RNA–Protein interactions for RNA: ENST00000463511.1

SSNA1-203, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 2

Gene SSNA1, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-203ENST00000463511 PRKAR1BP31321 381 aa20.32■□□□□ 0.84
SSNA1-203ENST00000463511 CRYBA2P53672 197 aa20.32■□□□□ 0.84
SSNA1-203ENST00000463511 OR2B6P58173 313 aa20.32■□□□□ 0.84
SSNA1-203ENST00000463511 ZSWIM7Q19AV6 140 aa20.32■□□□□ 0.84
SSNA1-203ENST00000463511 ZNF544Q6NX49 715 aa20.32■□□□□ 0.84
SSNA1-203ENST00000463511 DHRS4L2Q6PKH6 230 aa20.32■□□□□ 0.84
SSNA1-203ENST00000463511 GRINAQ7Z429 371 aa20.32■□□□□ 0.84
SSNA1-203ENST00000463511 MUS81Q96NY9 551 aa20.32■□□□□ 0.84
SSNA1-203ENST00000463511 TMEM160Q9NX00 188 aa20.32■□□□□ 0.84
SSNA1-203ENST00000463511 HDGFL3Q9Y3E1 203 aa20.32■□□□□ 0.84
SSNA1-203ENST00000463511 ATP23Q9Y6H3 246 aa20.32■□□□□ 0.84
SSNA1-203ENST00000463511 PRORSD1PA6NEY8 169 aa20.31■□□□□ 0.84
SSNA1-203ENST00000463511 DNPH1O43598 174 aa20.31■□□□□ 0.84
SSNA1-203ENST00000463511 LY6HO94772 140 aa20.31■□□□□ 0.84
SSNA1-203ENST00000463511 IGHV4-31P0DP07 118 aa20.31■□□□□ 0.84
SSNA1-203ENST00000463511 GLIPR1L2Q4G1C9 344 aa20.31■□□□□ 0.84
SSNA1-203ENST00000463511 CYB5R2Q6BCY4 276 aa20.31■□□□□ 0.84
SSNA1-203ENST00000463511 COMTD1Q86VU5 262 aa20.31■□□□□ 0.84
SSNA1-203ENST00000463511 ADGRG3Q86Y34 549 aa20.31■□□□□ 0.84
SSNA1-203ENST00000463511 ARMC8Q8IUR7 673 aa20.31■□□□□ 0.84
SSNA1-203ENST00000463511 RNF148Q8N7C7 305 aa20.31■□□□□ 0.84
SSNA1-203ENST00000463511 WDR31Q8NA23 367 aa20.31■□□□□ 0.84
SSNA1-203ENST00000463511 TAMM41Q96BW9 452 aa20.31■□□□□ 0.84
SSNA1-203ENST00000463511 KCTD14Q9BQ13 255 aaPredicted RBP20.31■□□□□ 0.84
SSNA1-203ENST00000463511 TAS2R1Q9NYW7 299 aa20.31■□□□□ 0.84
SSNA1-203ENST00000463511 CD300AQ9UGN4 299 aa20.31■□□□□ 0.84
SSNA1-203ENST00000463511 PDLIM1O00151 329 aa20.3■□□□□ 0.84
SSNA1-203ENST00000463511 F12P00748 615 aaPredicted RBP20.3■□□□□ 0.84
SSNA1-203ENST00000463511 OPN1SWP03999 348 aa20.3■□□□□ 0.84
SSNA1-203ENST00000463511 ACAA2P42765 397 aaKnown RBP20.3■□□□□ 0.84
SSNA1-203ENST00000463511 KRTAP24-1Q3LI83 254 aa20.3■□□□□ 0.84
SSNA1-203ENST00000463511 SMYD1Q8NB12 490 aa20.3■□□□□ 0.84
SSNA1-203ENST00000463511 AMBRA1Q9C0C7 1298 aa20.3■□□□□ 0.84
SSNA1-203ENST00000463511 SHARPINQ9H0F6 387 aa20.3■□□□□ 0.84
SSNA1-203ENST00000463511 C1orf21Q9H246 121 aa20.3■□□□□ 0.84
SSNA1-203ENST00000463511 FKRPQ9H9S5 495 aa20.3■□□□□ 0.84
SSNA1-203ENST00000463511 UPB1Q9UBR1 384 aa20.3■□□□□ 0.84
SSNA1-203ENST00000463511 LPAR3Q9UBY5 353 aa20.3■□□□□ 0.84
SSNA1-203ENST00000463511 NBEAL1Q6ZS30 2694 aa20.3■□□□□ 0.84
SSNA1-203ENST00000463511 AP3D1O14617 1153 aa20.29■□□□□ 0.84
SSNA1-203ENST00000463511 CSF3P09919 207 aa20.29■□□□□ 0.84
SSNA1-203ENST00000463511 GKN3PP0CG01 181 aa20.29■□□□□ 0.84
SSNA1-203ENST00000463511 CD247P20963 164 aa20.29■□□□□ 0.84
SSNA1-203ENST00000463511 KDELR2P33947 212 aa20.29■□□□□ 0.84
SSNA1-203ENST00000463511 EFNA4P52798 201 aa20.29■□□□□ 0.84
SSNA1-203ENST00000463511 H3F3AP84243 136 aa20.29■□□□□ 0.84
SSNA1-203ENST00000463511 CHRNB3Q05901 458 aa20.29■□□□□ 0.84
SSNA1-203ENST00000463511 EPS8Q12929 822 aa20.29■□□□□ 0.84
SSNA1-203ENST00000463511 BNIP1Q12981 228 aa20.29■□□□□ 0.84
SSNA1-203ENST00000463511 DUSP7Q16829 419 aa20.29■□□□□ 0.84
SSNA1-203ENST00000463511 ZNF440Q8IYI8 595 aa20.29■□□□□ 0.84
SSNA1-203ENST00000463511 ARIH2OSQ8N7S6 290 aa20.29■□□□□ 0.84
SSNA1-203ENST00000463511 GPR32P1Q8NGA4 272 aa20.29■□□□□ 0.84
SSNA1-203ENST00000463511 PROX1Q92786 737 aa20.29■□□□□ 0.84
SSNA1-203ENST00000463511 ARMC7Q9H6L4 198 aa20.29■□□□□ 0.84
SSNA1-203ENST00000463511 SLC17A5Q9NRA2 495 aa20.29■□□□□ 0.84
SSNA1-203ENST00000463511 SLC7A10Q9NS82 523 aa20.29■□□□□ 0.84
SSNA1-203ENST00000463511 ATP6V1G2-DDX39BF2Z307 99 aa20.28■□□□□ 0.84
SSNA1-203ENST00000463511 CXCR6O00574 342 aa20.28■□□□□ 0.84
SSNA1-203ENST00000463511 BMP4P12644 408 aa20.28■□□□□ 0.84
SSNA1-203ENST00000463511 PRG2P13727 222 aa20.28■□□□□ 0.84
SSNA1-203ENST00000463511 HSD17B1P14061 328 aa20.28■□□□□ 0.84
SSNA1-203ENST00000463511 USF1P22415 310 aaPredicted RBP20.28■□□□□ 0.84
SSNA1-203ENST00000463511 IDH2P48735 452 aaKnown RBP20.28■□□□□ 0.84
SSNA1-203ENST00000463511 CLK1P49759 484 aaKnown RBP20.28■□□□□ 0.84
SSNA1-203ENST00000463511 CEACAM7Q14002 265 aa20.28■□□□□ 0.84
SSNA1-203ENST00000463511 SAMD4BQ5PRF9 694 aaKnown RBP20.28■□□□□ 0.84
SSNA1-203ENST00000463511 TSPO2Q5TGU0 170 aa20.28■□□□□ 0.84
SSNA1-203ENST00000463511 FAM156AQ8NDB6 213 aa20.28■□□□□ 0.84
SSNA1-203ENST00000463511 BHLHE22Q8NFJ8 381 aaPredicted RBP20.28■□□□□ 0.84
SSNA1-203ENST00000463511 SLC7A6OSQ96CW6 309 aaPredicted RBP20.28■□□□□ 0.84
SSNA1-203ENST00000463511 SLC9A8Q9Y2E8 581 aa20.28■□□□□ 0.84
SSNA1-203ENST00000463511 AMDHD2Q9Y303 409 aa20.28■□□□□ 0.84
SSNA1-203ENST00000463511 FLVCR1Q9Y5Y0 555 aa20.28■□□□□ 0.84
SSNA1-203ENST00000463511 PMF1-BGLAPU3KQ54 211 aa20.28■□□□□ 0.84
SSNA1-203ENST00000463511 TMED7-TICAM2A0A0A6YYA0 188 aa20.27■□□□□ 0.84
SSNA1-203ENST00000463511 CFAP73A6NFT4 308 aa20.27■□□□□ 0.84
SSNA1-203ENST00000463511 TMEM229AB2RXF0 380 aa20.27■□□□□ 0.84
SSNA1-203ENST00000463511 FAAHO00519 579 aa20.27■□□□□ 0.84
SSNA1-203ENST00000463511 GSTA4O15217 222 aa20.27■□□□□ 0.84
SSNA1-203ENST00000463511 FRS3O43559 492 aa20.27■□□□□ 0.84
SSNA1-203ENST00000463511 FKBP2P26885 142 aaKnown RBP20.27■□□□□ 0.84
SSNA1-203ENST00000463511 APOBEC3AP31941 199 aaPredicted RBP20.27■□□□□ 0.84
SSNA1-203ENST00000463511 LSM11P83369 360 aaKnown RBP eCLIP20.27■□□□□ 0.84
SSNA1-203ENST00000463511 C17orf78Q8N4C9 275 aa20.27■□□□□ 0.84
SSNA1-203ENST00000463511 C1orf162Q8NEQ5 155 aaPredicted RBP20.27■□□□□ 0.84
SSNA1-203ENST00000463511 SLC26A7Q8TE54 656 aa20.27■□□□□ 0.84
SSNA1-203ENST00000463511 SLC35B4Q969S0 331 aa20.27■□□□□ 0.84
SSNA1-203ENST00000463511 WFDC6Q9BQY6 131 aa20.27■□□□□ 0.84
SSNA1-203ENST00000463511 EGFL7Q9UHF1 273 aa20.27■□□□□ 0.84
SSNA1-203ENST00000463511 TRAPPC4Q9Y296 219 aa20.27■□□□□ 0.84
SSNA1-203ENST00000463511 TMED7Q9Y3B3 224 aa20.27■□□□□ 0.84
SSNA1-203ENST00000463511 LMX1BO60663 402 aa20.26■□□□□ 0.83
SSNA1-203ENST00000463511 LGI1O95970 557 aa20.26■□□□□ 0.83
SSNA1-203ENST00000463511 C8BP07358 591 aa20.26■□□□□ 0.83
SSNA1-203ENST00000463511 IMPDH2P12268 514 aa20.26■□□□□ 0.83
SSNA1-203ENST00000463511 NCK1P16333 377 aa20.26■□□□□ 0.83
SSNA1-203ENST00000463511 TCN1P20061 433 aaPredicted RBP20.26■□□□□ 0.83
SSNA1-203ENST00000463511 IGFBP5P24593 272 aa20.26■□□□□ 0.83
SSNA1-203ENST00000463511 MSX2P35548 267 aaPredicted RBP20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms