RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 FBP2O00757 339 aa14.88□□□□□ -0.03
TOP3A-202ENST00000461127 BCL10O95999 233 aa14.88□□□□□ -0.03
TOP3A-202ENST00000461127 ADRA2AP08913 450 aa14.88□□□□□ -0.03
TOP3A-202ENST00000461127 CECR9P0C854 216 aa14.88□□□□□ -0.03
TOP3A-202ENST00000461127 T-ENOLP0DO92 83 aa14.88□□□□□ -0.03
TOP3A-202ENST00000461127 SAGP10523 405 aaPredicted RBP14.88□□□□□ -0.03
TOP3A-202ENST00000461127 THBS4P35443 961 aa14.88□□□□□ -0.03
TOP3A-202ENST00000461127 RASSF2P50749 326 aa14.88□□□□□ -0.03
TOP3A-202ENST00000461127 NFYCQ13952 458 aa14.88□□□□□ -0.03
TOP3A-202ENST00000461127 SLC17A1Q14916 467 aa14.88□□□□□ -0.03
TOP3A-202ENST00000461127 ZNF141Q15928 474 aa14.88□□□□□ -0.03
TOP3A-202ENST00000461127 AAED1Q7RTV5 226 aa14.88□□□□□ -0.03
TOP3A-202ENST00000461127 ANKRD46Q86W74 232 aa14.88□□□□□ -0.03
TOP3A-202ENST00000461127 SDF2Q99470 211 aa14.88□□□□□ -0.03
TOP3A-202ENST00000461127 GPATCH2Q9NW75 528 aa14.88□□□□□ -0.03
TOP3A-202ENST00000461127 GID8Q9NWU2 228 aa14.88□□□□□ -0.03
TOP3A-202ENST00000461127 CRNNQ9UBG3 495 aaPredicted RBP14.88□□□□□ -0.03
TOP3A-202ENST00000461127 ZNF587BE7ETH6 402 aa14.87□□□□□ -0.03
TOP3A-202ENST00000461127 RNASET2O00584 256 aaKnown RBP14.87□□□□□ -0.03
TOP3A-202ENST00000461127 STX11O75558 287 aa14.87□□□□□ -0.03
TOP3A-202ENST00000461127 CPSF4O95639 269 aaKnown RBP14.87□□□□□ -0.03
TOP3A-202ENST00000461127 AK1P00568 194 aa14.87□□□□□ -0.03
TOP3A-202ENST00000461127 CALCRP30988 508 aa14.87□□□□□ -0.03
TOP3A-202ENST00000461127 RETREG3Q86VR2 466 aa14.87□□□□□ -0.03
TOP3A-202ENST00000461127 BPIFB2Q8N4F0 458 aa14.87□□□□□ -0.03
TOP3A-202ENST00000461127 OR4A15Q8NGL6 344 aa14.87□□□□□ -0.03
TOP3A-202ENST00000461127 OR1K1Q8NGR3 316 aa14.87□□□□□ -0.03
TOP3A-202ENST00000461127 MOAP1Q96BY2 351 aa14.87□□□□□ -0.03
TOP3A-202ENST00000461127 DDIT4LQ96D03 193 aa14.87□□□□□ -0.03
TOP3A-202ENST00000461127 AURKBQ96GD4 344 aaPredicted RBP14.87□□□□□ -0.03
TOP3A-202ENST00000461127 CCDC115Q96NT0 180 aa14.87□□□□□ -0.03
TOP3A-202ENST00000461127 OR7D2Q96RA2 312 aa14.87□□□□□ -0.03
TOP3A-202ENST00000461127 PANX1Q96RD7 426 aa14.87□□□□□ -0.03
TOP3A-202ENST00000461127 TPK1Q9H3S4 243 aa14.87□□□□□ -0.03
TOP3A-202ENST00000461127 DDX28Q9NUL7 540 aaKnown RBP14.87□□□□□ -0.03
TOP3A-202ENST00000461127 NDE1Q9NXR1 346 aa14.87□□□□□ -0.03
TOP3A-202ENST00000461127 BTNL2Q9UIR0 455 aa14.87□□□□□ -0.03
TOP3A-202ENST00000461127 NUP214P35658 2090 aaPredicted RBP14.87□□□□□ -0.03
TOP3A-202ENST00000461127 ARPC4-TTLL3A0A0A6YYG9 625 aa14.86□□□□□ -0.03
TOP3A-202ENST00000461127 DUXAA6NLW8 204 aa14.86□□□□□ -0.03
TOP3A-202ENST00000461127 RFXANKO14593 260 aa14.86□□□□□ -0.03
TOP3A-202ENST00000461127 ANP32DO95626 131 aa14.86□□□□□ -0.03
TOP3A-202ENST00000461127 C6orf47O95873 294 aa14.86□□□□□ -0.03
TOP3A-202ENST00000461127 IGLV1-44P01699 117 aa14.86□□□□□ -0.03
TOP3A-202ENST00000461127 GAAP10253 952 aa14.86□□□□□ -0.03
TOP3A-202ENST00000461127 ANPEPP15144 967 aa14.86□□□□□ -0.03
TOP3A-202ENST00000461127 CCNA2P20248 432 aa14.86□□□□□ -0.03
TOP3A-202ENST00000461127 RYKP34925 604 aa14.86□□□□□ -0.03
TOP3A-202ENST00000461127 TRMT5Q32P41 509 aaKnown RBP14.86□□□□□ -0.03
TOP3A-202ENST00000461127 PAGE3Q5JUK9 113 aa14.86□□□□□ -0.03
TOP3A-202ENST00000461127 PAQR6Q6TCH4 344 aa14.86□□□□□ -0.03
TOP3A-202ENST00000461127 C16orf89Q6UX73 402 aa14.86□□□□□ -0.03
TOP3A-202ENST00000461127 DHDDSQ86SQ9 333 aa14.86□□□□□ -0.03
TOP3A-202ENST00000461127 ADGRG3Q86Y34 549 aa14.86□□□□□ -0.03
TOP3A-202ENST00000461127 CDK20Q8IZL9 346 aa14.86□□□□□ -0.03
TOP3A-202ENST00000461127 CLECL1Q8IZS7 167 aa14.86□□□□□ -0.03
TOP3A-202ENST00000461127 DPP10Q8N608 796 aa14.86□□□□□ -0.03
TOP3A-202ENST00000461127 FAM169BQ8N8A8 192 aa14.86□□□□□ -0.03
TOP3A-202ENST00000461127 SFXN5Q8TD22 340 aa14.86□□□□□ -0.03
TOP3A-202ENST00000461127 OR5P2Q8WZ92 322 aa14.86□□□□□ -0.03
TOP3A-202ENST00000461127 GTF2H4Q92759 462 aa14.86□□□□□ -0.03
TOP3A-202ENST00000461127 PMM1Q92871 262 aa14.86□□□□□ -0.03
TOP3A-202ENST00000461127 ROPN1LQ96C74 230 aa14.86□□□□□ -0.03
TOP3A-202ENST00000461127 TREM2Q9NZC2 230 aa14.86□□□□□ -0.03
TOP3A-202ENST00000461127 SLC35A3Q9Y2D2 325 aa14.86□□□□□ -0.03
TOP3A-202ENST00000461127 LOC105371242A0A075B767 164 aa14.85□□□□□ -0.03
TOP3A-202ENST00000461127 A0A096LPI6 279 aa14.85□□□□□ -0.03
TOP3A-202ENST00000461127 TMEM129A0AVI4 362 aa14.85□□□□□ -0.03
TOP3A-202ENST00000461127 LGI1O95970 557 aa14.85□□□□□ -0.03
TOP3A-202ENST00000461127 NPPAP01160 153 aa14.85□□□□□ -0.03
TOP3A-202ENST00000461127 ACHEP22303 614 aa14.85□□□□□ -0.03
TOP3A-202ENST00000461127 HTR3AP46098 478 aa14.85□□□□□ -0.03
TOP3A-202ENST00000461127 POU3F1Q03052 451 aaPredicted RBP14.85□□□□□ -0.03
TOP3A-202ENST00000461127 HGFACQ04756 655 aa14.85□□□□□ -0.03
TOP3A-202ENST00000461127 HACD2Q6Y1H2 254 aa14.85□□□□□ -0.03
TOP3A-202ENST00000461127 OR9K2Q8NGE7 335 aa14.85□□□□□ -0.03
TOP3A-202ENST00000461127 OR5D16Q8NGK9 328 aa14.85□□□□□ -0.03
TOP3A-202ENST00000461127 PSMA8Q8TAA3 256 aa14.85□□□□□ -0.03
TOP3A-202ENST00000461127 MAGEE2Q8TD90 523 aaPredicted RBP14.85□□□□□ -0.03
TOP3A-202ENST00000461127 SLC6A7Q99884 636 aa14.85□□□□□ -0.03
TOP3A-202ENST00000461127 SF3B5Q9BWJ5 86 aaKnown RBP14.85□□□□□ -0.03
TOP3A-202ENST00000461127 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.85□□□□□ -0.03
TOP3A-202ENST00000461127 MKLN1Q9UL63 735 aa14.85□□□□□ -0.03
TOP3A-202ENST00000461127 CMAHPQ9Y471 501 aa14.85□□□□□ -0.03
TOP3A-202ENST00000461127 OR6C65A6NJZ3 312 aa14.84□□□□□ -0.03
TOP3A-202ENST00000461127 GYG2O15488 501 aa14.84□□□□□ -0.03
TOP3A-202ENST00000461127 SYNGR3O43761 229 aa14.84□□□□□ -0.03
TOP3A-202ENST00000461127 SCN2BO60939 215 aa14.84□□□□□ -0.03
TOP3A-202ENST00000461127 UGT2B17O75795 530 aa14.84□□□□□ -0.03
TOP3A-202ENST00000461127 IGKV3-15P01624 115 aa14.84□□□□□ -0.03
TOP3A-202ENST00000461127 HKR1P10072 659 aa14.84□□□□□ -0.03
TOP3A-202ENST00000461127 HOXB1P14653 301 aaPredicted RBP14.84□□□□□ -0.03
TOP3A-202ENST00000461127 SOAT1P35610 550 aa14.84□□□□□ -0.03
TOP3A-202ENST00000461127 TMEM33P57088 247 aa14.84□□□□□ -0.03
TOP3A-202ENST00000461127 UBA52P62987 128 aaKnown RBP14.84□□□□□ -0.03
TOP3A-202ENST00000461127 TUBA1BP68363 451 aa14.84□□□□□ -0.03
TOP3A-202ENST00000461127 TUBA4AP68366 448 aa14.84□□□□□ -0.03
TOP3A-202ENST00000461127 DNAL1Q4LDG9 190 aa14.84□□□□□ -0.03
TOP3A-202ENST00000461127 ZNF311Q5JNZ3 666 aa14.84□□□□□ -0.03
TOP3A-202ENST00000461127 OTUD3Q5T2D3 398 aaPredicted RBP14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms