RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 C10orf111Q8N326 155 aa16.64■□□□□ 0.25
COL9A3-206ENST00000466532 GPR137CQ8N3F9 429 aa16.64■□□□□ 0.25
COL9A3-206ENST00000466532 FAM169BQ8N8A8 192 aa16.64■□□□□ 0.25
COL9A3-206ENST00000466532 ANKK1Q8NFD2 765 aa16.64■□□□□ 0.25
COL9A3-206ENST00000466532 DNAJA4Q8WW22 397 aaPredicted RBP16.64■□□□□ 0.25
COL9A3-206ENST00000466532 SPATA5L1Q9BVQ7 753 aa16.64■□□□□ 0.25
COL9A3-206ENST00000466532 GPR35Q9HC97 309 aa16.64■□□□□ 0.25
COL9A3-206ENST00000466532 CCDC167Q9P0B6 97 aa16.64■□□□□ 0.25
COL9A3-206ENST00000466532 SLAMF8Q9P0V8 285 aa16.64■□□□□ 0.25
COL9A3-206ENST00000466532 LPAR3Q9UBY5 353 aa16.64■□□□□ 0.25
COL9A3-206ENST00000466532 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.64■□□□□ 0.25
COL9A3-206ENST00000466532 IGKV1D-42A0A075B6H8 117 aa16.63■□□□□ 0.25
COL9A3-206ENST00000466532 TRAV36DV7A0A075B6V5 113 aa16.63■□□□□ 0.25
COL9A3-206ENST00000466532 AKAP8O43823 692 aaKnown RBP16.63■□□□□ 0.25
COL9A3-206ENST00000466532 ERLIN1O75477 346 aa16.63■□□□□ 0.25
COL9A3-206ENST00000466532 CELA3BP08861 270 aa16.63■□□□□ 0.25
COL9A3-206ENST00000466532 CBR1P16152 277 aa16.63■□□□□ 0.25
COL9A3-206ENST00000466532 PPIBP23284 216 aaKnown RBP16.63■□□□□ 0.25
COL9A3-206ENST00000466532 NR4A2P43354 598 aa16.63■□□□□ 0.25
COL9A3-206ENST00000466532 GZMKP49863 264 aa16.63■□□□□ 0.25
COL9A3-206ENST00000466532 IDH3GP51553 393 aaPredicted RBP16.63■□□□□ 0.25
COL9A3-206ENST00000466532 CDK6Q00534 326 aa16.63■□□□□ 0.25
COL9A3-206ENST00000466532 EFNB3Q15768 340 aa16.63■□□□□ 0.25
COL9A3-206ENST00000466532 CEACAM16Q2WEN9 425 aa16.63■□□□□ 0.25
COL9A3-206ENST00000466532 GLIPR1L2Q4G1C9 344 aa16.63■□□□□ 0.25
COL9A3-206ENST00000466532 DHRS4L2Q6PKH6 230 aa16.63■□□□□ 0.25
COL9A3-206ENST00000466532 BLOC1S3Q6QNY0 202 aa16.63■□□□□ 0.25
COL9A3-206ENST00000466532 H1FNTQ75WM6 255 aaPredicted RBP16.63■□□□□ 0.25
COL9A3-206ENST00000466532 NET1Q7Z628 596 aaPredicted RBP16.63■□□□□ 0.25
COL9A3-206ENST00000466532 MYPOPQ86VE0 399 aaPredicted RBP16.63■□□□□ 0.25
COL9A3-206ENST00000466532 COMTD1Q86VU5 262 aa16.63■□□□□ 0.25
COL9A3-206ENST00000466532 PIK3C3Q8NEB9 887 aa16.63■□□□□ 0.25
COL9A3-206ENST00000466532 OR4F15Q8NGB8 312 aa16.63■□□□□ 0.25
COL9A3-206ENST00000466532 TMEM158Q8WZ71 300 aa16.63■□□□□ 0.25
COL9A3-206ENST00000466532 SPDL1Q96EA4 605 aa16.63■□□□□ 0.25
COL9A3-206ENST00000466532 C7orf26Q96N11 449 aa16.63■□□□□ 0.25
COL9A3-206ENST00000466532 EBF4Q9BQW3 602 aa16.63■□□□□ 0.25
COL9A3-206ENST00000466532 PRR14Q9BWN1 585 aa16.63■□□□□ 0.25
COL9A3-206ENST00000466532 SHARPINQ9H0F6 387 aa16.63■□□□□ 0.25
COL9A3-206ENST00000466532 CRLF2Q9HC73 371 aa16.63■□□□□ 0.25
COL9A3-206ENST00000466532 MYOZ1Q9NP98 299 aaPredicted RBP16.63■□□□□ 0.25
COL9A3-206ENST00000466532 LOC390937A0A1W2PQ73 354 aa16.62■□□□□ 0.25
COL9A3-206ENST00000466532 TPST1O60507 370 aa16.62■□□□□ 0.25
COL9A3-206ENST00000466532 LMX1BO60663 402 aa16.62■□□□□ 0.25
COL9A3-206ENST00000466532 TGDSO95455 350 aa16.62■□□□□ 0.25
COL9A3-206ENST00000466532 IDH3AP50213 366 aa16.62■□□□□ 0.25
COL9A3-206ENST00000466532 PPOXP50336 477 aa16.62■□□□□ 0.25
COL9A3-206ENST00000466532 NCALDP61601 193 aa16.62■□□□□ 0.25
COL9A3-206ENST00000466532 HGFACQ04756 655 aa16.62■□□□□ 0.25
COL9A3-206ENST00000466532 PAGE3Q5JUK9 113 aa16.62■□□□□ 0.25
COL9A3-206ENST00000466532 BEND6Q5SZJ8 279 aaPredicted RBP16.62■□□□□ 0.25
COL9A3-206ENST00000466532 FAM91A1Q658Y4 838 aa16.62■□□□□ 0.25
COL9A3-206ENST00000466532 ULK3Q6PHR2 472 aa16.62■□□□□ 0.25
COL9A3-206ENST00000466532 NUP37Q8NFH4 326 aa16.62■□□□□ 0.25
COL9A3-206ENST00000466532 RNF217Q8TC41 542 aa16.62■□□□□ 0.25
COL9A3-206ENST00000466532 ZNF837Q96EG3 531 aaPredicted RBP16.62■□□□□ 0.25
COL9A3-206ENST00000466532 FOXN4Q96NZ1 517 aa16.62■□□□□ 0.25
COL9A3-206ENST00000466532 OR2M2Q96R28 347 aa16.62■□□□□ 0.25
COL9A3-206ENST00000466532 PLK3Q9H4B4 646 aa16.62■□□□□ 0.25
COL9A3-206ENST00000466532 SELENONQ9NZV5 590 aa16.62■□□□□ 0.25
COL9A3-206ENST00000466532 VAPAQ9P0L0 249 aa16.62■□□□□ 0.25
COL9A3-206ENST00000466532 KLHL14Q9P2G3 628 aa16.62■□□□□ 0.25
COL9A3-206ENST00000466532 TESQ9UGI8 421 aaKnown RBP16.62■□□□□ 0.25
COL9A3-206ENST00000466532 ZNF503-AS2A6NEH8 195 aa16.61■□□□□ 0.25
COL9A3-206ENST00000466532 PHF1O43189 567 aaPredicted RBP16.61■□□□□ 0.25
COL9A3-206ENST00000466532 TRAF3IP2O43734 574 aaPredicted RBP16.61■□□□□ 0.25
COL9A3-206ENST00000466532 SEC14L2O76054 403 aa16.61■□□□□ 0.25
COL9A3-206ENST00000466532 NQO1P15559 274 aaKnown RBP16.61■□□□□ 0.25
COL9A3-206ENST00000466532 ARR3P36575 388 aa16.61■□□□□ 0.25
COL9A3-206ENST00000466532 CAPZA2P47755 286 aa16.61■□□□□ 0.25
COL9A3-206ENST00000466532 RGS8P57771 180 aaPredicted RBP16.61■□□□□ 0.25
COL9A3-206ENST00000466532 NPRL3Q12980 569 aa16.61■□□□□ 0.25
COL9A3-206ENST00000466532 SCARB2Q14108 478 aa16.61■□□□□ 0.25
COL9A3-206ENST00000466532 IQCCQ4KMZ1 466 aa16.61■□□□□ 0.25
COL9A3-206ENST00000466532 UEVLDQ8IX04 471 aa16.61■□□□□ 0.25
COL9A3-206ENST00000466532 TMEM123Q8N131 208 aa16.61■□□□□ 0.25
COL9A3-206ENST00000466532 ARIH2OSQ8N7S6 290 aa16.61■□□□□ 0.25
COL9A3-206ENST00000466532 ADPRHL1Q8NDY3 354 aa16.61■□□□□ 0.25
COL9A3-206ENST00000466532 LRRC8CQ8TDW0 803 aa16.61■□□□□ 0.25
COL9A3-206ENST00000466532 SLC47A1Q96FL8 570 aa16.61■□□□□ 0.25
COL9A3-206ENST00000466532 RAB1BQ9H0U4 201 aa16.61■□□□□ 0.25
COL9A3-206ENST00000466532 ZNF442Q9H7R0 627 aa16.61■□□□□ 0.25
COL9A3-206ENST00000466532 SLCO1B3Q9NPD5 702 aa16.61■□□□□ 0.25
COL9A3-206ENST00000466532 TRBV5-3A0A0A0MS03 114 aa16.6■□□□□ 0.25
COL9A3-206ENST00000466532 IGHV4-61A0A0C4DH41 118 aa16.6■□□□□ 0.25
COL9A3-206ENST00000466532 LOC102725191A0A1B0GVB3 256 aa16.6■□□□□ 0.25
COL9A3-206ENST00000466532 VSTM5A8MXK1 200 aa16.6■□□□□ 0.25
COL9A3-206ENST00000466532 ZNF99A8MXY4 864 aaPredicted RBP16.6■□□□□ 0.25
COL9A3-206ENST00000466532 MS4A18H0YCH9 400 aa16.6■□□□□ 0.25
COL9A3-206ENST00000466532 M0R3G1 203 aa16.6■□□□□ 0.25
COL9A3-206ENST00000466532 APEHP13798 732 aaKnown RBP16.6■□□□□ 0.25
COL9A3-206ENST00000466532 NPR2P20594 1047 aa16.6■□□□□ 0.25
COL9A3-206ENST00000466532 THBS4P35443 961 aa16.6■□□□□ 0.25
COL9A3-206ENST00000466532 MFSD13AQ14CX5 517 aa16.6■□□□□ 0.25
COL9A3-206ENST00000466532 MS4A18Q3C1V0 323 aa16.6■□□□□ 0.25
COL9A3-206ENST00000466532 PHYHD1Q5SRE7 291 aa16.6■□□□□ 0.25
COL9A3-206ENST00000466532 AGBL2Q5U5Z8 902 aa16.6■□□□□ 0.25
COL9A3-206ENST00000466532 CARD17Q5XLA6 110 aa16.6■□□□□ 0.25
COL9A3-206ENST00000466532 FAM166AQ6J272 317 aa16.6■□□□□ 0.25
COL9A3-206ENST00000466532 MDP1Q86V88 176 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms