RNA–Protein interactions for RNA: ENST00000468018.5

ATG4B-215, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 721 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-215ENST00000468018 ASAH2BP0C7U1 165 aa13.29□□□□□ -0.28
ATG4B-215ENST00000468018 DANCRP0C864 163 aa13.29□□□□□ -0.28
ATG4B-215ENST00000468018 HLA-DOBP13765 273 aa13.29□□□□□ -0.28
ATG4B-215ENST00000468018 PTNP21246 168 aa13.29□□□□□ -0.28
ATG4B-215ENST00000468018 CBLP22681 906 aa13.29□□□□□ -0.28
ATG4B-215ENST00000468018 GSK3BP49841 420 aa13.29□□□□□ -0.28
ATG4B-215ENST00000468018 NUDT2P50583 147 aa13.29□□□□□ -0.28
ATG4B-215ENST00000468018 CLDN17P56750 224 aa13.29□□□□□ -0.28
ATG4B-215ENST00000468018 ADAM8P78325 824 aa13.29□□□□□ -0.28
ATG4B-215ENST00000468018 PUDPQ08623 228 aa13.29□□□□□ -0.28
ATG4B-215ENST00000468018 LRRC23Q53EV4 343 aaPredicted RBP13.29□□□□□ -0.28
ATG4B-215ENST00000468018 SLC46A3Q7Z3Q1 461 aa13.29□□□□□ -0.28
ATG4B-215ENST00000468018 ABHD12BQ7Z5M8 362 aaPredicted RBP13.29□□□□□ -0.28
ATG4B-215ENST00000468018 PXKQ7Z7A4 578 aa13.29□□□□□ -0.28
ATG4B-215ENST00000468018 TGIF2LYQ8IUE0 185 aa13.29□□□□□ -0.28
ATG4B-215ENST00000468018 WDFY1Q8IWB7 410 aa13.29□□□□□ -0.28
ATG4B-215ENST00000468018 KBTBD8Q8NFY9 601 aa13.29□□□□□ -0.28
ATG4B-215ENST00000468018 OR5J2Q8NH18 312 aa13.29□□□□□ -0.28
ATG4B-215ENST00000468018 OR52N5Q8NH56 324 aa13.29□□□□□ -0.28
ATG4B-215ENST00000468018 ALKBH3Q96Q83 286 aaPredicted RBP13.29□□□□□ -0.28
ATG4B-215ENST00000468018 FAM107BQ9H098 131 aa13.29□□□□□ -0.28
ATG4B-215ENST00000468018 ALG2Q9H553 416 aa13.29□□□□□ -0.28
ATG4B-215ENST00000468018 FKRPQ9H9S5 495 aa13.29□□□□□ -0.28
ATG4B-215ENST00000468018 ARFGEF3Q5TH69 2177 aa13.28□□□□□ -0.28
ATG4B-215ENST00000468018 A0A1W2PR80 420 aa13.28□□□□□ -0.28
ATG4B-215ENST00000468018 ZNF587BE7ETH6 402 aa13.28□□□□□ -0.28
ATG4B-215ENST00000468018 NDUFAB1O14561 156 aa13.28□□□□□ -0.28
ATG4B-215ENST00000468018 THRBP10828 461 aa13.28□□□□□ -0.28
ATG4B-215ENST00000468018 RBM34P42696 430 aaKnown RBP13.28□□□□□ -0.28
ATG4B-215ENST00000468018 OR1E2P47887 323 aa13.28□□□□□ -0.28
ATG4B-215ENST00000468018 TGFBR3Q03167 851 aa13.28□□□□□ -0.28
ATG4B-215ENST00000468018 ZP4Q12836 540 aa13.28□□□□□ -0.28
ATG4B-215ENST00000468018 FXNQ16595 210 aa13.28□□□□□ -0.28
ATG4B-215ENST00000468018 ZNF672Q499Z4 452 aaPredicted RBP13.28□□□□□ -0.28
ATG4B-215ENST00000468018 C9orf135Q5VTT2 229 aa13.28□□□□□ -0.28
ATG4B-215ENST00000468018 TTC33Q6PID6 262 aaPredicted RBP13.28□□□□□ -0.28
ATG4B-215ENST00000468018 CBLL1Q75N03 491 aa13.28□□□□□ -0.28
ATG4B-215ENST00000468018 CPLX4Q7Z7G2 160 aa13.28□□□□□ -0.28
ATG4B-215ENST00000468018 NKAIN4Q8IVV8 208 aa13.28□□□□□ -0.28
ATG4B-215ENST00000468018 UEVLDQ8IX04 471 aa13.28□□□□□ -0.28
ATG4B-215ENST00000468018 OR1K1Q8NGR3 316 aa13.28□□□□□ -0.28
ATG4B-215ENST00000468018 RNF217Q8TC41 542 aa13.28□□□□□ -0.28
ATG4B-215ENST00000468018 MAGEE2Q8TD90 523 aaPredicted RBP13.28□□□□□ -0.28
ATG4B-215ENST00000468018 LIPHQ8WWY8 451 aa13.28□□□□□ -0.28
ATG4B-215ENST00000468018 NEUROG1Q92886 237 aa13.28□□□□□ -0.28
ATG4B-215ENST00000468018 LRR1Q96L50 414 aa13.28□□□□□ -0.28
ATG4B-215ENST00000468018 OR2M2Q96R28 347 aa13.28□□□□□ -0.28
ATG4B-215ENST00000468018 CCL19Q99731 98 aa13.28□□□□□ -0.28
ATG4B-215ENST00000468018 ASPNQ9BXN1 380 aa13.28□□□□□ -0.28
ATG4B-215ENST00000468018 OBP2BQ9NPH6 170 aa13.28□□□□□ -0.28
ATG4B-215ENST00000468018 DLL4Q9NR61 685 aa13.28□□□□□ -0.28
ATG4B-215ENST00000468018 ZNF229Q9UJW7 825 aa13.28□□□□□ -0.28
ATG4B-215ENST00000468018 A4GNTQ9UNA3 340 aa13.28□□□□□ -0.28
ATG4B-215ENST00000468018 AMDHD2Q9Y303 409 aa13.28□□□□□ -0.28
ATG4B-215ENST00000468018 CXCR6O00574 342 aa13.27□□□□□ -0.29
ATG4B-215ENST00000468018 SLC43A1O75387 559 aa13.27□□□□□ -0.29
ATG4B-215ENST00000468018 TSPAN19P0C672 248 aa13.27□□□□□ -0.29
ATG4B-215ENST00000468018 NQO1P15559 274 aaKnown RBP13.27□□□□□ -0.29
ATG4B-215ENST00000468018 PTAFRP25105 342 aa13.27□□□□□ -0.29
ATG4B-215ENST00000468018 CD40P25942 277 aa13.27□□□□□ -0.29
ATG4B-215ENST00000468018 UGT2B15P54855 530 aa13.27□□□□□ -0.29
ATG4B-215ENST00000468018 PSME3P61289 254 aa13.27□□□□□ -0.29
ATG4B-215ENST00000468018 PIN1Q13526 163 aaPredicted RBP13.27□□□□□ -0.29
ATG4B-215ENST00000468018 PGGHGQ32M88 737 aa13.27□□□□□ -0.29
ATG4B-215ENST00000468018 TBRG1Q3YBR2 411 aa13.27□□□□□ -0.29
ATG4B-215ENST00000468018 ALKBH2Q6NS38 261 aa13.27□□□□□ -0.29
ATG4B-215ENST00000468018 DEF8Q6ZN54 512 aa13.27□□□□□ -0.29
ATG4B-215ENST00000468018 FBXW5Q969U6 566 aa13.27□□□□□ -0.29
ATG4B-215ENST00000468018 PRRC1Q96M27 445 aa13.27□□□□□ -0.29
ATG4B-215ENST00000468018 GSX2Q9BZM3 304 aa13.27□□□□□ -0.29
ATG4B-215ENST00000468018 ZNF701Q9NV72 531 aaPredicted RBP13.27□□□□□ -0.29
ATG4B-215ENST00000468018 TAS2R5Q9NYW4 299 aa13.27□□□□□ -0.29
ATG4B-215ENST00000468018 CRNNQ9UBG3 495 aaPredicted RBP13.27□□□□□ -0.29
ATG4B-215ENST00000468018 RIMS3Q9UJD0 308 aa13.27□□□□□ -0.29
ATG4B-215ENST00000468018 MGAT4BQ9UQ53 548 aa13.27□□□□□ -0.29
ATG4B-215ENST00000468018 NOX1Q9Y5S8 564 aa13.27□□□□□ -0.29
ATG4B-215ENST00000468018 FLNAP21333 2647 aaKnown RBP13.26□□□□□ -0.29
ATG4B-215ENST00000468018 ARPC4-TTLL3A0A0A6YYG9 625 aa13.26□□□□□ -0.29
ATG4B-215ENST00000468018 OVOL3O00110 214 aa13.26□□□□□ -0.29
ATG4B-215ENST00000468018 ABCD4O14678 606 aa13.26□□□□□ -0.29
ATG4B-215ENST00000468018 AKAP8O43823 692 aaKnown RBP13.26□□□□□ -0.29
ATG4B-215ENST00000468018 SHOX2O60902 331 aaPredicted RBP13.26□□□□□ -0.29
ATG4B-215ENST00000468018 CH25HO95992 272 aa13.26□□□□□ -0.29
ATG4B-215ENST00000468018 MT-ND1P03886 318 aa13.26□□□□□ -0.29
ATG4B-215ENST00000468018 SOD3P08294 240 aa13.26□□□□□ -0.29
ATG4B-215ENST00000468018 HOXB1P14653 301 aaPredicted RBP13.26□□□□□ -0.29
ATG4B-215ENST00000468018 FUT4P22083 530 aa13.26□□□□□ -0.29
ATG4B-215ENST00000468018 PAX7P23759 505 aa13.26□□□□□ -0.29
ATG4B-215ENST00000468018 SH3BGRP55822 239 aaPredicted RBP13.26□□□□□ -0.29
ATG4B-215ENST00000468018 TAS2R41P59536 307 aa13.26□□□□□ -0.29
ATG4B-215ENST00000468018 POU3F1Q03052 451 aaPredicted RBP13.26□□□□□ -0.29
ATG4B-215ENST00000468018 PMS2P3Q13401 168 aa13.26□□□□□ -0.29
ATG4B-215ENST00000468018 C1DQ13901 141 aaKnown RBP13.26□□□□□ -0.29
ATG4B-215ENST00000468018 HIKESHIQ53FT3 197 aa13.26□□□□□ -0.29
ATG4B-215ENST00000468018 PHYHD1Q5SRE7 291 aa13.26□□□□□ -0.29
ATG4B-215ENST00000468018 SHEQ5VZ18 495 aa13.26□□□□□ -0.29
ATG4B-215ENST00000468018 PRSS57Q6UWY2 283 aa13.26□□□□□ -0.29
ATG4B-215ENST00000468018 TMEM108Q6UXF1 575 aa13.26□□□□□ -0.29
ATG4B-215ENST00000468018 ZNF627Q7L945 461 aa13.26□□□□□ -0.29
ATG4B-215ENST00000468018 VTCN1Q7Z7D3 282 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms