RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 C2P06681 752 aa2.3□□□□□ -2.04
VCL-203ENST00000461383 GIPP09681 153 aaPredicted RBP2.3□□□□□ -2.04
VCL-203ENST00000461383 CD1EP15812 388 aa2.3□□□□□ -2.04
VCL-203ENST00000461383 KITLGP21583 273 aa2.3□□□□□ -2.04
VCL-203ENST00000461383 CD1BP29016 333 aa2.3□□□□□ -2.04
VCL-203ENST00000461383 FDFT1P37268 417 aa2.3□□□□□ -2.04
VCL-203ENST00000461383 YAP1P46937 504 aaKnown RBP2.3□□□□□ -2.04
VCL-203ENST00000461383 PRRX1P54821 245 aa2.3□□□□□ -2.04
VCL-203ENST00000461383 APOC4P55056 127 aa2.3□□□□□ -2.04
VCL-203ENST00000461383 PRPS1P60891 318 aa2.3□□□□□ -2.04
VCL-203ENST00000461383 PDIA2Q13087 525 aaKnown RBP2.3□□□□□ -2.04
VCL-203ENST00000461383 IDI1Q13907 227 aa2.3□□□□□ -2.04
VCL-203ENST00000461383 ZNF77Q15935 545 aa2.3□□□□□ -2.04
VCL-203ENST00000461383 C1orf100Q5SVJ3 147 aa2.3□□□□□ -2.04
VCL-203ENST00000461383 C9orf129Q5T035 196 aaKnown RBP2.3□□□□□ -2.04
VCL-203ENST00000461383 FHL5Q5TD97 284 aa2.3□□□□□ -2.04
VCL-203ENST00000461383 GPR157Q5UAW9 335 aa2.3□□□□□ -2.04
VCL-203ENST00000461383 METAP1DQ6UB28 335 aaPredicted RBP2.3□□□□□ -2.04
VCL-203ENST00000461383 RNF165Q6ZSG1 346 aa2.3□□□□□ -2.04
VCL-203ENST00000461383 CEND1Q8N111 149 aa2.3□□□□□ -2.04
VCL-203ENST00000461383 BBOF1Q8ND07 529 aa2.3□□□□□ -2.04
VCL-203ENST00000461383 OR6C4Q8NGE1 309 aa2.3□□□□□ -2.04
VCL-203ENST00000461383 OR52K2Q8NGK3 314 aa2.3□□□□□ -2.04
VCL-203ENST00000461383 RAB3IL1Q8TBN0 382 aa2.3□□□□□ -2.04
VCL-203ENST00000461383 SETD7Q8WTS6 366 aaKnown RBP2.3□□□□□ -2.04
VCL-203ENST00000461383 TM4SF19Q96DZ7 209 aa2.3□□□□□ -2.04
VCL-203ENST00000461383 MS4A4EQ96PG1 132 aa2.3□□□□□ -2.04
VCL-203ENST00000461383 TECTBQ96PL2 329 aa2.3□□□□□ -2.04
VCL-203ENST00000461383 OR8B4Q96RC9 309 aa2.3□□□□□ -2.04
VCL-203ENST00000461383 TMEM59Q9BXS4 323 aa2.3□□□□□ -2.04
VCL-203ENST00000461383 ILKAPQ9H0C8 392 aaPredicted RBP2.3□□□□□ -2.04
VCL-203ENST00000461383 SIAEQ9HAT2 523 aa2.3□□□□□ -2.04
VCL-203ENST00000461383 ADAP2Q9NPF8 381 aa2.3□□□□□ -2.04
VCL-203ENST00000461383 CSDC2Q9Y534 153 aaKnown RBP2.3□□□□□ -2.04
VCL-203ENST00000461383 FANCIQ9NVI1 1328 aa2.3□□□□□ -2.04
VCL-203ENST00000461383 ZNF318Q5VUA4 2279 aa2.3□□□□□ -2.04
VCL-203ENST00000461383 NSD2O96028 1365 aa2.29□□□□□ -2.04
VCL-203ENST00000461383 A0A1W2PPE3 182 aa2.29□□□□□ -2.04
VCL-203ENST00000461383 AIM2O14862 343 aa2.29□□□□□ -2.04
VCL-203ENST00000461383 DFNA5O60443 496 aa2.29□□□□□ -2.04
VCL-203ENST00000461383 SRSF10O75494 262 aaKnown RBP2.29□□□□□ -2.04
VCL-203ENST00000461383 SUPT7LO94864 414 aa2.29□□□□□ -2.04
VCL-203ENST00000461383 ACTL6AO96019 429 aa2.29□□□□□ -2.04
VCL-203ENST00000461383 KRT14P02533 472 aa2.29□□□□□ -2.04
VCL-203ENST00000461383 FGF1P05230 155 aa2.29□□□□□ -2.04
VCL-203ENST00000461383 PABPC4LP0CB38 370 aaKnown RBP2.29□□□□□ -2.04
VCL-203ENST00000461383 HPGDP15428 266 aa2.29□□□□□ -2.04
VCL-203ENST00000461383 TCN1P20061 433 aaPredicted RBP2.29□□□□□ -2.04
VCL-203ENST00000461383 PRDX3P30048 256 aaKnown RBP2.29□□□□□ -2.04
VCL-203ENST00000461383 CAV2P51636 162 aa2.29□□□□□ -2.04
VCL-203ENST00000461383 ACLYP53396 1101 aa2.29□□□□□ -2.04
VCL-203ENST00000461383 CDH6P55285 790 aa2.29□□□□□ -2.04
VCL-203ENST00000461383 RGS8P57771 180 aaPredicted RBP2.29□□□□□ -2.04
VCL-203ENST00000461383 PPIL2Q13356 520 aa2.29□□□□□ -2.04
VCL-203ENST00000461383 CYTH1Q15438 398 aa2.29□□□□□ -2.04
VCL-203ENST00000461383 PAGE3Q5JUK9 113 aa2.29□□□□□ -2.04
VCL-203ENST00000461383 SPANXN2Q5MJ10 180 aa2.29□□□□□ -2.04
VCL-203ENST00000461383 ZNF544Q6NX49 715 aa2.29□□□□□ -2.04
VCL-203ENST00000461383 TRIM40Q6P9F5 258 aa2.29□□□□□ -2.04
VCL-203ENST00000461383 TGIF2LYQ8IUE0 185 aa2.29□□□□□ -2.04
VCL-203ENST00000461383 ZNF584Q8IVC4 421 aa2.29□□□□□ -2.04
VCL-203ENST00000461383 C6orf223Q8N319 242 aa2.29□□□□□ -2.04
VCL-203ENST00000461383 C11orf42Q8N5U0 333 aa2.29□□□□□ -2.04
VCL-203ENST00000461383 CCDC54Q8NEL0 328 aa2.29□□□□□ -2.04
VCL-203ENST00000461383 B3GNT7Q8NFL0 401 aa2.29□□□□□ -2.04
VCL-203ENST00000461383 C7orf33Q8WU49 177 aa2.29□□□□□ -2.04
VCL-203ENST00000461383 SMARCD2Q92925 531 aa2.29□□□□□ -2.04
VCL-203ENST00000461383 MCUR1Q96AQ8 359 aa2.29□□□□□ -2.04
VCL-203ENST00000461383 KCNA7Q96RP8 456 aa2.29□□□□□ -2.04
VCL-203ENST00000461383 CHP1Q99653 195 aa2.29□□□□□ -2.04
VCL-203ENST00000461383 KCTD14Q9BQ13 255 aaPredicted RBP2.29□□□□□ -2.04
VCL-203ENST00000461383 YTHDF1Q9BYJ9 559 aaKnown RBP2.29□□□□□ -2.04
VCL-203ENST00000461383 OR51J1Q9H342 316 aa2.29□□□□□ -2.04
VCL-203ENST00000461383 RANBP3Q9H6Z4 567 aaPredicted RBP2.29□□□□□ -2.04
VCL-203ENST00000461383 NEK6Q9HC98 313 aa2.29□□□□□ -2.04
VCL-203ENST00000461383 GLRX2Q9NS18 164 aa2.29□□□□□ -2.04
VCL-203ENST00000461383 SAMSN1Q9NSI8 373 aaKnown RBP2.29□□□□□ -2.04
VCL-203ENST00000461383 QPCTLQ9NXS2 382 aa2.29□□□□□ -2.04
VCL-203ENST00000461383 PITPNC1Q9UKF7 332 aa2.29□□□□□ -2.04
VCL-203ENST00000461383 TP53TG3Q9ULZ0 132 aa2.29□□□□□ -2.04
VCL-203ENST00000461383 TMED5Q9Y3A6 229 aa2.29□□□□□ -2.04
VCL-203ENST00000461383 SLC25A15Q9Y619 301 aa2.29□□□□□ -2.04
VCL-203ENST00000461383 CDH10Q9Y6N8 788 aa2.29□□□□□ -2.04
VCL-203ENST00000461383 A0A1W2PPV9 198 aa2.28□□□□□ -2.04
VCL-203ENST00000461383 SMCO2A6NFE2 343 aa2.28□□□□□ -2.04
VCL-203ENST00000461383 C12orf71A8MTZ7 269 aa2.28□□□□□ -2.04
VCL-203ENST00000461383 A8MUA0 341 aa2.28□□□□□ -2.04
VCL-203ENST00000461383 TCP11X1B4DZS4 312 aa2.28□□□□□ -2.04
VCL-203ENST00000461383 CCL21O00585 134 aa2.28□□□□□ -2.04
VCL-203ENST00000461383 EMC8O43402 210 aa2.28□□□□□ -2.04
VCL-203ENST00000461383 KLHL41O60662 606 aa2.28□□□□□ -2.04
VCL-203ENST00000461383 CDH16O75309 829 aa2.28□□□□□ -2.04
VCL-203ENST00000461383 OR2J3O76001 311 aa2.28□□□□□ -2.04
VCL-203ENST00000461383 C1orf105O95561 183 aa2.28□□□□□ -2.04
VCL-203ENST00000461383 FTH1P02794 183 aa2.28□□□□□ -2.04
VCL-203ENST00000461383 CRYGBP07316 175 aa2.28□□□□□ -2.04
VCL-203ENST00000461383 ICAM2P13598 275 aa2.28□□□□□ -2.04
VCL-203ENST00000461383 GALP22466 123 aa2.28□□□□□ -2.04
VCL-203ENST00000461383 RRM2P31350 389 aa2.28□□□□□ -2.04
VCL-203ENST00000461383 VHLP40337 213 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms