RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 SH3PXD2BA1X283 911 aa11.52□□□□□ -0.57
CPSF4-210ENST00000469897 SLC35F4A4IF30 521 aa11.52□□□□□ -0.57
CPSF4-210ENST00000469897 ZNF503-AS2A6NEH8 195 aa11.52□□□□□ -0.57
CPSF4-210ENST00000469897 VSTM5A8MXK1 200 aa11.52□□□□□ -0.57
CPSF4-210ENST00000469897 NDUFS8O00217 210 aa11.52□□□□□ -0.57
CPSF4-210ENST00000469897 AIM2O14862 343 aa11.52□□□□□ -0.57
CPSF4-210ENST00000469897 PHF1O43189 567 aaPredicted RBP11.52□□□□□ -0.57
CPSF4-210ENST00000469897 SEC14L2O76054 403 aa11.52□□□□□ -0.57
CPSF4-210ENST00000469897 IGKV3-15P01624 115 aa11.52□□□□□ -0.57
CPSF4-210ENST00000469897 HLA-DOBP13765 273 aa11.52□□□□□ -0.57
CPSF4-210ENST00000469897 ZNF16P17020 682 aaPredicted RBP11.52□□□□□ -0.57
CPSF4-210ENST00000469897 THBS4P35443 961 aa11.52□□□□□ -0.57
CPSF4-210ENST00000469897 GZMKP49863 264 aa11.52□□□□□ -0.57
CPSF4-210ENST00000469897 SH3BGRP55822 239 aaPredicted RBP11.52□□□□□ -0.57
CPSF4-210ENST00000469897 C3orf36Q3SXR2 165 aa11.52□□□□□ -0.57
CPSF4-210ENST00000469897 IQCCQ4KMZ1 466 aa11.52□□□□□ -0.57
CPSF4-210ENST00000469897 BEND6Q5SZJ8 279 aaPredicted RBP11.52□□□□□ -0.57
CPSF4-210ENST00000469897 LRIF1Q5T3J3 769 aa11.52□□□□□ -0.57
CPSF4-210ENST00000469897 GCNT6Q5T4J0 391 aa11.52□□□□□ -0.57
CPSF4-210ENST00000469897 CARD17Q5XLA6 110 aa11.52□□□□□ -0.57
CPSF4-210ENST00000469897 ULK3Q6PHR2 472 aa11.52□□□□□ -0.57
CPSF4-210ENST00000469897 DHRS4L2Q6PKH6 230 aa11.52□□□□□ -0.57
CPSF4-210ENST00000469897 C6orf89Q6UWU4 347 aa11.52□□□□□ -0.57
CPSF4-210ENST00000469897 MYPOPQ86VE0 399 aaPredicted RBP11.52□□□□□ -0.57
CPSF4-210ENST00000469897 ZCCHC24Q8N2G6 241 aaKnown RBP11.52□□□□□ -0.57
CPSF4-210ENST00000469897 FAM169BQ8N8A8 192 aa11.52□□□□□ -0.57
CPSF4-210ENST00000469897 PIK3C3Q8NEB9 887 aa11.52□□□□□ -0.57
CPSF4-210ENST00000469897 ANKK1Q8NFD2 765 aa11.52□□□□□ -0.57
CPSF4-210ENST00000469897 OR4F15Q8NGB8 312 aa11.52□□□□□ -0.57
CPSF4-210ENST00000469897 DNAJA4Q8WW22 397 aaPredicted RBP11.52□□□□□ -0.57
CPSF4-210ENST00000469897 SLC38A4Q969I6 547 aa11.52□□□□□ -0.57
CPSF4-210ENST00000469897 MSI2Q96DH6 328 aaKnown RBP11.52□□□□□ -0.57
CPSF4-210ENST00000469897 SPDL1Q96EA4 605 aa11.52□□□□□ -0.57
CPSF4-210ENST00000469897 TXNDC15Q96J42 360 aa11.52□□□□□ -0.57
CPSF4-210ENST00000469897 OR2M2Q96R28 347 aa11.52□□□□□ -0.57
CPSF4-210ENST00000469897 DOK1Q99704 481 aa11.52□□□□□ -0.57
CPSF4-210ENST00000469897 WFDC6Q9BQY6 131 aa11.52□□□□□ -0.57
CPSF4-210ENST00000469897 EMC6Q9BV81 110 aa11.52□□□□□ -0.57
CPSF4-210ENST00000469897 PLK3Q9H4B4 646 aa11.52□□□□□ -0.57
CPSF4-210ENST00000469897 C12orf10Q9HB07 376 aa11.52□□□□□ -0.57
CPSF4-210ENST00000469897 SLCO1B3Q9NPD5 702 aa11.52□□□□□ -0.57
CPSF4-210ENST00000469897 VAPAQ9P0L0 249 aa11.52□□□□□ -0.57
CPSF4-210ENST00000469897 IGHV4-61A0A0C4DH41 118 aa11.51□□□□□ -0.57
CPSF4-210ENST00000469897 LOC102725191A0A1B0GVB3 256 aa11.51□□□□□ -0.57
CPSF4-210ENST00000469897 LOC390937A0A1W2PQ73 354 aa11.51□□□□□ -0.57
CPSF4-210ENST00000469897 M0R3G1 203 aa11.51□□□□□ -0.57
CPSF4-210ENST00000469897 POLR3GO15318 223 aaPredicted RBP11.51□□□□□ -0.57
CPSF4-210ENST00000469897 TPST2O60704 377 aa11.51□□□□□ -0.57
CPSF4-210ENST00000469897 HPRP00739 348 aa11.51□□□□□ -0.57
CPSF4-210ENST00000469897 ARAFP10398 606 aa11.51□□□□□ -0.57
CPSF4-210ENST00000469897 APEHP13798 732 aaKnown RBP11.51□□□□□ -0.57
CPSF4-210ENST00000469897 NQO1P15559 274 aaKnown RBP11.51□□□□□ -0.57
CPSF4-210ENST00000469897 AQP1P29972 269 aa11.51□□□□□ -0.57
CPSF4-210ENST00000469897 ARR3P36575 388 aa11.51□□□□□ -0.57
CPSF4-210ENST00000469897 CAPZA2P47755 286 aa11.51□□□□□ -0.57
CPSF4-210ENST00000469897 MRPL19P49406 292 aaKnown RBP11.51□□□□□ -0.57
CPSF4-210ENST00000469897 IDH3GP51553 393 aaPredicted RBP11.51□□□□□ -0.57
CPSF4-210ENST00000469897 OR1Q1Q15612 314 aa11.51□□□□□ -0.57
CPSF4-210ENST00000469897 EFNB3Q15768 340 aa11.51□□□□□ -0.57
CPSF4-210ENST00000469897 IL17RELQ6ZVW7 336 aa11.51□□□□□ -0.57
CPSF4-210ENST00000469897 MDP1Q86V88 176 aa11.51□□□□□ -0.57
CPSF4-210ENST00000469897 KRT73Q86Y46 540 aa11.51□□□□□ -0.57
CPSF4-210ENST00000469897 UEVLDQ8IX04 471 aa11.51□□□□□ -0.57
CPSF4-210ENST00000469897 TMEM123Q8N131 208 aa11.51□□□□□ -0.57
CPSF4-210ENST00000469897 SLC47A1Q96FL8 570 aa11.51□□□□□ -0.57
CPSF4-210ENST00000469897 C7orf26Q96N11 449 aa11.51□□□□□ -0.57
CPSF4-210ENST00000469897 SPATA5L1Q9BVQ7 753 aa11.51□□□□□ -0.57
CPSF4-210ENST00000469897 RAB1BQ9H0U4 201 aa11.51□□□□□ -0.57
CPSF4-210ENST00000469897 CHODLQ9H9P2 273 aa11.51□□□□□ -0.57
CPSF4-210ENST00000469897 TMEM27Q9HBJ8 222 aa11.51□□□□□ -0.57
CPSF4-210ENST00000469897 KLHL14Q9P2G3 628 aa11.51□□□□□ -0.57
CPSF4-210ENST00000469897 LPAR3Q9UBY5 353 aa11.51□□□□□ -0.57
CPSF4-210ENST00000469897 CADP27708 2225 aa11.5□□□□□ -0.57
CPSF4-210ENST00000469897 A0A087WUJ7 227 aa11.5□□□□□ -0.57
CPSF4-210ENST00000469897 TMEM129A0AVI4 362 aa11.5□□□□□ -0.57
CPSF4-210ENST00000469897 LRRN3E7EW58 273 aa11.5□□□□□ -0.57
CPSF4-210ENST00000469897 hCG_2039718K7EN88 272 aa11.5□□□□□ -0.57
CPSF4-210ENST00000469897 FZD7O75084 574 aa11.5□□□□□ -0.57
CPSF4-210ENST00000469897 ERLIN1O75477 346 aa11.5□□□□□ -0.57
CPSF4-210ENST00000469897 PDE5AO76074 875 aa11.5□□□□□ -0.57
CPSF4-210ENST00000469897 TGDSO95455 350 aa11.5□□□□□ -0.57
CPSF4-210ENST00000469897 TGFAP01135 160 aa11.5□□□□□ -0.57
CPSF4-210ENST00000469897 NPR2P20594 1047 aa11.5□□□□□ -0.57
CPSF4-210ENST00000469897 SLC6A2P23975 617 aa11.5□□□□□ -0.57
CPSF4-210ENST00000469897 AQP5P55064 265 aa11.5□□□□□ -0.57
CPSF4-210ENST00000469897 CDH12P55289 794 aa11.5□□□□□ -0.57
CPSF4-210ENST00000469897 PIGFQ07326 219 aa11.5□□□□□ -0.57
CPSF4-210ENST00000469897 NPRL3Q12980 569 aa11.5□□□□□ -0.57
CPSF4-210ENST00000469897 SCARB2Q14108 478 aa11.5□□□□□ -0.57
CPSF4-210ENST00000469897 ADRM1Q16186 407 aa11.5□□□□□ -0.57
CPSF4-210ENST00000469897 AGKQ53H12 422 aa11.5□□□□□ -0.57
CPSF4-210ENST00000469897 FAM166AQ6J272 317 aa11.5□□□□□ -0.57
CPSF4-210ENST00000469897 C5orf46Q6UWT4 87 aa11.5□□□□□ -0.57
CPSF4-210ENST00000469897 NHLRC1Q6VVB1 395 aa11.5□□□□□ -0.57
CPSF4-210ENST00000469897 SPATA21Q7Z572 469 aa11.5□□□□□ -0.57
CPSF4-210ENST00000469897 WDFY1Q8IWB7 410 aa11.5□□□□□ -0.57
CPSF4-210ENST00000469897 C20orf196Q8IYI0 205 aa11.5□□□□□ -0.57
CPSF4-210ENST00000469897 SVOPLQ8N434 492 aa11.5□□□□□ -0.57
CPSF4-210ENST00000469897 C10orf53Q8N6V4 93 aa11.5□□□□□ -0.57
CPSF4-210ENST00000469897 NUP37Q8NFH4 326 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms