RNA–Protein interactions for RNA: ENST00000454952.1

NIF3L1-209, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-209ENST00000454952 M0R233 179 aa6.94□□□□□ -1.3
NIF3L1-209ENST00000454952 AIM2O14862 343 aa6.94□□□□□ -1.3
NIF3L1-209ENST00000454952 SYNGR3O43761 229 aa6.94□□□□□ -1.3
NIF3L1-209ENST00000454952 TYROBPO43914 113 aa6.94□□□□□ -1.3
NIF3L1-209ENST00000454952 HNRNPCL1O60812 293 aaKnown RBP6.94□□□□□ -1.3
NIF3L1-209ENST00000454952 NPIPB7O75200 414 aa6.94□□□□□ -1.3
NIF3L1-209ENST00000454952 ENTPD5O75356 428 aa6.94□□□□□ -1.3
NIF3L1-209ENST00000454952 UPK3AO75631 287 aa6.94□□□□□ -1.3
NIF3L1-209ENST00000454952 TFP02787 698 aa6.94□□□□□ -1.3
NIF3L1-209ENST00000454952 IL6P05231 212 aa6.94□□□□□ -1.3
NIF3L1-209ENST00000454952 GKN3PP0CG01 181 aa6.94□□□□□ -1.3
NIF3L1-209ENST00000454952 HNRNPCL4P0DMR1 293 aa6.94□□□□□ -1.3
NIF3L1-209ENST00000454952 ITGA2P17301 1181 aa6.94□□□□□ -1.3
NIF3L1-209ENST00000454952 CALCRP30988 508 aa6.94□□□□□ -1.3
NIF3L1-209ENST00000454952 LSP1P33241 339 aa6.94□□□□□ -1.3
NIF3L1-209ENST00000454952 THBS4P35443 961 aa6.94□□□□□ -1.3
NIF3L1-209ENST00000454952 ACAA2P42765 397 aaKnown RBP6.94□□□□□ -1.3
NIF3L1-209ENST00000454952 SLC1A6P48664 564 aa6.94□□□□□ -1.3
NIF3L1-209ENST00000454952 P2RY4P51582 365 aa6.94□□□□□ -1.3
NIF3L1-209ENST00000454952 CLDN17P56750 224 aa6.94□□□□□ -1.3
NIF3L1-209ENST00000454952 ARF1P84077 181 aaKnown RBP6.94□□□□□ -1.3
NIF3L1-209ENST00000454952 IL1RL1Q01638 556 aa6.94□□□□□ -1.3
NIF3L1-209ENST00000454952 HGFACQ04756 655 aa6.94□□□□□ -1.3
NIF3L1-209ENST00000454952 RUNX1T1Q06455 604 aa6.94□□□□□ -1.3
NIF3L1-209ENST00000454952 RIN1Q13671 783 aa6.94□□□□□ -1.3
NIF3L1-209ENST00000454952 DAG1Q14118 895 aa6.94□□□□□ -1.3
NIF3L1-209ENST00000454952 MFSD13AQ14CX5 517 aa6.94□□□□□ -1.3
NIF3L1-209ENST00000454952 ADRM1Q16186 407 aa6.94□□□□□ -1.3
NIF3L1-209ENST00000454952 SLC9B1Q4ZJI4 515 aa6.94□□□□□ -1.3
NIF3L1-209ENST00000454952 ZNF836Q6ZNA1 936 aa6.94□□□□□ -1.3
NIF3L1-209ENST00000454952 NET1Q7Z628 596 aaPredicted RBP6.94□□□□□ -1.3
NIF3L1-209ENST00000454952 ZNF418Q8TF45 676 aaPredicted RBP6.94□□□□□ -1.3
NIF3L1-209ENST00000454952 SLC38A4Q969I6 547 aa6.94□□□□□ -1.3
NIF3L1-209ENST00000454952 TMEM109Q9BVC6 243 aa6.94□□□□□ -1.3
NIF3L1-209ENST00000454952 SPATA9Q9BWV2 254 aa6.94□□□□□ -1.3
NIF3L1-209ENST00000454952 NUF2Q9BZD4 464 aa6.94□□□□□ -1.3
NIF3L1-209ENST00000454952 RAD21L1Q9H4I0 556 aa6.94□□□□□ -1.3
NIF3L1-209ENST00000454952 RMND5AQ9H871 391 aa6.94□□□□□ -1.3
NIF3L1-209ENST00000454952 MEAF6Q9HAF1 191 aa6.94□□□□□ -1.3
NIF3L1-209ENST00000454952 C12orf10Q9HB07 376 aa6.94□□□□□ -1.3
NIF3L1-209ENST00000454952 B3GAT2Q9NPZ5 323 aa6.94□□□□□ -1.3
NIF3L1-209ENST00000454952 AIG1Q9NVV5 245 aa6.94□□□□□ -1.3
NIF3L1-209ENST00000454952 RLIMQ9NVW2 624 aa6.94□□□□□ -1.3
NIF3L1-209ENST00000454952 RPS6KB2Q9UBS0 482 aa6.94□□□□□ -1.3
NIF3L1-209ENST00000454952 GPR160Q9UJ42 338 aa6.94□□□□□ -1.3
NIF3L1-209ENST00000454952 HAO1Q9UJM8 370 aa6.94□□□□□ -1.3
NIF3L1-209ENST00000454952 ZNF346Q9UL40 294 aaKnown RBP6.94□□□□□ -1.3
NIF3L1-209ENST00000454952 ZNF443Q9Y2A4 671 aaPredicted RBP6.94□□□□□ -1.3
NIF3L1-209ENST00000454952 NOX1Q9Y5S8 564 aa6.94□□□□□ -1.3
NIF3L1-209ENST00000454952 DSPPQ9NZW4 1301 aa6.94□□□□□ -1.3
NIF3L1-209ENST00000454952 TRPC5OSA6NMA1 111 aa6.93□□□□□ -1.3
NIF3L1-209ENST00000454952 FTCDNL1E5RQL4 147 aa6.93□□□□□ -1.3
NIF3L1-209ENST00000454952 NR5A2O00482 541 aa6.93□□□□□ -1.3
NIF3L1-209ENST00000454952 ITM2AO43736 263 aa6.93□□□□□ -1.3
NIF3L1-209ENST00000454952 ZNF432O94892 652 aa6.93□□□□□ -1.3
NIF3L1-209ENST00000454952 ANP32DO95626 131 aa6.93□□□□□ -1.3
NIF3L1-209ENST00000454952 ADRA2AP08913 450 aa6.93□□□□□ -1.3
NIF3L1-209ENST00000454952 ZCCHC18P0CG32 403 aa6.93□□□□□ -1.3
NIF3L1-209ENST00000454952 PNMTP11086 282 aa6.93□□□□□ -1.3
NIF3L1-209ENST00000454952 IDO1P14902 403 aa6.93□□□□□ -1.3
NIF3L1-209ENST00000454952 ANPEPP15144 967 aa6.93□□□□□ -1.3
NIF3L1-209ENST00000454952 NR4A1P22736 598 aa6.93□□□□□ -1.3
NIF3L1-209ENST00000454952 VAMP1P23763 118 aa6.93□□□□□ -1.3
NIF3L1-209ENST00000454952 CRATP43155 626 aa6.93□□□□□ -1.3
NIF3L1-209ENST00000454952 CAPZA2P47755 286 aa6.93□□□□□ -1.3
NIF3L1-209ENST00000454952 TMEM33P57088 247 aa6.93□□□□□ -1.3
NIF3L1-209ENST00000454952 DSTNP60981 165 aa6.93□□□□□ -1.3
NIF3L1-209ENST00000454952 UFM1P61960 85 aa6.93□□□□□ -1.3
NIF3L1-209ENST00000454952 TUBA1BP68363 451 aa6.93□□□□□ -1.3
NIF3L1-209ENST00000454952 TUBA4AP68366 448 aa6.93□□□□□ -1.3
NIF3L1-209ENST00000454952 MRPS11P82912 194 aaKnown RBP6.93□□□□□ -1.3
NIF3L1-209ENST00000454952 SRSF2Q01130 221 aaKnown RBP6.93□□□□□ -1.3
NIF3L1-209ENST00000454952 GALK2Q01415 458 aa6.93□□□□□ -1.3
NIF3L1-209ENST00000454952 NPRL3Q12980 569 aa6.93□□□□□ -1.3
NIF3L1-209ENST00000454952 BNIP2Q12982 314 aa6.93□□□□□ -1.3
NIF3L1-209ENST00000454952 STX3Q13277 289 aa6.93□□□□□ -1.3
NIF3L1-209ENST00000454952 SNTB2Q13425 540 aaKnown RBP6.93□□□□□ -1.3
NIF3L1-209ENST00000454952 GSG1Q2KHT4 349 aa6.93□□□□□ -1.3
NIF3L1-209ENST00000454952 TRMT5Q32P41 509 aaKnown RBP6.93□□□□□ -1.3
NIF3L1-209ENST00000454952 MMEL1Q495T6 779 aa6.93□□□□□ -1.3
NIF3L1-209ENST00000454952 FAM69AQ5T7M9 428 aa6.93□□□□□ -1.3
NIF3L1-209ENST00000454952 C6orf89Q6UWU4 347 aa6.93□□□□□ -1.3
NIF3L1-209ENST00000454952 RINLQ6ZS11 566 aa6.93□□□□□ -1.3
NIF3L1-209ENST00000454952 MSANTD1Q6ZTZ1 278 aa6.93□□□□□ -1.3
NIF3L1-209ENST00000454952 TUBA1AQ71U36 451 aa6.93□□□□□ -1.3
NIF3L1-209ENST00000454952 VRK2Q86Y07 508 aa6.93□□□□□ -1.3
NIF3L1-209ENST00000454952 ADPRHL1Q8NDY3 354 aa6.93□□□□□ -1.3
NIF3L1-209ENST00000454952 OR51F2Q8NH61 342 aa6.93□□□□□ -1.3
NIF3L1-209ENST00000454952 PNPT1Q8TCS8 783 aaKnown RBP6.93□□□□□ -1.3
NIF3L1-209ENST00000454952 MGARPQ8TDB4 240 aa6.93□□□□□ -1.3
NIF3L1-209ENST00000454952 SLC38A5Q8WUX1 472 aa6.93□□□□□ -1.3
NIF3L1-209ENST00000454952 DNAJA4Q8WW22 397 aaPredicted RBP6.93□□□□□ -1.3
NIF3L1-209ENST00000454952 MRPL24Q96A35 216 aaKnown RBP6.93□□□□□ -1.3
NIF3L1-209ENST00000454952 SLC25A36Q96CQ1 311 aa6.93□□□□□ -1.3
NIF3L1-209ENST00000454952 ITCHQ96J02 903 aa6.93□□□□□ -1.3
NIF3L1-209ENST00000454952 PKNOX2Q96KN3 472 aa6.93□□□□□ -1.3
NIF3L1-209ENST00000454952 JMJD8Q96S16 334 aa6.93□□□□□ -1.3
NIF3L1-209ENST00000454952 ZNF416Q9BWM5 594 aa6.93□□□□□ -1.3
NIF3L1-209ENST00000454952 NELFAQ9H3P2 528 aa6.93□□□□□ -1.3
NIF3L1-209ENST00000454952 NOX3Q9HBY0 568 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms