RNA–Protein interactions for RNA: ENST00000469778.1

SPTLC1-204, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 490 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-204ENST00000469778 DOCK7Q96N67 2140 aa11.21□□□□□ -0.61
SPTLC1-204ENST00000469778 NCOA6Q14686 2063 aaPredicted RBP11.21□□□□□ -0.61
SPTLC1-204ENST00000469778 A0A1W2PRG6 482 aa11.21□□□□□ -0.61
SPTLC1-204ENST00000469778 ZNF726A6NNF4 738 aa11.21□□□□□ -0.61
SPTLC1-204ENST00000469778 BLOC1S5-TXNDC5H3BN57 136 aa11.21□□□□□ -0.61
SPTLC1-204ENST00000469778 KLF4O43474 513 aa11.21□□□□□ -0.61
SPTLC1-204ENST00000469778 PTP4A3O75365 173 aa11.21□□□□□ -0.61
SPTLC1-204ENST00000469778 E2F6O75461 281 aa11.21□□□□□ -0.61
SPTLC1-204ENST00000469778 AHCYP23526 432 aa11.21□□□□□ -0.61
SPTLC1-204ENST00000469778 UQCRC1P31930 480 aa11.21□□□□□ -0.61
SPTLC1-204ENST00000469778 DAP3P51398 398 aaKnown RBP11.21□□□□□ -0.61
SPTLC1-204ENST00000469778 TSPAN31Q12999 210 aa11.21□□□□□ -0.61
SPTLC1-204ENST00000469778 KPNB1Q14974 876 aaKnown RBP11.21□□□□□ -0.61
SPTLC1-204ENST00000469778 SEC23BQ15437 767 aa11.21□□□□□ -0.61
SPTLC1-204ENST00000469778 ATP6AP1Q15904 470 aa11.21□□□□□ -0.61
SPTLC1-204ENST00000469778 ZBED5Q49AG3 693 aa11.21□□□□□ -0.61
SPTLC1-204ENST00000469778 FAM205BPQ63HN1 556 aa11.21□□□□□ -0.61
SPTLC1-204ENST00000469778 TBPL2Q6SJ96 375 aa11.21□□□□□ -0.61
SPTLC1-204ENST00000469778 CD300LDQ6UXZ3 194 aa11.21□□□□□ -0.61
SPTLC1-204ENST00000469778 NHLRC1Q6VVB1 395 aa11.21□□□□□ -0.61
SPTLC1-204ENST00000469778 AAED1Q7RTV5 226 aa11.21□□□□□ -0.61
SPTLC1-204ENST00000469778 ZER1Q7Z7L7 766 aa11.21□□□□□ -0.61
SPTLC1-204ENST00000469778 EPHX4Q8IUS5 362 aa11.21□□□□□ -0.61
SPTLC1-204ENST00000469778 LIX1LQ8IVB5 337 aa11.21□□□□□ -0.61
SPTLC1-204ENST00000469778 LRRC17Q8N6Y2 441 aa11.21□□□□□ -0.61
SPTLC1-204ENST00000469778 ZIC4Q8N9L1 334 aa11.21□□□□□ -0.61
SPTLC1-204ENST00000469778 FNDC8Q8TC99 324 aa11.21□□□□□ -0.61
SPTLC1-204ENST00000469778 RNASE6Q93091 150 aaKnown RBP11.21□□□□□ -0.61
SPTLC1-204ENST00000469778 LRR1Q96L50 414 aa11.21□□□□□ -0.61
SPTLC1-204ENST00000469778 LINC00470Q9BZP3 86 aa11.21□□□□□ -0.61
SPTLC1-204ENST00000469778 OR10A4Q9H209 315 aa11.21□□□□□ -0.61
SPTLC1-204ENST00000469778 DENND2DQ9H6A0 471 aaPredicted RBP11.21□□□□□ -0.61
SPTLC1-204ENST00000469778 B3GAT1Q9P2W7 334 aa11.21□□□□□ -0.61
SPTLC1-204ENST00000469778 DOPEY1Q5JWR5 2465 aa11.21□□□□□ -0.61
SPTLC1-204ENST00000469778 PCNX1Q96RV3 2341 aa11.2□□□□□ -0.62
SPTLC1-204ENST00000469778 UNC119BA6NIH7 251 aa11.2□□□□□ -0.62
SPTLC1-204ENST00000469778 RNF13O43567 381 aa11.2□□□□□ -0.62
SPTLC1-204ENST00000469778 AHCYL1O43865 530 aa11.2□□□□□ -0.62
SPTLC1-204ENST00000469778 SMNDC1O75940 238 aaKnown RBP eCLIP11.2□□□□□ -0.62
SPTLC1-204ENST00000469778 NR2C1P13056 603 aa11.2□□□□□ -0.62
SPTLC1-204ENST00000469778 APEHP13798 732 aaKnown RBP11.2□□□□□ -0.62
SPTLC1-204ENST00000469778 ANXA8P13928 327 aa11.2□□□□□ -0.62
SPTLC1-204ENST00000469778 MAKP20794 623 aa11.2□□□□□ -0.62
SPTLC1-204ENST00000469778 PAX7P23759 505 aa11.2□□□□□ -0.62
SPTLC1-204ENST00000469778 GSSP48637 474 aa11.2□□□□□ -0.62
SPTLC1-204ENST00000469778 SIRPAP78324 504 aa11.2□□□□□ -0.62
SPTLC1-204ENST00000469778 SORDQ00796 357 aa11.2□□□□□ -0.62
SPTLC1-204ENST00000469778 IL1RL1Q01638 556 aa11.2□□□□□ -0.62
SPTLC1-204ENST00000469778 RPL18Q07020 188 aaKnown RBP11.2□□□□□ -0.62
SPTLC1-204ENST00000469778 FOXD4Q12950 439 aaPredicted RBP11.2□□□□□ -0.62
SPTLC1-204ENST00000469778 STK11Q15831 433 aa11.2□□□□□ -0.62
SPTLC1-204ENST00000469778 EXOC3L2Q2M3D2 409 aa11.2□□□□□ -0.62
SPTLC1-204ENST00000469778 ALG10Q5BKT4 473 aa11.2□□□□□ -0.62
SPTLC1-204ENST00000469778 FBXW9Q5XUX1 488 aa11.2□□□□□ -0.62
SPTLC1-204ENST00000469778 ZNF770Q6IQ21 691 aaPredicted RBP11.2□□□□□ -0.62
SPTLC1-204ENST00000469778 VWA1Q6PCB0 445 aa11.2□□□□□ -0.62
SPTLC1-204ENST00000469778 SHQ1Q6PI26 577 aaKnown RBP11.2□□□□□ -0.62
SPTLC1-204ENST00000469778 PLXDC2Q6UX71 529 aa11.2□□□□□ -0.62
SPTLC1-204ENST00000469778 Q6ZT83 130 aa11.2□□□□□ -0.62
SPTLC1-204ENST00000469778 HIPK1Q86Z02 1210 aa11.2□□□□□ -0.62
SPTLC1-204ENST00000469778 SVOPLQ8N434 492 aa11.2□□□□□ -0.62
SPTLC1-204ENST00000469778 CLDN22Q8N7P3 220 aa11.2□□□□□ -0.62
SPTLC1-204ENST00000469778 RELL2Q8NC24 303 aaPredicted RBP11.2□□□□□ -0.62
SPTLC1-204ENST00000469778 OR6X1Q8NH79 312 aa11.2□□□□□ -0.62
SPTLC1-204ENST00000469778 GIPC3Q8TF64 312 aa11.2□□□□□ -0.62
SPTLC1-204ENST00000469778 CENPNQ96H22 339 aaPredicted RBP11.2□□□□□ -0.62
SPTLC1-204ENST00000469778 DGCR6LQ9BY27 220 aa11.2□□□□□ -0.62
SPTLC1-204ENST00000469778 ZNF556Q9HAH1 456 aa11.2□□□□□ -0.62
SPTLC1-204ENST00000469778 INIPQ9NRY2 104 aa11.2□□□□□ -0.62
SPTLC1-204ENST00000469778 CLEC4AQ9UMR7 237 aa11.2□□□□□ -0.62
SPTLC1-204ENST00000469778 GPR52Q9Y2T5 361 aa11.2□□□□□ -0.62
SPTLC1-204ENST00000469778 MED12LQ86YW9 2145 aa11.2□□□□□ -0.62
SPTLC1-204ENST00000469778 EEF1E1-BLOC1S5C9J1V9 151 aa11.19□□□□□ -0.62
SPTLC1-204ENST00000469778 LRRN3E7EW58 273 aa11.19□□□□□ -0.62
SPTLC1-204ENST00000469778 EEF1E1O43324 174 aaKnown RBP11.19□□□□□ -0.62
SPTLC1-204ENST00000469778 TRAF3IP2O43734 574 aaPredicted RBP11.19□□□□□ -0.62
SPTLC1-204ENST00000469778 IDH3BO43837 385 aa11.19□□□□□ -0.62
SPTLC1-204ENST00000469778 RAMP1O60894 148 aa11.19□□□□□ -0.62
SPTLC1-204ENST00000469778 ZNF432O94892 652 aa11.19□□□□□ -0.62
SPTLC1-204ENST00000469778 NDUFB2O95178 105 aa11.19□□□□□ -0.62
SPTLC1-204ENST00000469778 BCL10O95999 233 aa11.19□□□□□ -0.62
SPTLC1-204ENST00000469778 ADAP00813 363 aa11.19□□□□□ -0.62
SPTLC1-204ENST00000469778 PPP3CBP16298 524 aa11.19□□□□□ -0.62
SPTLC1-204ENST00000469778 KLK2P20151 261 aa11.19□□□□□ -0.62
SPTLC1-204ENST00000469778 CBLP22681 906 aa11.19□□□□□ -0.62
SPTLC1-204ENST00000469778 AQP2P41181 271 aa11.19□□□□□ -0.62
SPTLC1-204ENST00000469778 CLDN17P56750 224 aa11.19□□□□□ -0.62
SPTLC1-204ENST00000469778 POU3F1Q03052 451 aaPredicted RBP11.19□□□□□ -0.62
SPTLC1-204ENST00000469778 TGFBR3Q03167 851 aa11.19□□□□□ -0.62
SPTLC1-204ENST00000469778 GPR139Q6DWJ6 353 aa11.19□□□□□ -0.62
SPTLC1-204ENST00000469778 PGBD2Q6P3X8 592 aa11.19□□□□□ -0.62
SPTLC1-204ENST00000469778 SMARCD3Q6STE5 483 aa11.19□□□□□ -0.62
SPTLC1-204ENST00000469778 CASP12Q6UXS9 341 aa11.19□□□□□ -0.62
SPTLC1-204ENST00000469778 TFAP2EQ6VUC0 442 aa11.19□□□□□ -0.62
SPTLC1-204ENST00000469778 DPY19L2P2Q6ZN68 376 aa11.19□□□□□ -0.62
SPTLC1-204ENST00000469778 NCCRP1Q6ZVX7 275 aaPredicted RBP11.19□□□□□ -0.62
SPTLC1-204ENST00000469778 SLC35D2Q76EJ3 337 aa11.19□□□□□ -0.62
SPTLC1-204ENST00000469778 NUFIP2Q7Z417 695 aaKnown RBP11.19□□□□□ -0.62
SPTLC1-204ENST00000469778 ZDHHC13Q8IUH4 622 aa11.19□□□□□ -0.62
SPTLC1-204ENST00000469778 ZNF610Q8N9Z0 462 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms