RNA–Protein interactions for RNA: ENST00000464787.1

UBP1-206, Transcript of upstream binding protein 1, humanhuman

TSL 3

Gene UBP1, Length 536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1-206ENST00000464787 DTNBP1Q96EV8 351 aa4.72□□□□□ -1.65
UBP1-206ENST00000464787 NEIL1Q96FI4 390 aaPredicted RBP4.72□□□□□ -1.65
UBP1-206ENST00000464787 MARS2Q96GW9 593 aaKnown RBP4.72□□□□□ -1.65
UBP1-206ENST00000464787 ARL5BQ96KC2 179 aa4.72□□□□□ -1.65
UBP1-206ENST00000464787 KLHL15Q96M94 604 aa4.72□□□□□ -1.65
UBP1-206ENST00000464787 WFDC6Q9BQY6 131 aa4.72□□□□□ -1.65
UBP1-206ENST00000464787 NUDT16L1Q9BRJ7 211 aaKnown RBP4.72□□□□□ -1.65
UBP1-206ENST00000464787 SLC39A3Q9BRY0 314 aa4.72□□□□□ -1.65
UBP1-206ENST00000464787 CCDC106Q9BWC9 280 aa4.72□□□□□ -1.65
UBP1-206ENST00000464787 SFXN3Q9BWM7 321 aa4.72□□□□□ -1.65
UBP1-206ENST00000464787 OR11A1Q9GZK7 315 aa4.72□□□□□ -1.65
UBP1-206ENST00000464787 OPN3Q9H1Y3 402 aaPredicted RBP4.72□□□□□ -1.65
UBP1-206ENST00000464787 CCDC134Q9H6E4 229 aa4.72□□□□□ -1.65
UBP1-206ENST00000464787 MTHFD2LQ9H903 347 aaPredicted RBP4.72□□□□□ -1.65
UBP1-206ENST00000464787 UNKLQ9H9P5 680 aaKnown RBP4.72□□□□□ -1.65
UBP1-206ENST00000464787 RNF122Q9H9V4 155 aa4.72□□□□□ -1.65
UBP1-206ENST00000464787 MSL2Q9HCI7 577 aa4.72□□□□□ -1.65
UBP1-206ENST00000464787 MED4Q9NPJ6 270 aa4.72□□□□□ -1.65
UBP1-206ENST00000464787 CTPS2Q9NRF8 586 aa4.72□□□□□ -1.65
UBP1-206ENST00000464787 POLE3Q9NRF9 147 aa4.72□□□□□ -1.65
UBP1-206ENST00000464787 P2RX2Q9UBL9 471 aa4.72□□□□□ -1.65
UBP1-206ENST00000464787 ING1Q9UK53 422 aaPredicted RBP4.72□□□□□ -1.65
UBP1-206ENST00000464787 BAG5Q9UL15 447 aa4.72□□□□□ -1.65
UBP1-206ENST00000464787 LIPT1Q9Y234 373 aa4.72□□□□□ -1.65
UBP1-206ENST00000464787 ZNF175Q9Y473 711 aa4.72□□□□□ -1.65
UBP1-206ENST00000464787 GMEB1Q9Y692 573 aa4.72□□□□□ -1.65
UBP1-206ENST00000464787 F8P00451 2351 aa4.72□□□□□ -1.65
UBP1-206ENST00000464787 ACANP16112 2415 aa4.71□□□□□ -1.66
UBP1-206ENST00000464787 ZNF814B7Z6K7 855 aa4.71□□□□□ -1.66
UBP1-206ENST00000464787 ATP8B1O43520 1251 aa4.71□□□□□ -1.66
UBP1-206ENST00000464787 TPST1O60507 370 aa4.71□□□□□ -1.66
UBP1-206ENST00000464787 RAMP1O60894 148 aa4.71□□□□□ -1.66
UBP1-206ENST00000464787 GCM2O75603 506 aaPredicted RBP4.71□□□□□ -1.66
UBP1-206ENST00000464787 DBIP07108 87 aaKnown RBP4.71□□□□□ -1.66
UBP1-206ENST00000464787 IL7RP16871 459 aa4.71□□□□□ -1.66
UBP1-206ENST00000464787 GPX2P18283 190 aa4.71□□□□□ -1.66
UBP1-206ENST00000464787 PGCP20142 388 aa4.71□□□□□ -1.66
UBP1-206ENST00000464787 CCNA2P20248 432 aa4.71□□□□□ -1.66
UBP1-206ENST00000464787 ME2P23368 584 aa4.71□□□□□ -1.66
UBP1-206ENST00000464787 EDNRAP25101 427 aa4.71□□□□□ -1.66
UBP1-206ENST00000464787 ELK4P28324 431 aa4.71□□□□□ -1.66
UBP1-206ENST00000464787 RPS19P39019 145 aaKnown RBP4.71□□□□□ -1.66
UBP1-206ENST00000464787 EIF1P41567 113 aaKnown RBP4.71□□□□□ -1.66
UBP1-206ENST00000464787 ACAA2P42765 397 aaKnown RBP4.71□□□□□ -1.66
UBP1-206ENST00000464787 IDH2P48735 452 aaKnown RBP4.71□□□□□ -1.66
UBP1-206ENST00000464787 ASCL1P50553 236 aa4.71□□□□□ -1.66
UBP1-206ENST00000464787 CRISP3P54108 245 aa4.71□□□□□ -1.66
UBP1-206ENST00000464787 CARD18P57730 90 aa4.71□□□□□ -1.66
UBP1-206ENST00000464787 EEFSECP57772 596 aaKnown RBP4.71□□□□□ -1.66
UBP1-206ENST00000464787 MTPNP58546 118 aa4.71□□□□□ -1.66
UBP1-206ENST00000464787 RPS3AP61247 264 aaKnown RBP4.71□□□□□ -1.66
UBP1-206ENST00000464787 TXNL4AP83876 142 aaKnown RBP4.71□□□□□ -1.66
UBP1-206ENST00000464787 HOXC5Q00444 222 aa4.71□□□□□ -1.66
UBP1-206ENST00000464787 TLE4Q04727 773 aa4.71□□□□□ -1.66
UBP1-206ENST00000464787 FAM27E3Q08E93 113 aa4.71□□□□□ -1.66
UBP1-206ENST00000464787 MERTKQ12866 999 aa4.71□□□□□ -1.66
UBP1-206ENST00000464787 EPS8Q12929 822 aa4.71□□□□□ -1.66
UBP1-206ENST00000464787 FADDQ13158 208 aa4.71□□□□□ -1.66
UBP1-206ENST00000464787 ZNF239Q16600 458 aaKnown RBP4.71□□□□□ -1.66
UBP1-206ENST00000464787 GLIPR1L2Q4G1C9 344 aa4.71□□□□□ -1.66
UBP1-206ENST00000464787 HSP90B2PQ58FF3 399 aa4.71□□□□□ -1.66
UBP1-206ENST00000464787 RUNDC3AQ59EK9 446 aa4.71□□□□□ -1.66
UBP1-206ENST00000464787 SFRP4Q6FHJ7 346 aaPredicted RBP4.71□□□□□ -1.66
UBP1-206ENST00000464787 TMEM108Q6UXF1 575 aa4.71□□□□□ -1.66
UBP1-206ENST00000464787 PLEKHM3Q6ZWE6 761 aa4.71□□□□□ -1.66
UBP1-206ENST00000464787 CHMP1BQ7LBR1 199 aa4.71□□□□□ -1.66
UBP1-206ENST00000464787 NUFIP2Q7Z417 695 aaKnown RBP4.71□□□□□ -1.66
UBP1-206ENST00000464787 GDF7Q7Z4P5 450 aa4.71□□□□□ -1.66
UBP1-206ENST00000464787 SERPINA11Q86U17 422 aa4.71□□□□□ -1.66
UBP1-206ENST00000464787 PTOV1Q86YD1 416 aa4.71□□□□□ -1.66
UBP1-206ENST00000464787 SLC15A3Q8IY34 581 aa4.71□□□□□ -1.66
UBP1-206ENST00000464787 DPP10Q8N608 796 aa4.71□□□□□ -1.66
UBP1-206ENST00000464787 ARFGAP2Q8N6H7 521 aa4.71□□□□□ -1.66
UBP1-206ENST00000464787 OR52P1PQ8NH57 321 aa4.71□□□□□ -1.66
UBP1-206ENST00000464787 NFKBIDQ8NI38 313 aa4.71□□□□□ -1.66
UBP1-206ENST00000464787 LINC01560Q8TB33 94 aa4.71□□□□□ -1.66
UBP1-206ENST00000464787 ABHD3Q8WU67 409 aa4.71□□□□□ -1.66
UBP1-206ENST00000464787 C10orf82Q8WW14 230 aa4.71□□□□□ -1.66
UBP1-206ENST00000464787 ST8SIA1Q92185 356 aa4.71□□□□□ -1.66
UBP1-206ENST00000464787 NRGNQ92686 78 aa4.71□□□□□ -1.66
UBP1-206ENST00000464787 RNASE6Q93091 150 aaKnown RBP4.71□□□□□ -1.66
UBP1-206ENST00000464787 ZFP3Q96NJ6 502 aa4.71□□□□□ -1.66
UBP1-206ENST00000464787 LRRC37BQ96QE4 947 aa4.71□□□□□ -1.66
UBP1-206ENST00000464787 CGREF1Q99674 301 aa4.71□□□□□ -1.66
UBP1-206ENST00000464787 SIKE1Q9BRV8 207 aa4.71□□□□□ -1.66
UBP1-206ENST00000464787 PTDSS2Q9BVG9 487 aa4.71□□□□□ -1.66
UBP1-206ENST00000464787 RBM24Q9BX46 236 aaKnown RBP4.71□□□□□ -1.66
UBP1-206ENST00000464787 KRTAP17-1Q9BYP8 105 aa4.71□□□□□ -1.66
UBP1-206ENST00000464787 A4GALTQ9NPC4 353 aa4.71□□□□□ -1.66
UBP1-206ENST00000464787 EXOSC3Q9NQT5 275 aaKnown RBP4.71□□□□□ -1.66
UBP1-206ENST00000464787 SAR1AQ9NR31 198 aa4.71□□□□□ -1.66
UBP1-206ENST00000464787 ACER3Q9NUN7 267 aa4.71□□□□□ -1.66
UBP1-206ENST00000464787 MRPS18AQ9NVS2 196 aaKnown RBP4.71□□□□□ -1.66
UBP1-206ENST00000464787 TMEM45AQ9NWC5 275 aa4.71□□□□□ -1.66
UBP1-206ENST00000464787 ARMCX1Q9P291 453 aa4.71□□□□□ -1.66
UBP1-206ENST00000464787 LEF1Q9UJU2 399 aaPredicted RBP4.71□□□□□ -1.66
UBP1-206ENST00000464787 PACSIN3Q9UKS6 424 aa4.71□□□□□ -1.66
UBP1-206ENST00000464787 OAZ3Q9UMX2 235 aa4.71□□□□□ -1.66
UBP1-206ENST00000464787 ZNF443Q9Y2A4 671 aaPredicted RBP4.71□□□□□ -1.66
UBP1-206ENST00000464787 SLC35A3Q9Y2D2 325 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms