RNA–Protein interactions for RNA: ENST00000465514.1

USP39-212, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-212ENST00000465514 VHLLQ6RSH7 139 aa8.41□□□□□ -1.06
USP39-212ENST00000465514 EPHX4Q8IUS5 362 aa8.41□□□□□ -1.06
USP39-212ENST00000465514 KDM8Q8N371 416 aa8.41□□□□□ -1.06
USP39-212ENST00000465514 CLIP4Q8N3C7 705 aa8.41□□□□□ -1.06
USP39-212ENST00000465514 SLC38A5Q8WUX1 472 aa8.41□□□□□ -1.06
USP39-212ENST00000465514 ZBTB9Q96C00 473 aa8.41□□□□□ -1.06
USP39-212ENST00000465514 SLC25A36Q96CQ1 311 aa8.41□□□□□ -1.06
USP39-212ENST00000465514 ALKBH3Q96Q83 286 aaPredicted RBP8.41□□□□□ -1.06
USP39-212ENST00000465514 PAIP2Q9BPZ3 127 aaKnown RBP8.41□□□□□ -1.06
USP39-212ENST00000465514 SUCNR1Q9BXA5 334 aa8.41□□□□□ -1.06
USP39-212ENST00000465514 CENPHQ9H3R5 247 aa8.41□□□□□ -1.06
USP39-212ENST00000465514 WDR55Q9H6Y2 383 aaPredicted RBP8.41□□□□□ -1.06
USP39-212ENST00000465514 SEC61A2Q9H9S3 476 aa8.41□□□□□ -1.06
USP39-212ENST00000465514 LPAR2Q9HBW0 351 aa8.41□□□□□ -1.06
USP39-212ENST00000465514 CALML5Q9NZT1 146 aa8.41□□□□□ -1.06
USP39-212ENST00000465514 CRNNQ9UBG3 495 aaPredicted RBP8.41□□□□□ -1.06
USP39-212ENST00000465514 P2RX2Q9UBL9 471 aa8.41□□□□□ -1.06
USP39-212ENST00000465514 ZNF232Q9UNY5 417 aa8.41□□□□□ -1.06
USP39-212ENST00000465514 RASD1Q9Y272 281 aa8.41□□□□□ -1.06
USP39-212ENST00000465514 ZNF443Q9Y2A4 671 aaPredicted RBP8.41□□□□□ -1.06
USP39-212ENST00000465514 CHST2Q9Y4C5 530 aa8.41□□□□□ -1.06
USP39-212ENST00000465514 OR6C65A6NJZ3 312 aa8.4□□□□□ -1.06
USP39-212ENST00000465514 TMEM229AB2RXF0 380 aa8.4□□□□□ -1.06
USP39-212ENST00000465514 SLC22A3O75751 556 aa8.4□□□□□ -1.06
USP39-212ENST00000465514 PDE5AO76074 875 aa8.4□□□□□ -1.06
USP39-212ENST00000465514 IGLV1-44P01699 117 aa8.4□□□□□ -1.06
USP39-212ENST00000465514 IL6P05231 212 aa8.4□□□□□ -1.06
USP39-212ENST00000465514 BCHEP06276 602 aa8.4□□□□□ -1.06
USP39-212ENST00000465514 CALCRP30988 508 aa8.4□□□□□ -1.06
USP39-212ENST00000465514 CRISP3P54108 245 aa8.4□□□□□ -1.06
USP39-212ENST00000465514 CLDN17P56750 224 aa8.4□□□□□ -1.06
USP39-212ENST00000465514 DSTNP60981 165 aa8.4□□□□□ -1.06
USP39-212ENST00000465514 ARF1P84077 181 aaKnown RBP8.4□□□□□ -1.06
USP39-212ENST00000465514 HOXC5Q00444 222 aa8.4□□□□□ -1.06
USP39-212ENST00000465514 ROR2Q01974 943 aaKnown RBP8.4□□□□□ -1.06
USP39-212ENST00000465514 HGFACQ04756 655 aa8.4□□□□□ -1.06
USP39-212ENST00000465514 EFNB3Q15768 340 aa8.4□□□□□ -1.06
USP39-212ENST00000465514 C3orf36Q3SXR2 165 aa8.4□□□□□ -1.06
USP39-212ENST00000465514 RPS26P11Q5JNZ5 115 aaPredicted RBP8.4□□□□□ -1.06
USP39-212ENST00000465514 RNF220Q5VTB9 566 aa8.4□□□□□ -1.06
USP39-212ENST00000465514 ATG16L1Q676U5 607 aa8.4□□□□□ -1.06
USP39-212ENST00000465514 UGT2A3Q6UWM9 527 aa8.4□□□□□ -1.06
USP39-212ENST00000465514 SERPINA11Q86U17 422 aa8.4□□□□□ -1.06
USP39-212ENST00000465514 MREGQ8N565 214 aa8.4□□□□□ -1.06
USP39-212ENST00000465514 GLB1L3Q8NCI6 653 aaPredicted RBP8.4□□□□□ -1.06
USP39-212ENST00000465514 OR4F15Q8NGB8 312 aa8.4□□□□□ -1.06
USP39-212ENST00000465514 MFSD8Q8NHS3 518 aa8.4□□□□□ -1.06
USP39-212ENST00000465514 MAGEE2Q8TD90 523 aaPredicted RBP8.4□□□□□ -1.06
USP39-212ENST00000465514 STK35Q8TDR2 534 aa8.4□□□□□ -1.06
USP39-212ENST00000465514 TMEM186Q96B77 213 aa8.4□□□□□ -1.06
USP39-212ENST00000465514 ZNF317Q96PQ6 595 aaPredicted RBP8.4□□□□□ -1.06
USP39-212ENST00000465514 SPATA9Q9BWV2 254 aa8.4□□□□□ -1.06
USP39-212ENST00000465514 LINC00470Q9BZP3 86 aa8.4□□□□□ -1.06
USP39-212ENST00000465514 NELFAQ9H3P2 528 aa8.4□□□□□ -1.06
USP39-212ENST00000465514 PLK3Q9H4B4 646 aa8.4□□□□□ -1.06
USP39-212ENST00000465514 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.4□□□□□ -1.06
USP39-212ENST00000465514 GRIP1Q9Y3R0 1128 aa8.4□□□□□ -1.06
USP39-212ENST00000465514 LOC105371242A0A075B767 164 aa8.39□□□□□ -1.07
USP39-212ENST00000465514 A0A096LPI6 279 aa8.39□□□□□ -1.07
USP39-212ENST00000465514 A0A0G2JPF8 293 aa8.39□□□□□ -1.07
USP39-212ENST00000465514 TRPC5OSA6NMA1 111 aa8.39□□□□□ -1.07
USP39-212ENST00000465514 HNRNPCL2B2RXH8 293 aa8.39□□□□□ -1.07
USP39-212ENST00000465514 HNRNPCL3B7ZW38 293 aa8.39□□□□□ -1.07
USP39-212ENST00000465514 FTCDNL1E5RQL4 147 aa8.39□□□□□ -1.07
USP39-212ENST00000465514 HDAC3O15379 428 aa8.39□□□□□ -1.07
USP39-212ENST00000465514 HNRNPCL1O60812 293 aaKnown RBP8.39□□□□□ -1.07
USP39-212ENST00000465514 ZNF432O94892 652 aa8.39□□□□□ -1.07
USP39-212ENST00000465514 AHSA1O95433 338 aa8.39□□□□□ -1.07
USP39-212ENST00000465514 ANP32DO95626 131 aa8.39□□□□□ -1.07
USP39-212ENST00000465514 IGKV3-15P01624 115 aa8.39□□□□□ -1.07
USP39-212ENST00000465514 CELA3BP08861 270 aa8.39□□□□□ -1.07
USP39-212ENST00000465514 ZCCHC18P0CG32 403 aa8.39□□□□□ -1.07
USP39-212ENST00000465514 HNRNPCL4P0DMR1 293 aa8.39□□□□□ -1.07
USP39-212ENST00000465514 KITP10721 976 aa8.39□□□□□ -1.07
USP39-212ENST00000465514 PNMTP11086 282 aa8.39□□□□□ -1.07
USP39-212ENST00000465514 DAOP14920 347 aa8.39□□□□□ -1.07
USP39-212ENST00000465514 CBR1P16152 277 aa8.39□□□□□ -1.07
USP39-212ENST00000465514 THBS4P35443 961 aa8.39□□□□□ -1.07
USP39-212ENST00000465514 RPS5P46782 204 aaKnown RBP8.39□□□□□ -1.07
USP39-212ENST00000465514 PPOXP50336 477 aa8.39□□□□□ -1.07
USP39-212ENST00000465514 IDH3GP51553 393 aaPredicted RBP8.39□□□□□ -1.07
USP39-212ENST00000465514 SH3BGRP55822 239 aaPredicted RBP8.39□□□□□ -1.07
USP39-212ENST00000465514 EGR4Q05215 589 aa8.39□□□□□ -1.07
USP39-212ENST00000465514 GTDC1Q4AE62 458 aa8.39□□□□□ -1.07
USP39-212ENST00000465514 PDCD4Q53EL6 469 aaKnown RBP8.39□□□□□ -1.07
USP39-212ENST00000465514 TNFAIP8L3Q5GJ75 292 aa8.39□□□□□ -1.07
USP39-212ENST00000465514 HHATQ5VTY9 493 aa8.39□□□□□ -1.07
USP39-212ENST00000465514 NXNQ6DKJ4 435 aa8.39□□□□□ -1.07
USP39-212ENST00000465514 C1orf229Q6ZS94 237 aaPredicted RBP8.39□□□□□ -1.07
USP39-212ENST00000465514 MYPOPQ86VE0 399 aaPredicted RBP8.39□□□□□ -1.07
USP39-212ENST00000465514 C1QL4Q86Z23 238 aa8.39□□□□□ -1.07
USP39-212ENST00000465514 FAM169BQ8N8A8 192 aa8.39□□□□□ -1.07
USP39-212ENST00000465514 ANKRD42Q8N9B4 389 aa8.39□□□□□ -1.07
USP39-212ENST00000465514 NUP37Q8NFH4 326 aa8.39□□□□□ -1.07
USP39-212ENST00000465514 KTI12Q96EK9 354 aaPredicted RBP8.39□□□□□ -1.07
USP39-212ENST00000465514 TMEM19Q96HH6 336 aa8.39□□□□□ -1.07
USP39-212ENST00000465514 PTDSS2Q9BVG9 487 aa8.39□□□□□ -1.07
USP39-212ENST00000465514 RAB1BQ9H0U4 201 aa8.39□□□□□ -1.07
USP39-212ENST00000465514 ARMC7Q9H6L4 198 aa8.39□□□□□ -1.07
USP39-212ENST00000465514 TPT1P8Q9HAU6 139 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms