RNA–Protein interactions for RNA: ENST00000459947.5

UBR4-208, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 3,873 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-208ENST00000459947 TIMM23BQ5SRD1 257 aa9.47□□□□□ -0.89
UBR4-208ENST00000459947 CCDC103Q8IW40 242 aa9.47□□□□□ -0.89
UBR4-208ENST00000459947 DNAJC9Q8WXX5 260 aa9.47□□□□□ -0.89
UBR4-208ENST00000459947 SLC7A6OSQ96CW6 309 aaPredicted RBP9.47□□□□□ -0.89
UBR4-208ENST00000459947 ALG12Q9BV10 488 aa9.47□□□□□ -0.89
UBR4-208ENST00000459947 DENND2DQ9H6A0 471 aaPredicted RBP9.47□□□□□ -0.89
UBR4-208ENST00000459947 HIF3AQ9Y2N7 669 aa9.47□□□□□ -0.89
UBR4-208ENST00000459947 DOPEY1Q5JWR5 2465 aa9.47□□□□□ -0.89
UBR4-208ENST00000459947 GSC2O15499 205 aa9.47□□□□□ -0.89
UBR4-208ENST00000459947 PRSS23O95084 383 aa9.47□□□□□ -0.89
UBR4-208ENST00000459947 FCGR1AP12314 374 aa9.47□□□□□ -0.89
UBR4-208ENST00000459947 TNFRSF1BP20333 461 aa9.47□□□□□ -0.89
UBR4-208ENST00000459947 ATP6V1B2P21281 511 aa9.47□□□□□ -0.89
UBR4-208ENST00000459947 GRNP28799 593 aaKnown RBP9.47□□□□□ -0.89
UBR4-208ENST00000459947 NIPAL3Q6P499 406 aa9.47□□□□□ -0.89
UBR4-208ENST00000459947 EPHX4Q8IUS5 362 aa9.47□□□□□ -0.89
UBR4-208ENST00000459947 NKAIN4Q8IVV8 208 aa9.47□□□□□ -0.89
UBR4-208ENST00000459947 NANOS1Q8WY41 292 aaKnown RBP9.47□□□□□ -0.89
UBR4-208ENST00000459947 PRR14Q9BWN1 585 aa9.47□□□□□ -0.89
UBR4-208ENST00000459947 REEP1Q9H902 201 aa9.47□□□□□ -0.89
UBR4-208ENST00000459947 GMPR2Q9P2T1 348 aaKnown RBP9.47□□□□□ -0.89
UBR4-208ENST00000459947 UBR5O95071 2799 aaPredicted RBP9.47□□□□□ -0.89
UBR4-208ENST00000459947 MCIDASD6RGH6 385 aa9.47□□□□□ -0.89
UBR4-208ENST00000459947 RNF13O43567 381 aa9.47□□□□□ -0.89
UBR4-208ENST00000459947 TRAF3IP2O43734 574 aaPredicted RBP9.47□□□□□ -0.89
UBR4-208ENST00000459947 BCL10O95999 233 aa9.47□□□□□ -0.89
UBR4-208ENST00000459947 ADAP00813 363 aa9.47□□□□□ -0.89
UBR4-208ENST00000459947 IGHMP01871 453 aa9.47□□□□□ -0.89
UBR4-208ENST00000459947 C3orf36Q3SXR2 165 aa9.47□□□□□ -0.89
UBR4-208ENST00000459947 GPR139Q6DWJ6 353 aa9.47□□□□□ -0.89
UBR4-208ENST00000459947 SLC46A3Q7Z3Q1 461 aa9.47□□□□□ -0.89
UBR4-208ENST00000459947 GNPDA2Q8TDQ7 276 aa9.47□□□□□ -0.89
UBR4-208ENST00000459947 TMEM255BQ8WV15 326 aa9.47□□□□□ -0.89
UBR4-208ENST00000459947 MGAT4BQ9UQ53 548 aa9.47□□□□□ -0.89
UBR4-208ENST00000459947 MYO18BQ8IUG5 2567 aa9.46□□□□□ -0.89
UBR4-208ENST00000459947 TCRBV5S2A0A599 114 aa9.46□□□□□ -0.89
UBR4-208ENST00000459947 DHRS12A0PJE2 317 aa9.46□□□□□ -0.89
UBR4-208ENST00000459947 SH3PXD2BA1X283 911 aa9.46□□□□□ -0.89
UBR4-208ENST00000459947 PDE5AO76074 875 aa9.46□□□□□ -0.89
UBR4-208ENST00000459947 THY1P04216 161 aa9.46□□□□□ -0.89
UBR4-208ENST00000459947 SAGP10523 405 aaPredicted RBP9.46□□□□□ -0.89
UBR4-208ENST00000459947 GSTM3P21266 225 aa9.46□□□□□ -0.89
UBR4-208ENST00000459947 CSNK1A1P48729 337 aa9.46□□□□□ -0.89
UBR4-208ENST00000459947 EXOC3L2Q2M3D2 409 aa9.46□□□□□ -0.89
UBR4-208ENST00000459947 STAC2Q6ZMT1 411 aa9.46□□□□□ -0.89
UBR4-208ENST00000459947 RSRC1Q96IZ7 334 aaKnown RBP9.46□□□□□ -0.89
UBR4-208ENST00000459947 RAB3IPQ96QF0 476 aaPredicted RBP9.46□□□□□ -0.89
UBR4-208ENST00000459947 WFDC6Q9BQY6 131 aa9.46□□□□□ -0.89
UBR4-208ENST00000459947 CACNA1CQ13936 2221 aa9.46□□□□□ -0.89
UBR4-208ENST00000459947 WDFY3Q8IZQ1 3526 aa9.46□□□□□ -0.9
UBR4-208ENST00000459947 IGHG1P01857 330 aa9.46□□□□□ -0.9
UBR4-208ENST00000459947 TSPAN19P0C672 248 aa9.46□□□□□ -0.9
UBR4-208ENST00000459947 POU3F1Q03052 451 aaPredicted RBP9.46□□□□□ -0.9
UBR4-208ENST00000459947 WDR88Q6ZMY6 472 aa9.46□□□□□ -0.9
UBR4-208ENST00000459947 SLC35D2Q76EJ3 337 aa9.46□□□□□ -0.9
UBR4-208ENST00000459947 CXorf67Q86X51 503 aaPredicted RBP9.46□□□□□ -0.9
UBR4-208ENST00000459947 NRMQ8IXM6 262 aa9.46□□□□□ -0.9
UBR4-208ENST00000459947 ZNF433Q8N7K0 673 aaPredicted RBP9.46□□□□□ -0.9
UBR4-208ENST00000459947 ZIC4Q8N9L1 334 aa9.46□□□□□ -0.9
UBR4-208ENST00000459947 WACQ9BTA9 647 aa9.46□□□□□ -0.9
UBR4-208ENST00000459947 ACTR6Q9GZN1 396 aa9.46□□□□□ -0.9
UBR4-208ENST00000459947 INTS1Q8N201 2190 aaKnown RBP9.46□□□□□ -0.9
UBR4-208ENST00000459947 ARRDC5A6NEK1 342 aa9.46□□□□□ -0.9
UBR4-208ENST00000459947 C19orf84I3L1E1 186 aa9.46□□□□□ -0.9
UBR4-208ENST00000459947 HMGA2P52926 109 aa9.46□□□□□ -0.9
UBR4-208ENST00000459947 TLE4Q04727 773 aa9.46□□□□□ -0.9
UBR4-208ENST00000459947 CDSNQ15517 529 aa9.46□□□□□ -0.9
UBR4-208ENST00000459947 OR6N1Q8NGY5 312 aa9.46□□□□□ -0.9
UBR4-208ENST00000459947 CCDC124Q96CT7 223 aaKnown RBP9.46□□□□□ -0.9
UBR4-208ENST00000459947 MOGAT1Q96PD6 335 aa9.46□□□□□ -0.9
UBR4-208ENST00000459947 MAN2C1Q9NTJ4 1040 aa9.46□□□□□ -0.9
UBR4-208ENST00000459947 B3GAT1Q9P2W7 334 aa9.46□□□□□ -0.9
UBR4-208ENST00000459947 POFUT2Q9Y2G5 429 aa9.46□□□□□ -0.9
UBR4-208ENST00000459947 NBEAQ8NFP9 2946 aa9.46□□□□□ -0.9
UBR4-208ENST00000459947 ZFHX4Q86UP3 3567 aa9.45□□□□□ -0.9
UBR4-208ENST00000459947 A6NNC1 897 aa9.45□□□□□ -0.9
UBR4-208ENST00000459947 MS4A18H0YCH9 400 aa9.45□□□□□ -0.9
UBR4-208ENST00000459947 hCG_2039718K7EN88 272 aa9.45□□□□□ -0.9
UBR4-208ENST00000459947 KPNA4O00629 521 aaPredicted RBP9.45□□□□□ -0.9
UBR4-208ENST00000459947 IMPA2O14732 288 aa9.45□□□□□ -0.9
UBR4-208ENST00000459947 ACOT8O14734 319 aa9.45□□□□□ -0.9
UBR4-208ENST00000459947 APEHP13798 732 aaKnown RBP9.45□□□□□ -0.9
UBR4-208ENST00000459947 AHCYP23526 432 aa9.45□□□□□ -0.9
UBR4-208ENST00000459947 ARHGDIAP52565 204 aa9.45□□□□□ -0.9
UBR4-208ENST00000459947 VLDLRP98155 873 aa9.45□□□□□ -0.9
UBR4-208ENST00000459947 MS4A18Q3C1V0 323 aa9.45□□□□□ -0.9
UBR4-208ENST00000459947 NRN1LQ496H8 165 aa9.45□□□□□ -0.9
UBR4-208ENST00000459947 ZBED5Q49AG3 693 aa9.45□□□□□ -0.9
UBR4-208ENST00000459947 OR2T5Q6IEZ7 315 aa9.45□□□□□ -0.9
UBR4-208ENST00000459947 CYP2R1Q6VVX0 501 aa9.45□□□□□ -0.9
UBR4-208ENST00000459947 SPATA24Q86W54 205 aa9.45□□□□□ -0.9
UBR4-208ENST00000459947 C20orf196Q8IYI0 205 aa9.45□□□□□ -0.9
UBR4-208ENST00000459947 FAM169BQ8N8A8 192 aa9.45□□□□□ -0.9
UBR4-208ENST00000459947 OR2T29Q8NH02 315 aa9.45□□□□□ -0.9
UBR4-208ENST00000459947 RADILQ96JH8 1075 aa9.45□□□□□ -0.9
UBR4-208ENST00000459947 ALPK1Q96QP1 1244 aa9.45□□□□□ -0.9
UBR4-208ENST00000459947 TXNIPQ9H3M7 391 aa9.45□□□□□ -0.9
UBR4-208ENST00000459947 SMURF2Q9HAU4 748 aa9.45□□□□□ -0.9
UBR4-208ENST00000459947 MEPEQ9NQ76 525 aaPredicted RBP9.45□□□□□ -0.9
UBR4-208ENST00000459947 FASNP49327 2511 aaKnown RBP9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms