RNA–Protein interactions for RNA: ENST00000471188.5

VPS50-210, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,254 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-210ENST00000471188 TBX18O95935 607 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 TGFB1P01137 390 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 IL3P08700 152 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 GAAP10253 952 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 GALP22466 123 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 AOAHP28039 575 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 PCSK1P29120 753 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 HTR1FP30939 366 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 TIA1P31483 386 aaKnown RBP eCLIP3.89□□□□□ -1.79
VPS50-210ENST00000471188 GRK4P32298 578 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 OMPP47874 163 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 LHX1P48742 406 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 CEBPGP53567 150 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 PRKAG1P54619 331 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 MANFP55145 182 aaKnown RBP3.89□□□□□ -1.79
VPS50-210ENST00000471188 INPP5JQ15735 1006 aaPredicted RBP3.89□□□□□ -1.79
VPS50-210ENST00000471188 MAJINQ3KP22 176 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 TP53I3Q53FA7 332 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 ZNF805Q5CZA5 627 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 MS4A13Q5J8X5 152 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 RAB41Q5JT25 222 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 C10orf91Q5T1B1 145 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 LDLRAD1Q5T700 205 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 TMEM244Q5VVB8 128 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 PRAMEF9Q5VWM5 478 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 DHRS11Q6UWP2 260 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 LINGO4Q6UY18 593 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 IL34Q6ZMJ4 242 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 ZNF813Q6ZN06 617 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 SLC36A1Q7Z2H8 476 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 CDK20Q8IZL9 346 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 RNF113BQ8IZP6 322 aaKnown RBP3.89□□□□□ -1.79
VPS50-210ENST00000471188 BPIFB2Q8N4F0 458 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 TEX26Q8N6G2 289 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 RASGEF1AQ8N9B8 481 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 OR6T1Q8NGN1 323 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 OR14K1Q8NGZ2 314 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 OR56A3Q8NH54 315 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 OR10J5Q8NHC4 309 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 NEIL2Q969S2 332 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 TCTN2Q96GX1 697 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 RBM18Q96H35 190 aaKnown RBP3.89□□□□□ -1.79
VPS50-210ENST00000471188 KIRREL1Q96J84 757 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 TRMT61BQ9BVS5 477 aaKnown RBP3.89□□□□□ -1.79
VPS50-210ENST00000471188 EIF5A2Q9GZV4 153 aaKnown RBP3.89□□□□□ -1.79
VPS50-210ENST00000471188 UBQLN3Q9H347 655 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 APMAPQ9HDC9 416 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 FAM86C1Q9NVL1 165 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 ZNF223Q9UK11 482 aaPredicted RBP3.89□□□□□ -1.79
VPS50-210ENST00000471188 A4GNTQ9UNA3 340 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 SLC35A3Q9Y2D2 325 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 URGCP-MRPS24S4R325 110 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 A0A087WUU8 490 aa3.88□□□□□ -1.79
VPS50-210ENST00000471188 A0A087WZY1 265 aa3.88□□□□□ -1.79
VPS50-210ENST00000471188 GXYLT2A0PJZ3 443 aa3.88□□□□□ -1.79
VPS50-210ENST00000471188 SMCO3A2RU48 225 aa3.88□□□□□ -1.79
VPS50-210ENST00000471188 RNF222A6NCQ9 220 aa3.88□□□□□ -1.79
VPS50-210ENST00000471188 FAM86C2PA6NEL3 165 aa3.88□□□□□ -1.79
VPS50-210ENST00000471188 TMEM235A6NFC5 223 aa3.88□□□□□ -1.79
VPS50-210ENST00000471188 CASTOR2A6NHX0 329 aa3.88□□□□□ -1.79
VPS50-210ENST00000471188 DRGXA6NNA5 263 aa3.88□□□□□ -1.79
VPS50-210ENST00000471188 H3BRB1 525 aa3.88□□□□□ -1.79
VPS50-210ENST00000471188 ADAM10O14672 748 aa3.88□□□□□ -1.79
VPS50-210ENST00000471188 EREGO14944 169 aa3.88□□□□□ -1.79
VPS50-210ENST00000471188 NPC1O15118 1278 aa3.88□□□□□ -1.79
VPS50-210ENST00000471188 FBXO24O75426 580 aa3.88□□□□□ -1.79
VPS50-210ENST00000471188 HLA-AP01891 365 aaKnown RBP3.88□□□□□ -1.79
VPS50-210ENST00000471188 GYPBP06028 91 aa3.88□□□□□ -1.79
VPS50-210ENST00000471188 ASGR2P07307 311 aa3.88□□□□□ -1.79
VPS50-210ENST00000471188 DCNP07585 359 aaKnown RBP3.88□□□□□ -1.79
VPS50-210ENST00000471188 OR4E1P0C645 316 aa3.88□□□□□ -1.79
VPS50-210ENST00000471188 ALPPL2P10696 532 aa3.88□□□□□ -1.79
VPS50-210ENST00000471188 PPP2R1BP30154 601 aa3.88□□□□□ -1.79
VPS50-210ENST00000471188 MAP3K8P41279 467 aa3.88□□□□□ -1.79
VPS50-210ENST00000471188 ADCYAP1R1P41586 468 aa3.88□□□□□ -1.79
VPS50-210ENST00000471188 BACE1P56817 501 aa3.88□□□□□ -1.79
VPS50-210ENST00000471188 C21orf58P58505 322 aa3.88□□□□□ -1.79
VPS50-210ENST00000471188 HNRNPKP61978 463 aaKnown RBP eCLIP3.88□□□□□ -1.79
VPS50-210ENST00000471188 ACSM1Q08AH1 577 aa3.88□□□□□ -1.79
VPS50-210ENST00000471188 ZNF763Q0D2J5 394 aa3.88□□□□□ -1.79
VPS50-210ENST00000471188 IL10RAQ13651 578 aa3.88□□□□□ -1.79
VPS50-210ENST00000471188 MEF2DQ14814 521 aa3.88□□□□□ -1.79
VPS50-210ENST00000471188 GPNMBQ14956 572 aa3.88□□□□□ -1.79
VPS50-210ENST00000471188 ZNF311Q5JNZ3 666 aa3.88□□□□□ -1.79
VPS50-210ENST00000471188 PIP5KL1Q5T9C9 394 aa3.88□□□□□ -1.79
VPS50-210ENST00000471188 GFI1BQ5VTD9 330 aa3.88□□□□□ -1.79
VPS50-210ENST00000471188 AADACL4Q5VUY2 407 aa3.88□□□□□ -1.79
VPS50-210ENST00000471188 C1orf94Q6P1W5 598 aa3.88□□□□□ -1.79
VPS50-210ENST00000471188 ARHGAP11AQ6P4F7 1023 aa3.88□□□□□ -1.79
VPS50-210ENST00000471188 CERS6Q6ZMG9 384 aa3.88□□□□□ -1.79
VPS50-210ENST00000471188 GLB1L2Q8IW92 636 aa3.88□□□□□ -1.79
VPS50-210ENST00000471188 OR5AP2Q8NGF4 316 aa3.88□□□□□ -1.79
VPS50-210ENST00000471188 PIGXQ8TBF5 258 aa3.88□□□□□ -1.79
VPS50-210ENST00000471188 GPBAR1Q8TDU6 330 aa3.88□□□□□ -1.79
VPS50-210ENST00000471188 NPRL2Q8WTW4 380 aa3.88□□□□□ -1.79
VPS50-210ENST00000471188 TMEM169Q96HH4 297 aa3.88□□□□□ -1.79
VPS50-210ENST00000471188 SAMD8Q96LT4 415 aa3.88□□□□□ -1.79
VPS50-210ENST00000471188 LRFN5Q96NI6 719 aa3.88□□□□□ -1.79
VPS50-210ENST00000471188 OR2M4Q96R27 311 aa3.88□□□□□ -1.79
VPS50-210ENST00000471188 ELF4Q99607 663 aaPredicted RBP3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms