RNA–Protein interactions for RNA: ENST00000461041.1

SNAPC3-204, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 2

Gene SNAPC3, Length 403 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-204ENST00000461041 C7orf34Q96L11 122 aa17.67■□□□□ 0.42
SNAPC3-204ENST00000461041 USB1Q9BQ65 265 aaKnown RBP17.67■□□□□ 0.42
SNAPC3-204ENST00000461041 C20orf141Q9NUB4 165 aa17.67■□□□□ 0.42
SNAPC3-204ENST00000461041 NDUFAF4Q9P032 175 aa17.67■□□□□ 0.42
SNAPC3-204ENST00000461041 PRPF19Q9UMS4 504 aaKnown RBP17.67■□□□□ 0.42
SNAPC3-204ENST00000461041 NOX1Q9Y5S8 564 aa17.67■□□□□ 0.42
SNAPC3-204ENST00000461041 APCP25054 2843 aa17.66■□□□□ 0.42
SNAPC3-204ENST00000461041 CIB4A0PJX0 185 aa17.66■□□□□ 0.42
SNAPC3-204ENST00000461041 C11orf98E9PRG8 122 aa17.66■□□□□ 0.42
SNAPC3-204ENST00000461041 hCG_2039718K7EN88 272 aa17.66■□□□□ 0.42
SNAPC3-204ENST00000461041 PIP5K1CO60331 668 aa17.66■□□□□ 0.42
SNAPC3-204ENST00000461041 RAD51DO75771 328 aa17.66■□□□□ 0.42
SNAPC3-204ENST00000461041 PDE5AO76074 875 aa17.66■□□□□ 0.42
SNAPC3-204ENST00000461041 OR7A10O76100 309 aa17.66■□□□□ 0.42
SNAPC3-204ENST00000461041 ZNF432O94892 652 aa17.66■□□□□ 0.42
SNAPC3-204ENST00000461041 OR6A2O95222 327 aa17.66■□□□□ 0.42
SNAPC3-204ENST00000461041 HIST1H2ABP04908 130 aa17.66■□□□□ 0.42
SNAPC3-204ENST00000461041 AHCYP23526 432 aa17.66■□□□□ 0.42
SNAPC3-204ENST00000461041 VLDLRP98155 873 aa17.66■□□□□ 0.42
SNAPC3-204ENST00000461041 LGALS3BPQ08380 585 aa17.66■□□□□ 0.42
SNAPC3-204ENST00000461041 TAB1Q15750 504 aa17.66■□□□□ 0.42
SNAPC3-204ENST00000461041 C9orf135Q5VTT2 229 aa17.66■□□□□ 0.42
SNAPC3-204ENST00000461041 NHLRC1Q6VVB1 395 aa17.66■□□□□ 0.42
SNAPC3-204ENST00000461041 HIST3H2AQ7L7L0 130 aa17.66■□□□□ 0.42
SNAPC3-204ENST00000461041 PXKQ7Z7A4 578 aa17.66■□□□□ 0.42
SNAPC3-204ENST00000461041 CDC20BQ86Y33 519 aa17.66■□□□□ 0.42
SNAPC3-204ENST00000461041 WFDC8Q8IUA0 241 aa17.66■□□□□ 0.42
SNAPC3-204ENST00000461041 HSD17B8Q92506 261 aa17.66■□□□□ 0.42
SNAPC3-204ENST00000461041 HIST1H2ACQ93077 130 aa17.66■□□□□ 0.42
SNAPC3-204ENST00000461041 TAS2R5Q9NYW4 299 aa17.66■□□□□ 0.42
SNAPC3-204ENST00000461041 ACTR3BQ9P1U1 418 aa17.66■□□□□ 0.42
SNAPC3-204ENST00000461041 FAM32AQ9Y421 112 aaKnown RBP17.66■□□□□ 0.42
SNAPC3-204ENST00000461041 OR6C65A6NJZ3 312 aa17.65■□□□□ 0.42
SNAPC3-204ENST00000461041 AKAP8O43823 692 aaKnown RBP17.65■□□□□ 0.42
SNAPC3-204ENST00000461041 SERPINI2O75830 405 aa17.65■□□□□ 0.42
SNAPC3-204ENST00000461041 KRT33AO76009 404 aa17.65■□□□□ 0.42
SNAPC3-204ENST00000461041 SEMG1P04279 462 aa17.65■□□□□ 0.42
SNAPC3-204ENST00000461041 RHCEP18577 417 aa17.65■□□□□ 0.42
SNAPC3-204ENST00000461041 FUT1P19526 365 aa17.65■□□□□ 0.42
SNAPC3-204ENST00000461041 MPGP29372 298 aa17.65■□□□□ 0.42
SNAPC3-204ENST00000461041 LSM11P83369 360 aaKnown RBP eCLIP17.65■□□□□ 0.42
SNAPC3-204ENST00000461041 ZP4Q12836 540 aa17.65■□□□□ 0.42
SNAPC3-204ENST00000461041 STK11Q15831 433 aa17.65■□□□□ 0.42
SNAPC3-204ENST00000461041 ALKBH2Q6NS38 261 aa17.65■□□□□ 0.42
SNAPC3-204ENST00000461041 CYP2R1Q6VVX0 501 aa17.65■□□□□ 0.42
SNAPC3-204ENST00000461041 NANOGNBQ7Z5D8 188 aa17.65■□□□□ 0.42
SNAPC3-204ENST00000461041 PIK3C3Q8NEB9 887 aa17.65■□□□□ 0.42
SNAPC3-204ENST00000461041 PIK3IP1Q96FE7 263 aa17.65■□□□□ 0.42
SNAPC3-204ENST00000461041 OR2M2Q96R28 347 aa17.65■□□□□ 0.42
SNAPC3-204ENST00000461041 LINC00470Q9BZP3 86 aa17.65■□□□□ 0.42
SNAPC3-204ENST00000461041 MUC13Q9H3R2 512 aa17.65■□□□□ 0.42
SNAPC3-204ENST00000461041 NMNAT1Q9HAN9 279 aaPredicted RBP17.65■□□□□ 0.42
SNAPC3-204ENST00000461041 KLF4O43474 513 aa17.64■□□□□ 0.41
SNAPC3-204ENST00000461041 SLC43A1O75387 559 aa17.64■□□□□ 0.41
SNAPC3-204ENST00000461041 UPK3AO75631 287 aa17.64■□□□□ 0.41
SNAPC3-204ENST00000461041 IFI30P13284 250 aa17.64■□□□□ 0.41
SNAPC3-204ENST00000461041 ATP6V1B2P21281 511 aa17.64■□□□□ 0.41
SNAPC3-204ENST00000461041 GABRA6Q16445 453 aa17.64■□□□□ 0.41
SNAPC3-204ENST00000461041 IQCCQ4KMZ1 466 aa17.64■□□□□ 0.41
SNAPC3-204ENST00000461041 TIMM23BQ5SRD1 257 aa17.64■□□□□ 0.41
SNAPC3-204ENST00000461041 ABHD12BQ7Z5M8 362 aaPredicted RBP17.64■□□□□ 0.41
SNAPC3-204ENST00000461041 TMEM123Q8N131 208 aa17.64■□□□□ 0.41
SNAPC3-204ENST00000461041 ANKK1Q8NFD2 765 aa17.64■□□□□ 0.41
SNAPC3-204ENST00000461041 LIPHQ8WWY8 451 aa17.64■□□□□ 0.41
SNAPC3-204ENST00000461041 ACOT11Q8WXI4 607 aaPredicted RBP17.64■□□□□ 0.41
SNAPC3-204ENST00000461041 BPIFA2Q96DR5 249 aa17.64■□□□□ 0.41
SNAPC3-204ENST00000461041 TXNDC15Q96J42 360 aa17.64■□□□□ 0.41
SNAPC3-204ENST00000461041 CLPTM1LQ96KA5 538 aa17.64■□□□□ 0.41
SNAPC3-204ENST00000461041 ALKBH3Q96Q83 286 aaPredicted RBP17.64■□□□□ 0.41
SNAPC3-204ENST00000461041 EMC6Q9BV81 110 aa17.64■□□□□ 0.41
SNAPC3-204ENST00000461041 ANKRD19PQ9H560 264 aa17.64■□□□□ 0.41
SNAPC3-204ENST00000461041 MED29Q9NX70 200 aa17.64■□□□□ 0.41
SNAPC3-204ENST00000461041 ABCA12Q86UK0 2595 aa17.64■□□□□ 0.41
SNAPC3-204ENST00000461041 A0A087WUU8 490 aa17.63■□□□□ 0.41
SNAPC3-204ENST00000461041 HTR3EA5X5Y0 456 aa17.63■□□□□ 0.41
SNAPC3-204ENST00000461041 OR5H1A6NKK0 313 aa17.63■□□□□ 0.41
SNAPC3-204ENST00000461041 ZNF587BE7ETH6 402 aa17.63■□□□□ 0.41
SNAPC3-204ENST00000461041 BLOC1S5-TXNDC5H3BN57 136 aa17.63■□□□□ 0.41
SNAPC3-204ENST00000461041 RNF13O43567 381 aa17.63■□□□□ 0.41
SNAPC3-204ENST00000461041 DIRAS1O95057 198 aa17.63■□□□□ 0.41
SNAPC3-204ENST00000461041 H1F0P07305 194 aaKnown RBP17.63■□□□□ 0.41
SNAPC3-204ENST00000461041 ITGA2P17301 1181 aa17.63■□□□□ 0.41
SNAPC3-204ENST00000461041 LOXP28300 417 aaPredicted RBP17.63■□□□□ 0.41
SNAPC3-204ENST00000461041 MS4A2Q01362 244 aa17.63■□□□□ 0.41
SNAPC3-204ENST00000461041 TGFBR3Q03167 851 aa17.63■□□□□ 0.41
SNAPC3-204ENST00000461041 TRIM25Q14258 630 aaKnown RBP17.63■□□□□ 0.41
SNAPC3-204ENST00000461041 BEX5Q5H9J7 111 aa17.63■□□□□ 0.41
SNAPC3-204ENST00000461041 OR7E24Q6IFN5 339 aa17.63■□□□□ 0.41
SNAPC3-204ENST00000461041 TBPL2Q6SJ96 375 aa17.63■□□□□ 0.41
SNAPC3-204ENST00000461041 ZNF730Q6ZMV8 503 aa17.63■□□□□ 0.41
SNAPC3-204ENST00000461041 LINGO2Q7L985 606 aa17.63■□□□□ 0.41
SNAPC3-204ENST00000461041 P2RY8Q86VZ1 359 aa17.63■□□□□ 0.41
SNAPC3-204ENST00000461041 NRMQ8IXM6 262 aa17.63■□□□□ 0.41
SNAPC3-204ENST00000461041 RNF113BQ8IZP6 322 aaKnown RBP17.63■□□□□ 0.41
SNAPC3-204ENST00000461041 MCUR1Q96AQ8 359 aa17.63■□□□□ 0.41
SNAPC3-204ENST00000461041 MUS81Q96NY9 551 aa17.63■□□□□ 0.41
SNAPC3-204ENST00000461041 THTPAQ9BU02 230 aa17.63■□□□□ 0.41
SNAPC3-204ENST00000461041 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP17.62■□□□□ 0.41
SNAPC3-204ENST00000461041 A0A1W2PPR1 153 aa17.62■□□□□ 0.41
SNAPC3-204ENST00000461041 A0A1W2PRQ8 180 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms