ENST00000471372 VSIG2Q96IQ7 327 aa5.06□□□□□ -1.6
SMC5-202ENST00000471372 APOL2Q9BQE5 337 aa5.06□□□□□ -1.6
SMC5-202ENST00000471372 ADAP2Q9NPF8 381 aa5.06□□□□□ -1.6
SMC5-202ENST00000471372 GPATCH2LQ9NWQ4 482 aa5.06□□□□□ -1.6
SMC5-202ENST00000471372 MDFICQ9P1T7 246 aa5.06□□□□□ -1.6
SMC5-202ENST00000471372 KLHL21Q9UJP4 597 aa5.06□□□□□ -1.6
SMC5-202ENST00000471372 N6AMT1Q9Y5N5 214 aa5.06□□□□□ -1.6
SMC5-202ENST00000471372 V9GY05 133 aa5.06□□□□□ -1.6
SMC5-202ENST00000471372 A6NIZ1 184 aa5.05□□□□□ -1.6
SMC5-202ENST00000471372 HUS1O60921 280 aa5.05□□□□□ -1.6
SMC5-202ENST00000471372 FGF1P05230 155 aa5.05□□□□□ -1.6
SMC5-202ENST00000471372 S100A9P06702 114 aaKnown RBP5.05□□□□□ -1.6
SMC5-202ENST00000471372 TPM1P09493 284 aa5.05□□□□□ -1.6
SMC5-202ENST00000471372 MYL2P10916 166 aa5.05□□□□□ -1.6
SMC5-202ENST00000471372 EIF2S2P20042 333 aaKnown RBP5.05□□□□□ -1.6
SMC5-202ENST00000471372 KLK7P49862 253 aa5.05□□□□□ -1.6
SMC5-202ENST00000471372 RAP1BP61224 184 aa5.05□□□□□ -1.6
SMC5-202ENST00000471372 PRR4Q16378 134 aa5.05□□□□□ -1.6
SMC5-202ENST00000471372 HSDL1Q3SXM5 330 aa5.05□□□□□ -1.6
SMC5-202ENST00000471372 TIGD3Q6B0B8 471 aa5.05□□□□□ -1.6
SMC5-202ENST00000471372 OR52W1Q6IF63 320 aa5.05□□□□□ -1.6
SMC5-202ENST00000471372 C6orf223Q8N319 242 aa5.05□□□□□ -1.6
SMC5-202ENST00000471372 POM121L12Q8N7R1 296 aa5.05□□□□□ -1.6
SMC5-202ENST00000471372 OR9G4Q8NGQ1 327 aa5.05□□□□□ -1.6
SMC5-202ENST00000471372 AGAP11Q8TF27 550 aa5.05□□□□□ -1.6
SMC5-202ENST00000471372 RASL10AQ92737 203 aa5.05□□□□□ -1.6
SMC5-202ENST00000471372 SLC25A38Q96DW6 304 aa5.05□□□□□ -1.6
SMC5-202ENST00000471372 TMEM246Q9BRR3 403 aa5.05□□□□□ -1.6
SMC5-202ENST00000471372 NAT9Q9BTE0 207 aa5.05□□□□□ -1.6
SMC5-202ENST00000471372 TRIM15Q9C019 465 aa5.05□□□□□ -1.6
SMC5-202ENST00000471372 TDRD3Q9H7E2 651 aaKnown RBP5.05□□□□□ -1.6
SMC5-202ENST00000471372 PXMP2Q9NR77 195 aa5.05□□□□□ -1.6
SMC5-202ENST00000471372 TRAF3IP3Q9Y228 551 aa5.05□□□□□ -1.6
SMC5-202ENST00000471372 KIR2DL5BA0A0G2JN68 375 aa5.04□□□□□ -1.6
SMC5-202ENST00000471372 KIR2DL5BA0A0G2JPC4 375 aa5.04□□□□□ -1.6
SMC5-202ENST00000471372 SIRPB1O00241 398 aa5.04□□□□□ -1.6
SMC5-202ENST00000471372 SPOPO43791 374 aa5.04□□□□□ -1.6
SMC5-202ENST00000471372 SOX15O60248 233 aa5.04□□□□□ -1.6
SMC5-202ENST00000471372 FLOT1O75955 427 aa5.04□□□□□ -1.6
SMC5-202ENST00000471372 CSTAP01040 98 aa5.04□□□□□ -1.6
SMC5-202ENST00000471372 C2P06681 752 aa5.04□□□□□ -1.6
SMC5-202ENST00000471372 CCDC166P0CW27 439 aa5.04□□□□□ -1.6
SMC5-202ENST00000471372 PRKACAP17612 351 aa5.04□□□□□ -1.6
SMC5-202ENST00000471372 SLC2A5P22732 501 aa5.04□□□□□ -1.6
SMC5-202ENST00000471372 CXCR2P25025 360 aa5.04□□□□□ -1.6
SMC5-202ENST00000471372 UGT1A3P35503 534 aa5.04□□□□□ -1.6
SMC5-202ENST00000471372 SLC1A2P43004 574 aa5.04□□□□□ -1.6
SMC5-202ENST00000471372 NKAIN1Q4KMZ8 207 aa5.04□□□□□ -1.6
SMC5-202ENST00000471372 ZNF772Q68DY9 489 aaPredicted RBP5.04□□□□□ -1.6
SMC5-202ENST00000471372 WDR74Q6RFH5 385 aaPredicted RBP5.04□□□□□ -1.6
SMC5-202ENST00000471372 UNQ9370/PRO34162Q6UXP9 181 aa5.04□□□□□ -1.6
SMC5-202ENST00000471372 BHLHA9Q7RTU4 235 aa5.04□□□□□ -1.6
SMC5-202ENST00000471372 PLA2G4DQ86XP0 818 aa5.04□□□□□ -1.6
SMC5-202ENST00000471372 KRTAP7-1Q8IUC3 87 aa5.04□□□□□ -1.6
SMC5-202ENST00000471372 APOBEC3FQ8IUX4 373 aaKnown RBP5.04□□□□□ -1.6
SMC5-202ENST00000471372 KIR2DL5AQ8N109 375 aa5.04□□□□□ -1.6
SMC5-202ENST00000471372 BBS1Q8NFJ9 593 aa5.04□□□□□ -1.6
SMC5-202ENST00000471372 OR2G2Q8NGZ5 317 aa5.04□□□□□ -1.6
SMC5-202ENST00000471372 KIR2DL5BQ8NHK3 375 aa5.04□□□□□ -1.6
SMC5-202ENST00000471372 DTX3LQ8TDB6 740 aa5.04□□□□□ -1.6
SMC5-202ENST00000471372 CAPSLQ8WWF8 208 aa5.04□□□□□ -1.6
SMC5-202ENST00000471372 FGGYQ96C11 551 aa5.04□□□□□ -1.6
SMC5-202ENST00000471372 ITCHQ96J02 903 aa5.04□□□□□ -1.6
SMC5-202ENST00000471372 FBXO44Q9H4M3 255 aa5.04□□□□□ -1.6
SMC5-202ENST00000471372 CWH43Q9H720 699 aa5.04□□□□□ -1.6
SMC5-202ENST00000471372 TREM2Q9NZC2 230 aa5.04□□□□□ -1.6
SMC5-202ENST00000471372 FLVCR1Q9Y5Y0 555 aa5.04□□□□□ -1.6
SMC5-202ENST00000471372 CNTNAP1P78357 1384 aa5.04□□□□□ -1.6
SMC5-202ENST00000471372 CFAP65Q6ZU64 1925 aaKnown RBP5.03□□□□□ -1.6
SMC5-202ENST00000471372 IGLV8-61A0A075B6I0 122 aa5.03□□□□□ -1.6
SMC5-202ENST00000471372 TRBV9A0A0B4J1U6 114 aa5.03□□□□□ -1.6
SMC5-202ENST00000471372 KBTBD11-OT1A0A1B0GTJ5 212 aa5.03□□□□□ -1.6
SMC5-202ENST00000471372 KRTAP16-1A8MUX0 517 aa5.03□□□□□ -1.6
SMC5-202ENST00000471372 TRDMT1O14717 391 aaKnown RBP5.03□□□□□ -1.6
SMC5-202ENST00000471372 AIREO43918 545 aa5.03□□□□□ -1.6
SMC5-202ENST00000471372 ZNF354AO60765 605 aaPredicted RBP5.03□□□□□ -1.6
SMC5-202ENST00000471372 CLIC3O95833 236 aa5.03□□□□□ -1.6
SMC5-202ENST00000471372 MSR1P21757 451 aa5.03□□□□□ -1.6
SMC5-202ENST00000471372 GDF1P27539 372 aa5.03□□□□□ -1.6
SMC5-202ENST00000471372 NTSP30990 170 aa5.03□□□□□ -1.6
SMC5-202ENST00000471372 BMI1P35226 326 aa5.03□□□□□ -1.6
SMC5-202ENST00000471372 SLC26A2P50443 739 aa5.03□□□□□ -1.6
SMC5-202ENST00000471372 CGB2Q6NT52 195 aa5.03□□□□□ -1.6
SMC5-202ENST00000471372 C16orf87Q6PH81 154 aa5.03□□□□□ -1.6
SMC5-202ENST00000471372 PRSS41Q7RTY9 318 aa5.03□□□□□ -1.6
SMC5-202ENST00000471372 ZNF571Q7Z3V5 609 aaPredicted RBP5.03□□□□□ -1.6
SMC5-202ENST00000471372 VTCN1Q7Z7D3 282 aa5.03□□□□□ -1.6
SMC5-202ENST00000471372 ZNF546Q86UE3 836 aa5.03□□□□□ -1.6
SMC5-202ENST00000471372 ZNF100Q8IYN0 542 aa5.03□□□□□ -1.6
SMC5-202ENST00000471372 IQCKQ8N0W5 287 aa5.03□□□□□ -1.6
SMC5-202ENST00000471372 PUSL1Q8N0Z8 303 aaKnown RBP5.03□□□□□ -1.6
SMC5-202ENST00000471372 SMARCD2Q92925 531 aa5.03□□□□□ -1.6
SMC5-202ENST00000471372 SH3GL1Q99961 368 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms