RNA–Protein interactions for RNA: ENST00000463097.1

COPS3-205, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 288 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-205ENST00000463097 BBOX1O75936 387 aa4.52□□□□□ -1.69
COPS3-205ENST00000463097 FLOT1O75955 427 aa4.52□□□□□ -1.69
COPS3-205ENST00000463097 VENTXO95231 258 aa4.52□□□□□ -1.69
COPS3-205ENST00000463097 STAMBPO95630 424 aa4.52□□□□□ -1.69
COPS3-205ENST00000463097 ANXA5P08758 320 aa4.52□□□□□ -1.69
COPS3-205ENST00000463097 HOXD4P09016 255 aaPredicted RBP4.52□□□□□ -1.69
COPS3-205ENST00000463097 RHOXF2BP0C7M4 288 aa4.52□□□□□ -1.69
COPS3-205ENST00000463097 EIF2S2P20042 333 aaKnown RBP4.52□□□□□ -1.69
COPS3-205ENST00000463097 HMOX2P30519 316 aa4.52□□□□□ -1.69
COPS3-205ENST00000463097 HTR1FP30939 366 aa4.52□□□□□ -1.69
COPS3-205ENST00000463097 GCKP35557 465 aa4.52□□□□□ -1.69
COPS3-205ENST00000463097 HSD17B2P37059 387 aa4.52□□□□□ -1.69
COPS3-205ENST00000463097 NUP62P37198 522 aaPredicted RBP4.52□□□□□ -1.69
COPS3-205ENST00000463097 LMO4P61968 165 aa4.52□□□□□ -1.69
COPS3-205ENST00000463097 RAB11AP62491 216 aa4.52□□□□□ -1.69
COPS3-205ENST00000463097 MRPS22P82650 360 aaKnown RBP4.52□□□□□ -1.69
COPS3-205ENST00000463097 IRF8Q02556 426 aa4.52□□□□□ -1.69
COPS3-205ENST00000463097 RAB11BQ15907 218 aa4.52□□□□□ -1.69
COPS3-205ENST00000463097 LY6G6FQ5SQ64 297 aa4.52□□□□□ -1.69
COPS3-205ENST00000463097 GPRC6AQ5T6X5 926 aa4.52□□□□□ -1.69
COPS3-205ENST00000463097 C9orf135Q5VTT2 229 aa4.52□□□□□ -1.69
COPS3-205ENST00000463097 SLC22A10Q63ZE4 541 aa4.52□□□□□ -1.69
COPS3-205ENST00000463097 Q6ZSR3 168 aa4.52□□□□□ -1.69
COPS3-205ENST00000463097 ACOT7LQ6ZUV0 252 aa4.52□□□□□ -1.69
COPS3-205ENST00000463097 TIPARPQ7Z3E1 657 aaKnown RBP4.52□□□□□ -1.69
COPS3-205ENST00000463097 NRMQ8IXM6 262 aa4.52□□□□□ -1.69
COPS3-205ENST00000463097 OR2A12Q8NGT7 310 aa4.52□□□□□ -1.69
COPS3-205ENST00000463097 VN1R17PQ8TDU5 208 aa4.52□□□□□ -1.69
COPS3-205ENST00000463097 ATP5SQ99766 215 aa4.52□□□□□ -1.69
COPS3-205ENST00000463097 RHOXF2Q9BQY4 288 aa4.52□□□□□ -1.69
COPS3-205ENST00000463097 SIKE1Q9BRV8 207 aa4.52□□□□□ -1.69
COPS3-205ENST00000463097 MFFQ9GZY8 342 aa4.52□□□□□ -1.69
COPS3-205ENST00000463097 CCNB1IP1Q9NPC3 277 aa4.52□□□□□ -1.69
COPS3-205ENST00000463097 SCRT2Q9NQ03 307 aa4.52□□□□□ -1.69
COPS3-205ENST00000463097 DHRS4-AS1Q9P1J3 65 aa4.52□□□□□ -1.69
COPS3-205ENST00000463097 STAP1Q9ULZ2 295 aa4.52□□□□□ -1.69
COPS3-205ENST00000463097 PTPRTO14522 1441 aa4.52□□□□□ -1.69
COPS3-205ENST00000463097 TRAPPC8Q9Y2L5 1435 aa4.52□□□□□ -1.69
COPS3-205ENST00000463097 KIAA0556O60303 1618 aa4.51□□□□□ -1.69
COPS3-205ENST00000463097 TRAV9-2A0A087WT02 112 aa4.51□□□□□ -1.69
COPS3-205ENST00000463097 NSG1A0A0A6YYJ2 146 aa4.51□□□□□ -1.69
COPS3-205ENST00000463097 SMCO2A6NFE2 343 aa4.51□□□□□ -1.69
COPS3-205ENST00000463097 LRRIQ3A6PVS8 624 aaPredicted RBP4.51□□□□□ -1.69
COPS3-205ENST00000463097 GABRR3A8MPY1 467 aa4.51□□□□□ -1.69
COPS3-205ENST00000463097 PRSS44E7EML9 344 aa4.51□□□□□ -1.69
COPS3-205ENST00000463097 M0QX08 132 aa4.51□□□□□ -1.69
COPS3-205ENST00000463097 AIM2O14862 343 aa4.51□□□□□ -1.69
COPS3-205ENST00000463097 KBTBD11O94819 623 aa4.51□□□□□ -1.69
COPS3-205ENST00000463097 IVLP07476 585 aa4.51□□□□□ -1.69
COPS3-205ENST00000463097 PLEKP08567 350 aaPredicted RBP4.51□□□□□ -1.69
COPS3-205ENST00000463097 NAA10P41227 235 aaPredicted RBP4.51□□□□□ -1.69
COPS3-205ENST00000463097 NSG1P42857 185 aa4.51□□□□□ -1.69
COPS3-205ENST00000463097 KIR2DS2P43631 304 aa4.51□□□□□ -1.69
COPS3-205ENST00000463097 YAP1P46937 504 aaKnown RBP4.51□□□□□ -1.69
COPS3-205ENST00000463097 PLK1P53350 603 aa4.51□□□□□ -1.69
COPS3-205ENST00000463097 BIDP55957 195 aa4.51□□□□□ -1.69
COPS3-205ENST00000463097 DAOAP59103 153 aa4.51□□□□□ -1.69
COPS3-205ENST00000463097 PAX8Q06710 450 aa4.51□□□□□ -1.69
COPS3-205ENST00000463097 TRDNQ13061 729 aa4.51□□□□□ -1.69
COPS3-205ENST00000463097 ITIH4Q14624 930 aa4.51□□□□□ -1.69
COPS3-205ENST00000463097 KRTAP24-1Q3LI83 254 aa4.51□□□□□ -1.69
COPS3-205ENST00000463097 SAMD4BQ5PRF9 694 aaKnown RBP4.51□□□□□ -1.69
COPS3-205ENST00000463097 C22orf42Q6IC83 251 aa4.51□□□□□ -1.69
COPS3-205ENST00000463097 OR5M10Q6IEU7 315 aa4.51□□□□□ -1.69
COPS3-205ENST00000463097 ZNF600Q6ZNG1 722 aa4.51□□□□□ -1.69
COPS3-205ENST00000463097 SLC16A14Q7RTX9 510 aa4.51□□□□□ -1.69
COPS3-205ENST00000463097 PLA2G4DQ86XP0 818 aa4.51□□□□□ -1.69
COPS3-205ENST00000463097 MMAAQ8IVH4 418 aaKnown RBP4.51□□□□□ -1.69
COPS3-205ENST00000463097 ITPRIPQ8IWB1 547 aa4.51□□□□□ -1.69
COPS3-205ENST00000463097 CCDC26Q8TAB7 109 aa4.51□□□□□ -1.69
COPS3-205ENST00000463097 PYROXD1Q8WU10 500 aa4.51□□□□□ -1.69
COPS3-205ENST00000463097 NR4A3Q92570 626 aa4.51□□□□□ -1.69
COPS3-205ENST00000463097 C8orf44Q96CB5 159 aa4.51□□□□□ -1.69
COPS3-205ENST00000463097 LINC00479Q96M42 142 aa4.51□□□□□ -1.69
COPS3-205ENST00000463097 MRPL45Q9BRJ2 306 aaKnown RBP4.51□□□□□ -1.69
COPS3-205ENST00000463097 FAIM2Q9BWQ8 316 aa4.51□□□□□ -1.69
COPS3-205ENST00000463097 SRXN1Q9BYN0 137 aa4.51□□□□□ -1.69
COPS3-205ENST00000463097 API5Q9BZZ5 524 aaKnown RBP4.51□□□□□ -1.69
COPS3-205ENST00000463097 C8orf33Q9H7E9 229 aaPredicted RBP4.51□□□□□ -1.69
COPS3-205ENST00000463097 UGT1A10Q9HAW8 530 aa4.51□□□□□ -1.69
COPS3-205ENST00000463097 OR1A1Q9P1Q5 309 aa4.51□□□□□ -1.69
COPS3-205ENST00000463097 DPM3Q9P2X0 92 aa4.51□□□□□ -1.69
COPS3-205ENST00000463097 RHBDD3Q9Y3P4 386 aa4.51□□□□□ -1.69
COPS3-205ENST00000463097 FAM135BQ49AJ0 1406 aa4.51□□□□□ -1.69
COPS3-205ENST00000463097 PRG4Q92954 1404 aaPredicted RBP4.51□□□□□ -1.69
COPS3-205ENST00000463097 KDM5AP29375 1690 aaKnown RBP4.51□□□□□ -1.69
COPS3-205ENST00000463097 MYOM1P52179 1685 aa4.51□□□□□ -1.69
COPS3-205ENST00000463097 SHPRHQ149N8 1683 aa4.51□□□□□ -1.69
COPS3-205ENST00000463097 MADDQ8WXG6 1647 aa4.5□□□□□ -1.69
COPS3-205ENST00000463097 ERVK-7P63135 1459 aa4.5□□□□□ -1.69
COPS3-205ENST00000463097 SMIM28A0A1B0GU29 152 aa4.5□□□□□ -1.69
COPS3-205ENST00000463097 DHRS7CA6NNS2 312 aa4.5□□□□□ -1.69
COPS3-205ENST00000463097 VGLL3A8MV65 326 aa4.5□□□□□ -1.69
COPS3-205ENST00000463097 ZNF701M0R085 212 aaPredicted RBP4.5□□□□□ -1.69
COPS3-205ENST00000463097 TSPAN13O95857 204 aa4.5□□□□□ -1.69
COPS3-205ENST00000463097 CSTAP01040 98 aa4.5□□□□□ -1.69
COPS3-205ENST00000463097 MYL2P10916 166 aa4.5□□□□□ -1.69
COPS3-205ENST00000463097 GSSP48637 474 aa4.5□□□□□ -1.69
COPS3-205ENST00000463097 BCAP31P51572 246 aa4.5□□□□□ -1.69
COPS3-205ENST00000463097 GTF2A1P52655 376 aaPredicted RBP4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms