RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 GMPR2Q9P2T1 348 aaKnown RBP13.52□□□□□ -0.25
VARS-219ENST00000461328 B3GAT1Q9P2W7 334 aa13.52□□□□□ -0.25
VARS-219ENST00000461328 RCE1Q9Y256 329 aa13.52□□□□□ -0.25
VARS-219ENST00000461328 DSCAMO60469 2012 aa13.52□□□□□ -0.25
VARS-219ENST00000461328 MTORP42345 2549 aa13.52□□□□□ -0.25
VARS-219ENST00000461328 LRRN3E7EW58 273 aa13.51□□□□□ -0.25
VARS-219ENST00000461328 PDLIM1O00151 329 aa13.51□□□□□ -0.25
VARS-219ENST00000461328 CXCR6O00574 342 aa13.51□□□□□ -0.25
VARS-219ENST00000461328 TMCC2O75069 709 aa13.51□□□□□ -0.25
VARS-219ENST00000461328 FZD7O75084 574 aa13.51□□□□□ -0.25
VARS-219ENST00000461328 ZNF682O95780 498 aa13.51□□□□□ -0.25
VARS-219ENST00000461328 CH25HO95992 272 aa13.51□□□□□ -0.25
VARS-219ENST00000461328 UMPSP11172 480 aa13.51□□□□□ -0.25
VARS-219ENST00000461328 AHCYP23526 432 aa13.51□□□□□ -0.25
VARS-219ENST00000461328 GSK3BP49841 420 aa13.51□□□□□ -0.25
VARS-219ENST00000461328 ZNF83P51522 516 aa13.51□□□□□ -0.25
VARS-219ENST00000461328 PSME3P61289 254 aa13.51□□□□□ -0.25
VARS-219ENST00000461328 RPS4XP62701 263 aaKnown RBP13.51□□□□□ -0.25
VARS-219ENST00000461328 POU3F1Q03052 451 aaPredicted RBP13.51□□□□□ -0.25
VARS-219ENST00000461328 LGALS3BPQ08380 585 aa13.51□□□□□ -0.25
VARS-219ENST00000461328 PUDPQ08623 228 aa13.51□□□□□ -0.25
VARS-219ENST00000461328 PRSS57Q6UWY2 283 aa13.51□□□□□ -0.25
VARS-219ENST00000461328 GPR137CQ8N3F9 429 aa13.51□□□□□ -0.25
VARS-219ENST00000461328 C17orf78Q8N4C9 275 aa13.51□□□□□ -0.25
VARS-219ENST00000461328 LILRB1Q8NHL6 650 aaPredicted RBP13.51□□□□□ -0.25
VARS-219ENST00000461328 IGFBPL1Q8WX77 278 aa13.51□□□□□ -0.25
VARS-219ENST00000461328 NEUROG1Q92886 237 aa13.51□□□□□ -0.25
VARS-219ENST00000461328 C18orf12Q96KH6 178 aa13.51□□□□□ -0.25
VARS-219ENST00000461328 Q96MF0 132 aa13.51□□□□□ -0.25
VARS-219ENST00000461328 GSX1Q9H4S2 264 aaPredicted RBP13.51□□□□□ -0.25
VARS-219ENST00000461328 MRPL39Q9NYK5 338 aaKnown RBP13.51□□□□□ -0.25
VARS-219ENST00000461328 LAMP3Q9UQV4 416 aa13.51□□□□□ -0.25
VARS-219ENST00000461328 ARL2BPQ9Y2Y0 163 aa13.51□□□□□ -0.25
VARS-219ENST00000461328 AMDHD2Q9Y303 409 aa13.51□□□□□ -0.25
VARS-219ENST00000461328 FLNAP21333 2647 aaKnown RBP13.51□□□□□ -0.25
VARS-219ENST00000461328 PRR14LQ5THK1 2151 aa13.51□□□□□ -0.25
VARS-219ENST00000461328 C11orf98E9PRG8 122 aa13.5□□□□□ -0.25
VARS-219ENST00000461328 M0R1B8 84 aa13.5□□□□□ -0.25
VARS-219ENST00000461328 TRAF3IP2O43734 574 aaPredicted RBP13.5□□□□□ -0.25
VARS-219ENST00000461328 UPK3AO75631 287 aa13.5□□□□□ -0.25
VARS-219ENST00000461328 OR5F1O95221 314 aa13.5□□□□□ -0.25
VARS-219ENST00000461328 THY1P04216 161 aa13.5□□□□□ -0.25
VARS-219ENST00000461328 HIST1H2ABP04908 130 aa13.5□□□□□ -0.25
VARS-219ENST00000461328 ADORA3P0DMS8 318 aa13.5□□□□□ -0.25
VARS-219ENST00000461328 IFNA8P32881 189 aa13.5□□□□□ -0.25
VARS-219ENST00000461328 ROR2Q01974 943 aaKnown RBP13.5□□□□□ -0.25
VARS-219ENST00000461328 LTBQ06643 244 aa13.5□□□□□ -0.25
VARS-219ENST00000461328 ZNF672Q499Z4 452 aaPredicted RBP13.5□□□□□ -0.25
VARS-219ENST00000461328 CARD17Q5XLA6 110 aa13.5□□□□□ -0.25
VARS-219ENST00000461328 TMEM108Q6UXF1 575 aa13.5□□□□□ -0.25
VARS-219ENST00000461328 HIST3H2AQ7L7L0 130 aa13.5□□□□□ -0.25
VARS-219ENST00000461328 BIVMQ86UB2 503 aa13.5□□□□□ -0.25
VARS-219ENST00000461328 TSPYL5Q86VY4 417 aaPredicted RBP13.5□□□□□ -0.25
VARS-219ENST00000461328 PIAS4Q8N2W9 510 aaPredicted RBP13.5□□□□□ -0.25
VARS-219ENST00000461328 OR5J2Q8NH18 312 aa13.5□□□□□ -0.25
VARS-219ENST00000461328 HIST1H2ACQ93077 130 aa13.5□□□□□ -0.25
VARS-219ENST00000461328 FAM162AQ96A26 154 aa13.5□□□□□ -0.25
VARS-219ENST00000461328 MUS81Q96NY9 551 aa13.5□□□□□ -0.25
VARS-219ENST00000461328 C1QTNF6Q9BXI9 259 aa13.5□□□□□ -0.25
VARS-219ENST00000461328 SLC19A3Q9BZV2 496 aa13.5□□□□□ -0.25
VARS-219ENST00000461328 AMBRA1Q9C0C7 1298 aa13.5□□□□□ -0.25
VARS-219ENST00000461328 POLR2J2Q9GZM3 115 aaKnown RBP13.5□□□□□ -0.25
VARS-219ENST00000461328 POLR2J3Q9H1A7 115 aaKnown RBP13.5□□□□□ -0.25
VARS-219ENST00000461328 FKRPQ9H9S5 495 aa13.5□□□□□ -0.25
VARS-219ENST00000461328 SPAG4Q9NPE6 437 aa13.5□□□□□ -0.25
VARS-219ENST00000461328 NANSQ9NR45 359 aa13.5□□□□□ -0.25
VARS-219ENST00000461328 SLC17A5Q9NRA2 495 aa13.5□□□□□ -0.25
VARS-219ENST00000461328 ADA2Q9NZK5 511 aa13.5□□□□□ -0.25
VARS-219ENST00000461328 NPAP1Q9NZP6 1156 aa13.5□□□□□ -0.25
VARS-219ENST00000461328 POU2F3Q9UKI9 436 aa13.5□□□□□ -0.25
VARS-219ENST00000461328 MAGED1Q9Y5V3 778 aaPredicted RBP13.5□□□□□ -0.25
VARS-219ENST00000461328 SLC25A15Q9Y619 301 aa13.5□□□□□ -0.25
VARS-219ENST00000461328 C2CD3Q4AC94 2353 aa13.5□□□□□ -0.25
VARS-219ENST00000461328 ROS1P08922 2347 aa13.49□□□□□ -0.25
VARS-219ENST00000461328 ABCD4O14678 606 aa13.49□□□□□ -0.25
VARS-219ENST00000461328 DCTN3O75935 186 aa13.49□□□□□ -0.25
VARS-219ENST00000461328 LYPD3O95274 346 aa13.49□□□□□ -0.25
VARS-219ENST00000461328 WNT11O96014 354 aa13.49□□□□□ -0.25
VARS-219ENST00000461328 HPRP00739 348 aa13.49□□□□□ -0.25
VARS-219ENST00000461328 IFNW1P05000 195 aa13.49□□□□□ -0.25
VARS-219ENST00000461328 INHBBP09529 407 aa13.49□□□□□ -0.25
VARS-219ENST00000461328 CDH11P55287 796 aa13.49□□□□□ -0.25
VARS-219ENST00000461328 ATP5J2P56134 94 aa13.49□□□□□ -0.25
VARS-219ENST00000461328 PRPS1P60891 318 aa13.49□□□□□ -0.25
VARS-219ENST00000461328 UBE2NP61088 152 aaKnown RBP13.49□□□□□ -0.25
VARS-219ENST00000461328 PIN1Q13526 163 aaPredicted RBP13.49□□□□□ -0.25
VARS-219ENST00000461328 ZNF74Q16587 644 aa13.49□□□□□ -0.25
VARS-219ENST00000461328 HIKESHIQ53FT3 197 aa13.49□□□□□ -0.25
VARS-219ENST00000461328 C8orf82Q6P1X6 216 aaPredicted RBP13.49□□□□□ -0.25
VARS-219ENST00000461328 LINC00114Q6XXX2 140 aa13.49□□□□□ -0.25
VARS-219ENST00000461328 FKBP9P1Q75LS8 142 aa13.49□□□□□ -0.25
VARS-219ENST00000461328 NANOGNBQ7Z5D8 188 aa13.49□□□□□ -0.25
VARS-219ENST00000461328 PIK3C3Q8NEB9 887 aa13.49□□□□□ -0.25
VARS-219ENST00000461328 SMAP2Q8WU79 429 aaPredicted RBP13.49□□□□□ -0.25
VARS-219ENST00000461328 GTPBP3Q969Y2 492 aaKnown RBP13.49□□□□□ -0.25
VARS-219ENST00000461328 LRRC37BQ96QE4 947 aa13.49□□□□□ -0.25
VARS-219ENST00000461328 LINC00470Q9BZP3 86 aa13.49□□□□□ -0.25
VARS-219ENST00000461328 ZNF701Q9NV72 531 aaPredicted RBP13.49□□□□□ -0.25
VARS-219ENST00000461328 RIMS3Q9UJD0 308 aa13.49□□□□□ -0.25
VARS-219ENST00000461328 NOX1Q9Y5S8 564 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms