RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 DIRAS1O95057 198 aa12.82□□□□□ -0.36
SQSTM1-205ENST00000464493 FABP3P05413 133 aa12.82□□□□□ -0.36
SQSTM1-205ENST00000464493 IFI30P13284 250 aa12.82□□□□□ -0.36
SQSTM1-205ENST00000464493 HLA-DOBP13765 273 aa12.82□□□□□ -0.36
SQSTM1-205ENST00000464493 PRF1P14222 555 aa12.82□□□□□ -0.36
SQSTM1-205ENST00000464493 IGHV1-2P23083 117 aa12.82□□□□□ -0.36
SQSTM1-205ENST00000464493 SELENOPP49908 381 aa12.82□□□□□ -0.36
SQSTM1-205ENST00000464493 CLDN17P56750 224 aa12.82□□□□□ -0.36
SQSTM1-205ENST00000464493 LSM11P83369 360 aaKnown RBP eCLIP12.82□□□□□ -0.362e-6■■□□□ 13.3
SQSTM1-205ENST00000464493 ZP4Q12836 540 aa12.82□□□□□ -0.36
SQSTM1-205ENST00000464493 DGCR6Q14129 220 aa12.82□□□□□ -0.36
SQSTM1-205ENST00000464493 TSPO2Q5TGU0 170 aa12.82□□□□□ -0.36
SQSTM1-205ENST00000464493 NIPAL3Q6P499 406 aa12.82□□□□□ -0.36
SQSTM1-205ENST00000464493 TBPL2Q6SJ96 375 aa12.82□□□□□ -0.36
SQSTM1-205ENST00000464493 ZNF730Q6ZMV8 503 aa12.82□□□□□ -0.36
SQSTM1-205ENST00000464493 MBOAT2Q6ZWT7 520 aa12.82□□□□□ -0.36
SQSTM1-205ENST00000464493 RRM2BQ7LG56 351 aa12.82□□□□□ -0.36
SQSTM1-205ENST00000464493 NRMQ8IXM6 262 aa12.82□□□□□ -0.36
SQSTM1-205ENST00000464493 STEAP2Q8NFT2 490 aa12.82□□□□□ -0.36
SQSTM1-205ENST00000464493 LIPHQ8WWY8 451 aa12.82□□□□□ -0.36
SQSTM1-205ENST00000464493 KISS1RQ969F8 398 aaPredicted RBP12.82□□□□□ -0.36
SQSTM1-205ENST00000464493 BPIFA2Q96DR5 249 aa12.82□□□□□ -0.36
SQSTM1-205ENST00000464493 SEPHS2Q99611 448 aa12.82□□□□□ -0.36
SQSTM1-205ENST00000464493 MED18Q9BUE0 208 aa12.82□□□□□ -0.36
SQSTM1-205ENST00000464493 CADM1Q9BY67 442 aaKnown RBP12.82□□□□□ -0.36
SQSTM1-205ENST00000464493 OR10A4Q9H209 315 aa12.82□□□□□ -0.36
SQSTM1-205ENST00000464493 SLC7A10Q9NS82 523 aa12.82□□□□□ -0.36
SQSTM1-205ENST00000464493 ASB6Q9NWX5 421 aa12.82□□□□□ -0.36
SQSTM1-205ENST00000464493 TAS2R5Q9NYW4 299 aa12.82□□□□□ -0.36
SQSTM1-205ENST00000464493 NOX1Q9Y5S8 564 aa12.82□□□□□ -0.36
SQSTM1-205ENST00000464493 OR6C65A6NJZ3 312 aa12.81□□□□□ -0.36
SQSTM1-205ENST00000464493 C11orf98E9PRG8 122 aa12.81□□□□□ -0.36
SQSTM1-205ENST00000464493 BLOC1S5-TXNDC5H3BN57 136 aa12.81□□□□□ -0.36
SQSTM1-205ENST00000464493 CASKO14936 926 aa12.81□□□□□ -0.36
SQSTM1-205ENST00000464493 RNF13O43567 381 aa12.81□□□□□ -0.36
SQSTM1-205ENST00000464493 ZNF432O94892 652 aa12.81□□□□□ -0.36
SQSTM1-205ENST00000464493 PPP3CBP16298 524 aa12.81□□□□□ -0.36
SQSTM1-205ENST00000464493 IL32P24001 234 aa12.81□□□□□ -0.36
SQSTM1-205ENST00000464493 SSTR2P30874 369 aa12.81□□□□□ -0.36
SQSTM1-205ENST00000464493 SMIM11AP58511 58 aa12.81□□□□□ -0.36
SQSTM1-205ENST00000464493 CBX1P83916 185 aa12.81□□□□□ -0.36
SQSTM1-205ENST00000464493 POU3F1Q03052 451 aaPredicted RBP12.81□□□□□ -0.36
SQSTM1-205ENST00000464493 TLE4Q04727 773 aa12.81□□□□□ -0.36
SQSTM1-205ENST00000464493 PRKCDQ05655 676 aa12.81□□□□□ -0.36
SQSTM1-205ENST00000464493 FAPQ12884 760 aa12.81□□□□□ -0.36
SQSTM1-205ENST00000464493 DAZAP2Q15038 168 aaPredicted RBP12.81□□□□□ -0.36
SQSTM1-205ENST00000464493 TSC22D1Q15714 1073 aa12.81□□□□□ -0.36
SQSTM1-205ENST00000464493 PODNL1Q6PEZ8 512 aa12.81□□□□□ -0.36
SQSTM1-205ENST00000464493 PIWIL3Q7Z3Z3 882 aaKnown RBP12.81□□□□□ -0.36
SQSTM1-205ENST00000464493 NANOGNBQ7Z5D8 188 aa12.81□□□□□ -0.36
SQSTM1-205ENST00000464493 ZDHHC21Q8IVQ6 265 aa12.81□□□□□ -0.36
SQSTM1-205ENST00000464493 CDK20Q8IZL9 346 aa12.81□□□□□ -0.36
SQSTM1-205ENST00000464493 POMGNT2Q8NAT1 580 aa12.81□□□□□ -0.36
SQSTM1-205ENST00000464493 SLC7A13Q8TCU3 470 aa12.81□□□□□ -0.36
SQSTM1-205ENST00000464493 DHRS1Q96LJ7 313 aa12.81□□□□□ -0.36
SQSTM1-205ENST00000464493 ZNF347Q96SE7 839 aa12.81□□□□□ -0.36
SQSTM1-205ENST00000464493 TRIM15Q9C019 465 aa12.81□□□□□ -0.36
SQSTM1-205ENST00000464493 ACTR6Q9GZN1 396 aa12.81□□□□□ -0.36
SQSTM1-205ENST00000464493 SLCO5A1Q9H2Y9 848 aa12.81□□□□□ -0.36
SQSTM1-205ENST00000464493 MALT1Q9UDY8 824 aa12.81□□□□□ -0.36
SQSTM1-205ENST00000464493 RCE1Q9Y256 329 aa12.81□□□□□ -0.36
SQSTM1-205ENST00000464493 TESMINQ9Y4I5 508 aa12.81□□□□□ -0.36
SQSTM1-205ENST00000464493 TRAF3IP2O43734 574 aaPredicted RBP12.8□□□□□ -0.36
SQSTM1-205ENST00000464493 AKAP8O43823 692 aaKnown RBP12.8□□□□□ -0.36
SQSTM1-205ENST00000464493 LYZL6O75951 148 aa12.8□□□□□ -0.36
SQSTM1-205ENST00000464493 KRT33AO76009 404 aa12.8□□□□□ -0.36
SQSTM1-205ENST00000464493 COX5AP20674 150 aa12.8□□□□□ -0.36
SQSTM1-205ENST00000464493 DNAJA1P31689 397 aaKnown RBP12.8□□□□□ -0.36
SQSTM1-205ENST00000464493 SPIBQ01892 262 aa12.8□□□□□ -0.36
SQSTM1-205ENST00000464493 FAM98BQ52LJ0 330 aaKnown RBP12.8□□□□□ -0.36
SQSTM1-205ENST00000464493 FGD3Q5JSP0 725 aa12.8□□□□□ -0.36
SQSTM1-205ENST00000464493 NHLRC1Q6VVB1 395 aa12.8□□□□□ -0.36
SQSTM1-205ENST00000464493 C22orf34Q6ZV56 151 aa12.8□□□□□ -0.36
SQSTM1-205ENST00000464493 BHLHA15Q7RTS1 189 aaPredicted RBP12.8□□□□□ -0.36
SQSTM1-205ENST00000464493 ZNF433Q8N7K0 673 aaPredicted RBP12.8□□□□□ -0.36
SQSTM1-205ENST00000464493 ANKK1Q8NFD2 765 aa12.8□□□□□ -0.36
SQSTM1-205ENST00000464493 OR52J3Q8NH60 311 aa12.8□□□□□ -0.36
SQSTM1-205ENST00000464493 S100PBPQ96BU1 408 aa12.8□□□□□ -0.36
SQSTM1-205ENST00000464493 TXNDC15Q96J42 360 aa12.8□□□□□ -0.36
SQSTM1-205ENST00000464493 USB1Q9BQ65 265 aaKnown RBP12.8□□□□□ -0.36
SQSTM1-205ENST00000464493 MAGIXQ9H6Y5 334 aa12.8□□□□□ -0.36
SQSTM1-205ENST00000464493 MCCC2Q9HCC0 563 aa12.8□□□□□ -0.36
SQSTM1-205ENST00000464493 ZNF226Q9NYT6 803 aa12.8□□□□□ -0.36
SQSTM1-205ENST00000464493 TACC2O95359 2948 aa12.8□□□□□ -0.36
SQSTM1-205ENST00000464493 ALPK2Q86TB3 2170 aa12.8□□□□□ -0.36
SQSTM1-205ENST00000464493 APCP25054 2843 aa12.8□□□□□ -0.36
SQSTM1-205ENST00000464493 ABCA12Q86UK0 2595 aa12.79□□□□□ -0.36
SQSTM1-205ENST00000464493 TRBV4-1A0A0J9YWV2 114 aa12.79□□□□□ -0.36
SQSTM1-205ENST00000464493 CIB4A0PJX0 185 aa12.79□□□□□ -0.36
SQSTM1-205ENST00000464493 AQP12BA6NM10 295 aa12.79□□□□□ -0.36
SQSTM1-205ENST00000464493 A6NNC1 897 aa12.79□□□□□ -0.36
SQSTM1-205ENST00000464493 ZNF726A6NNF4 738 aa12.79□□□□□ -0.36
SQSTM1-205ENST00000464493 PDLIM1O00151 329 aa12.79□□□□□ -0.36
SQSTM1-205ENST00000464493 SLC43A1O75387 559 aa12.79□□□□□ -0.36
SQSTM1-205ENST00000464493 SERPINI2O75830 405 aa12.79□□□□□ -0.36
SQSTM1-205ENST00000464493 GADD45GO95257 159 aa12.79□□□□□ -0.36
SQSTM1-205ENST00000464493 TSPAN19P0C672 248 aa12.79□□□□□ -0.36
SQSTM1-205ENST00000464493 SAGP10523 405 aaPredicted RBP12.79□□□□□ -0.36
SQSTM1-205ENST00000464493 MAKP20794 623 aa12.79□□□□□ -0.36
SQSTM1-205ENST00000464493 MPGP29372 298 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms