RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 FJX1Q86VR8 437 aa5.6□□□□□ -1.51
PTCD3-208ENST00000469585 MCEMP1Q8IX19 187 aa5.6□□□□□ -1.51
PTCD3-208ENST00000469585 RIMKLAQ8IXN7 391 aa5.6□□□□□ -1.51
PTCD3-208ENST00000469585 CADM3Q8N126 398 aa5.6□□□□□ -1.51
PTCD3-208ENST00000469585 TMEM251Q8N6I4 163 aa5.6□□□□□ -1.51
PTCD3-208ENST00000469585 ZNF441Q8N8Z8 693 aa5.6□□□□□ -1.51
PTCD3-208ENST00000469585 ZNF563Q8TA94 476 aa5.6□□□□□ -1.51
PTCD3-208ENST00000469585 PSMA8Q8TAA3 256 aa5.6□□□□□ -1.51
PTCD3-208ENST00000469585 NEIL3Q8TAT5 605 aa5.6□□□□□ -1.51
PTCD3-208ENST00000469585 FAM57AQ8TBR7 257 aa5.6□□□□□ -1.51
PTCD3-208ENST00000469585 SLC26A7Q8TE54 656 aa5.6□□□□□ -1.51
PTCD3-208ENST00000469585 ASB5Q8WWX0 329 aa5.6□□□□□ -1.51
PTCD3-208ENST00000469585 RND1Q92730 232 aa5.6□□□□□ -1.51
PTCD3-208ENST00000469585 CDS1Q92903 461 aa5.6□□□□□ -1.51
PTCD3-208ENST00000469585 ABTB1Q969K4 478 aaPredicted RBP5.6□□□□□ -1.51
PTCD3-208ENST00000469585 SPDL1Q96EA4 605 aa5.6□□□□□ -1.51
PTCD3-208ENST00000469585 THOC1Q96FV9 657 aaKnown RBP5.6□□□□□ -1.51
PTCD3-208ENST00000469585 MARK4Q96L34 752 aa5.6□□□□□ -1.51
PTCD3-208ENST00000469585 CCDC115Q96NT0 180 aa5.6□□□□□ -1.51
PTCD3-208ENST00000469585 OR7D2Q96RA2 312 aa5.6□□□□□ -1.51
PTCD3-208ENST00000469585 ZNF607Q96SK3 696 aa5.6□□□□□ -1.51
PTCD3-208ENST00000469585 PRRG4Q9BZD6 226 aa5.6□□□□□ -1.51
PTCD3-208ENST00000469585 FAM107BQ9H098 131 aa5.6□□□□□ -1.51
PTCD3-208ENST00000469585 ACKR4Q9NPB9 350 aa5.6□□□□□ -1.51
PTCD3-208ENST00000469585 SLCO1B3Q9NPD5 702 aa5.6□□□□□ -1.51
PTCD3-208ENST00000469585 SDR39U1Q9NRG7 319 aaPredicted RBP5.6□□□□□ -1.51
PTCD3-208ENST00000469585 C20orf141Q9NUB4 165 aa5.6□□□□□ -1.51
PTCD3-208ENST00000469585 FGFR1OP2Q9NVK5 253 aa5.6□□□□□ -1.51
PTCD3-208ENST00000469585 PAQR5Q9NXK6 330 aaPredicted RBP5.6□□□□□ -1.51
PTCD3-208ENST00000469585 ERRFI1Q9UJM3 462 aaPredicted RBP5.6□□□□□ -1.51
PTCD3-208ENST00000469585 SLC35A3Q9Y2D2 325 aa5.6□□□□□ -1.51
PTCD3-208ENST00000469585 AP3M1Q9Y2T2 418 aa5.6□□□□□ -1.51
PTCD3-208ENST00000469585 C15orf41Q9Y2V0 281 aa5.6□□□□□ -1.51
PTCD3-208ENST00000469585 NDUFAF1Q9Y375 327 aa5.6□□□□□ -1.51
PTCD3-208ENST00000469585 WDR45Q9Y484 360 aa5.6□□□□□ -1.51
PTCD3-208ENST00000469585 WDFY3Q8IZQ1 3526 aa5.6□□□□□ -1.51
PTCD3-208ENST00000469585 ITPR1Q14643 2758 aa5.59□□□□□ -1.51
PTCD3-208ENST00000469585 TEX13CA0A0J9YWL9 993 aa5.59□□□□□ -1.51
PTCD3-208ENST00000469585 A0A1W2PPH5 198 aa5.59□□□□□ -1.51
PTCD3-208ENST00000469585 A0A1W2PQD3 144 aa5.59□□□□□ -1.51
PTCD3-208ENST00000469585 PRORSD1PA6NEY8 169 aa5.59□□□□□ -1.51
PTCD3-208ENST00000469585 HSPB2A8KAH6 182 aa5.59□□□□□ -1.51
PTCD3-208ENST00000469585 SERPINB7O75635 380 aa5.59□□□□□ -1.51
PTCD3-208ENST00000469585 KCNK2O95069 426 aa5.59□□□□□ -1.51
PTCD3-208ENST00000469585 NKX2-2O95096 273 aa5.59□□□□□ -1.51
PTCD3-208ENST00000469585 SYNGR4O95473 234 aa5.59□□□□□ -1.51
PTCD3-208ENST00000469585 NADKO95544 446 aaPredicted RBP5.59□□□□□ -1.51
PTCD3-208ENST00000469585 STAMBPO95630 424 aa5.59□□□□□ -1.51
PTCD3-208ENST00000469585 ANGPTL1O95841 491 aa5.59□□□□□ -1.51
PTCD3-208ENST00000469585 PLGP00747 810 aaPredicted RBP5.59□□□□□ -1.51
PTCD3-208ENST00000469585 CSTAP01040 98 aa5.59□□□□□ -1.51
PTCD3-208ENST00000469585 IFNA14P01570 189 aa5.59□□□□□ -1.51
PTCD3-208ENST00000469585 HEXAP06865 529 aa5.59□□□□□ -1.51
PTCD3-208ENST00000469585 NGFRP08138 427 aa5.59□□□□□ -1.51
PTCD3-208ENST00000469585 STSP08842 583 aa5.59□□□□□ -1.51
PTCD3-208ENST00000469585 PABPC4LP0CB38 370 aaKnown RBP5.59□□□□□ -1.51
PTCD3-208ENST00000469585 UBL4AP11441 157 aa5.59□□□□□ -1.51
PTCD3-208ENST00000469585 PGCP20142 388 aa5.59□□□□□ -1.51
PTCD3-208ENST00000469585 TBXA2RP21731 343 aa5.59□□□□□ -1.51
PTCD3-208ENST00000469585 FKBP2P26885 142 aaKnown RBP5.59□□□□□ -1.51
PTCD3-208ENST00000469585 ARRB2P32121 409 aa5.59□□□□□ -1.51
PTCD3-208ENST00000469585 IFNA8P32881 189 aa5.59□□□□□ -1.51
PTCD3-208ENST00000469585 DCTP40126 519 aa5.59□□□□□ -1.51
PTCD3-208ENST00000469585 PEX19P40855 299 aa5.59□□□□□ -1.51
PTCD3-208ENST00000469585 CA7P43166 264 aa5.59□□□□□ -1.51
PTCD3-208ENST00000469585 SLC6A8P48029 635 aa5.59□□□□□ -1.51
PTCD3-208ENST00000469585 ATP12AP54707 1039 aa5.59□□□□□ -1.51
PTCD3-208ENST00000469585 SELENOVP59797 346 aa5.59□□□□□ -1.51
PTCD3-208ENST00000469585 DSTNP60981 165 aa5.59□□□□□ -1.51
PTCD3-208ENST00000469585 ART3Q13508 389 aa5.59□□□□□ -1.51
PTCD3-208ENST00000469585 FGFBP1Q14512 234 aa5.59□□□□□ -1.51
PTCD3-208ENST00000469585 TWIST1Q15672 202 aa5.59□□□□□ -1.51
PTCD3-208ENST00000469585 HSPB2Q16082 182 aa5.59□□□□□ -1.51
PTCD3-208ENST00000469585 DUSP5Q16690 384 aa5.59□□□□□ -1.51
PTCD3-208ENST00000469585 TSTQ16762 297 aaKnown RBP5.59□□□□□ -1.51
PTCD3-208ENST00000469585 CYP51A1Q16850 503 aa5.59□□□□□ -1.51
PTCD3-208ENST00000469585 HYAL4Q2M3T9 481 aa5.59□□□□□ -1.51
PTCD3-208ENST00000469585 ARHGAP11BQ3KRB8 267 aa5.59□□□□□ -1.51
PTCD3-208ENST00000469585 EIPR1Q53HC9 387 aa5.59□□□□□ -1.51
PTCD3-208ENST00000469585 HEPHL1Q6MZM0 1159 aa5.59□□□□□ -1.51
PTCD3-208ENST00000469585 TNFAIP8L2Q6P589 184 aaPredicted RBP5.59□□□□□ -1.51
PTCD3-208ENST00000469585 TRILQ7L0X0 811 aa5.59□□□□□ -1.51
PTCD3-208ENST00000469585 RNF130Q86XS8 419 aa5.59□□□□□ -1.51
PTCD3-208ENST00000469585 SLC30A8Q8IWU4 369 aa5.59□□□□□ -1.51
PTCD3-208ENST00000469585 ZNF440Q8IYI8 595 aa5.59□□□□□ -1.51
PTCD3-208ENST00000469585 CLECL1Q8IZS7 167 aa5.59□□□□□ -1.51
PTCD3-208ENST00000469585 B4GALNT2Q8NHY0 566 aa5.59□□□□□ -1.51
PTCD3-208ENST00000469585 PIK3R3Q92569 461 aa5.59□□□□□ -1.51
PTCD3-208ENST00000469585 SLC25A28Q96A46 364 aa5.59□□□□□ -1.51
PTCD3-208ENST00000469585 ZHX1-C8orf76Q96EF9 292 aa5.59□□□□□ -1.51
PTCD3-208ENST00000469585 NEURL3Q96EH8 262 aa5.59□□□□□ -1.51
PTCD3-208ENST00000469585 TRNT1Q96Q11 434 aaKnown RBP5.59□□□□□ -1.51
PTCD3-208ENST00000469585 TAAR6Q96RI8 345 aa5.59□□□□□ -1.51
PTCD3-208ENST00000469585 THUMPD3Q9BV44 507 aaKnown RBP5.59□□□□□ -1.51
PTCD3-208ENST00000469585 NMUR2Q9GZQ4 415 aa5.59□□□□□ -1.51
PTCD3-208ENST00000469585 OR51I1Q9H343 314 aa5.59□□□□□ -1.51
PTCD3-208ENST00000469585 ZDHHC11Q9H8X9 412 aa5.59□□□□□ -1.51
PTCD3-208ENST00000469585 ANKRA2Q9H9E1 313 aa5.59□□□□□ -1.51
PTCD3-208ENST00000469585 CHST11Q9NPF2 352 aa5.59□□□□□ -1.51
PTCD3-208ENST00000469585 SIRT3Q9NTG7 399 aaPredicted RBP5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms