RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 SHISA6Q6ZSJ9 500 aa15.14■□□□□ 0.01
CCDC43-202ENST00000457422 COX15Q7KZN9 410 aa15.14■□□□□ 0.01
CCDC43-202ENST00000457422 TIGD4Q8IY51 512 aa15.14■□□□□ 0.01
CCDC43-202ENST00000457422 TRIM63Q969Q1 353 aa15.14■□□□□ 0.01
CCDC43-202ENST00000457422 RNF166Q96A37 237 aaPredicted RBP15.14■□□□□ 0.01
CCDC43-202ENST00000457422 TSSK2Q96PF2 358 aa15.14■□□□□ 0.01
CCDC43-202ENST00000457422 OR14A2Q96R54 314 aa15.14■□□□□ 0.01
CCDC43-202ENST00000457422 ELF4Q99607 663 aaPredicted RBP15.14■□□□□ 0.01
CCDC43-202ENST00000457422 PDCD1LG2Q9BQ51 273 aa15.14■□□□□ 0.01
CCDC43-202ENST00000457422 CABIN1Q9Y6J0 2220 aa15.14■□□□□ 0.01
CCDC43-202ENST00000457422 PRR32B1ATL7 298 aa15.13■□□□□ 0.01
CCDC43-202ENST00000457422 PAHP00439 452 aa15.13■□□□□ 0.01
CCDC43-202ENST00000457422 HIST1H2ABP04908 130 aa15.13■□□□□ 0.01
CCDC43-202ENST00000457422 ITPKBP27987 946 aa15.13■□□□□ 0.01
CCDC43-202ENST00000457422 HLA-DMAP28067 261 aa15.13■□□□□ 0.01
CCDC43-202ENST00000457422 NKX2-5P52952 324 aaPredicted RBP15.13■□□□□ 0.01
CCDC43-202ENST00000457422 CLDN20P56880 219 aa15.13■□□□□ 0.01
CCDC43-202ENST00000457422 CBFBQ13951 182 aa15.13■□□□□ 0.01
CCDC43-202ENST00000457422 HACD4Q5VWC8 232 aa15.13■□□□□ 0.01
CCDC43-202ENST00000457422 PYHIN1Q6K0P9 492 aa15.13■□□□□ 0.01
CCDC43-202ENST00000457422 POMZP3Q6PJE2 187 aa15.13■□□□□ 0.01
CCDC43-202ENST00000457422 HIST3H2AQ7L7L0 130 aa15.13■□□□□ 0.01
CCDC43-202ENST00000457422 DTX3Q8N9I9 347 aa15.13■□□□□ 0.01
CCDC43-202ENST00000457422 ZNF511Q8NB15 262 aa15.13■□□□□ 0.01
CCDC43-202ENST00000457422 SLC7A6Q92536 515 aa15.13■□□□□ 0.01
CCDC43-202ENST00000457422 HIST1H2ACQ93077 130 aa15.13■□□□□ 0.01
CCDC43-202ENST00000457422 WACQ9BTA9 647 aa15.13■□□□□ 0.01
CCDC43-202ENST00000457422 IGLV3-12A0A075B6K2 115 aa15.13■□□□□ 0.01
CCDC43-202ENST00000457422 ZNF879B4DU55 563 aa15.13■□□□□ 0.01
CCDC43-202ENST00000457422 H7C1C5 153 aa15.13■□□□□ 0.01
CCDC43-202ENST00000457422 FADS1O60427 444 aa15.13■□□□□ 0.01
CCDC43-202ENST00000457422 FZD7O75084 574 aa15.13■□□□□ 0.01
CCDC43-202ENST00000457422 MT-ATP6P00846 226 aa15.13■□□□□ 0.01
CCDC43-202ENST00000457422 PNLIPP16233 465 aa15.13■□□□□ 0.01
CCDC43-202ENST00000457422 ATF1P18846 271 aa15.13■□□□□ 0.01
CCDC43-202ENST00000457422 ARRB1P49407 418 aaPredicted RBP15.13■□□□□ 0.01
CCDC43-202ENST00000457422 P2RX1P51575 399 aa15.13■□□□□ 0.01
CCDC43-202ENST00000457422 LCN6P62502 163 aa15.13■□□□□ 0.01
CCDC43-202ENST00000457422 MRPL28Q13084 256 aaKnown RBP15.13■□□□□ 0.01
CCDC43-202ENST00000457422 HSD17B12Q53GQ0 312 aa15.13■□□□□ 0.01
CCDC43-202ENST00000457422 YIF1BQ5BJH7 314 aa15.13■□□□□ 0.01
CCDC43-202ENST00000457422 TMEM71Q6P5X7 295 aa15.13■□□□□ 0.01
CCDC43-202ENST00000457422 TMPRSS9Q7Z410 1059 aa15.13■□□□□ 0.01
CCDC43-202ENST00000457422 CDC20BQ86Y33 519 aa15.13■□□□□ 0.01
CCDC43-202ENST00000457422 OR2T4Q8NH00 348 aa15.13■□□□□ 0.01
CCDC43-202ENST00000457422 ITFG2Q969R8 447 aa15.13■□□□□ 0.01
CCDC43-202ENST00000457422 RFT1Q96AA3 541 aa15.13■□□□□ 0.01
CCDC43-202ENST00000457422 DNAJA3Q96EY1 480 aa15.13■□□□□ 0.01
CCDC43-202ENST00000457422 ZNF486Q96H40 463 aaPredicted RBP15.13■□□□□ 0.01
CCDC43-202ENST00000457422 MNTQ99583 582 aa15.13■□□□□ 0.01
CCDC43-202ENST00000457422 SLC22A11Q9NSA0 550 aa15.13■□□□□ 0.01
CCDC43-202ENST00000457422 ITGB1BP2Q9UKP3 347 aa15.13■□□□□ 0.01
CCDC43-202ENST00000457422 ATXN7L1Q9ULK2 861 aaPredicted RBP15.13■□□□□ 0.01
CCDC43-202ENST00000457422 ZNF281Q9Y2X9 895 aa15.13■□□□□ 0.01
CCDC43-202ENST00000457422 MYO15AQ9UKN7 3530 aa15.13■□□□□ 0.01
CCDC43-202ENST00000457422 CACNA1EQ15878 2313 aa15.13■□□□□ 0.01
CCDC43-202ENST00000457422 FAM240BA0A1B0GVZ2 78 aa15.12■□□□□ 0.01
CCDC43-202ENST00000457422 IDSB3KWA1 339 aa15.12■□□□□ 0.01
CCDC43-202ENST00000457422 PSMD9O00233 223 aa15.12■□□□□ 0.01
CCDC43-202ENST00000457422 DCTN6O00399 190 aa15.12■□□□□ 0.01
CCDC43-202ENST00000457422 SCO2O43819 266 aa15.12■□□□□ 0.01
CCDC43-202ENST00000457422 WISP1O95388 367 aa15.12■□□□□ 0.01
CCDC43-202ENST00000457422 NUDT14O95848 222 aa15.12■□□□□ 0.01
CCDC43-202ENST00000457422 PSKH1P11801 424 aa15.12■□□□□ 0.01
CCDC43-202ENST00000457422 GP1BBP13224 206 aa15.12■□□□□ 0.01
CCDC43-202ENST00000457422 EVI2BP34910 448 aa15.12■□□□□ 0.01
CCDC43-202ENST00000457422 NANOS3P60323 173 aaKnown RBP15.12■□□□□ 0.01
CCDC43-202ENST00000457422 SQSTM1Q13501 440 aa15.12■□□□□ 0.01
CCDC43-202ENST00000457422 TBRG1Q3YBR2 411 aa15.12■□□□□ 0.01
CCDC43-202ENST00000457422 SYT9Q86SS6 491 aa15.12■□□□□ 0.01
CCDC43-202ENST00000457422 GLCCI1Q86VQ1 547 aa15.12■□□□□ 0.01
CCDC43-202ENST00000457422 MARVELD1Q9BSK0 173 aa15.12■□□□□ 0.01
CCDC43-202ENST00000457422 THAP7Q9BT49 309 aaPredicted RBP15.12■□□□□ 0.01
CCDC43-202ENST00000457422 PTDSS2Q9BVG9 487 aa15.12■□□□□ 0.01
CCDC43-202ENST00000457422 N6AMT1Q9Y5N5 214 aa15.12■□□□□ 0.01
CCDC43-202ENST00000457422 EXPH5Q8NEV8 1989 aa15.12■□□□□ 0.01
CCDC43-202ENST00000457422 IGHV3-20A0A0C4DH32 117 aa15.12■□□□□ 0.01
CCDC43-202ENST00000457422 OR6C70A6NIJ9 312 aa15.12■□□□□ 0.01
CCDC43-202ENST00000457422 NPIPB7O75200 414 aa15.12■□□□□ 0.01
CCDC43-202ENST00000457422 TMEM127O75204 238 aa15.12■□□□□ 0.01
CCDC43-202ENST00000457422 RENP00797 406 aa15.12■□□□□ 0.01
CCDC43-202ENST00000457422 TACSTD2P09758 323 aa15.12■□□□□ 0.01
CCDC43-202ENST00000457422 NR4A2P43354 598 aa15.12■□□□□ 0.01
CCDC43-202ENST00000457422 POLR2HP52434 150 aaKnown RBP15.12■□□□□ 0.01
CCDC43-202ENST00000457422 EEF1A1P5Q5VTE0 462 aa15.12■□□□□ 0.01
CCDC43-202ENST00000457422 C1QL3Q5VWW1 255 aa15.12■□□□□ 0.01
CCDC43-202ENST00000457422 ZNF57Q68EA5 555 aaPredicted RBP15.12■□□□□ 0.01
CCDC43-202ENST00000457422 RABEPKQ7Z6M1 372 aa15.12■□□□□ 0.01
CCDC43-202ENST00000457422 OR5H6Q8NGV6 325 aa15.12■□□□□ 0.01
CCDC43-202ENST00000457422 CMTM3Q96MX0 182 aa15.12■□□□□ 0.01
CCDC43-202ENST00000457422 SEMA4CQ9C0C4 833 aa15.12■□□□□ 0.01
CCDC43-202ENST00000457422 TAS2R5Q9NYW4 299 aa15.12■□□□□ 0.01
CCDC43-202ENST00000457422 SPATA2Q9UM82 520 aa15.12■□□□□ 0.01
CCDC43-202ENST00000457422 KLHDC2Q9Y2U9 406 aa15.12■□□□□ 0.01
CCDC43-202ENST00000457422 PCNX3Q9H6A9 2034 aa15.11■□□□□ 0.01
CCDC43-202ENST00000457422 A0A1B0GTQ1 180 aa15.11■□□□□ 0.01
CCDC43-202ENST00000457422 A0A1B0GVC2 190 aa15.11■□□□□ 0.01
CCDC43-202ENST00000457422 TMEM72A0PK05 275 aa15.11■□□□□ 0.01
CCDC43-202ENST00000457422 A6NIN4 97 aa15.11■□□□□ 0.01
CCDC43-202ENST00000457422 ADAM10O14672 748 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms