RNA–Protein interactions for RNA: ENST00000454850.1

CLCN4-204, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 3

Gene CLCN4, Length 487 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-204ENST00000454850 ZDHHC2Q9UIJ5 367 aa8.48□□□□□ -1.05
CLCN4-204ENST00000454850 RASD1Q9Y272 281 aa8.48□□□□□ -1.05
CLCN4-204ENST00000454850 TANC2Q9HCD6 1990 aa8.48□□□□□ -1.05
CLCN4-204ENST00000454850 AGAP5A6NIR3 686 aa8.47□□□□□ -1.05
CLCN4-204ENST00000454850 A8MVM7 634 aa8.47□□□□□ -1.05
CLCN4-204ENST00000454850 RPL36A-HNRNPH2H7BZ11 118 aa8.47□□□□□ -1.05
CLCN4-204ENST00000454850 M0R3G1 203 aa8.47□□□□□ -1.05
CLCN4-204ENST00000454850 HMGN4O00479 90 aa8.47□□□□□ -1.05
CLCN4-204ENST00000454850 FAAHO00519 579 aa8.47□□□□□ -1.05
CLCN4-204ENST00000454850 RNASET2O00584 256 aaKnown RBP8.47□□□□□ -1.05
CLCN4-204ENST00000454850 GUSBP08236 651 aa8.47□□□□□ -1.05
CLCN4-204ENST00000454850 FGF4P08620 206 aa8.47□□□□□ -1.05
CLCN4-204ENST00000454850 NUDT17P0C025 328 aa8.47□□□□□ -1.05
CLCN4-204ENST00000454850 PNMTP11086 282 aa8.47□□□□□ -1.05
CLCN4-204ENST00000454850 ZNF43P17038 809 aa8.47□□□□□ -1.05
CLCN4-204ENST00000454850 FPR2P25090 351 aa8.47□□□□□ -1.05
CLCN4-204ENST00000454850 GTF2E2P29084 291 aaKnown RBP8.47□□□□□ -1.05
CLCN4-204ENST00000454850 EVX1P49640 407 aa8.47□□□□□ -1.05
CLCN4-204ENST00000454850 GALK2Q01415 458 aa8.47□□□□□ -1.05
CLCN4-204ENST00000454850 GNA13Q14344 377 aa8.47□□□□□ -1.05
CLCN4-204ENST00000454850 NKPD1Q17RQ9 610 aa8.47□□□□□ -1.05
CLCN4-204ENST00000454850 GSG1Q2KHT4 349 aa8.47□□□□□ -1.05
CLCN4-204ENST00000454850 CARD17Q5XLA6 110 aa8.47□□□□□ -1.05
CLCN4-204ENST00000454850 AP1ARQ63HQ0 302 aa8.47□□□□□ -1.05
CLCN4-204ENST00000454850 ATG16L1Q676U5 607 aa8.47□□□□□ -1.05
CLCN4-204ENST00000454850 RBMS3Q6XE24 437 aaKnown RBP8.47□□□□□ -1.05
CLCN4-204ENST00000454850 MGARPQ8TDB4 240 aa8.47□□□□□ -1.05
CLCN4-204ENST00000454850 TAF15Q92804 592 aaKnown RBP eCLIP8.47□□□□□ -1.05
CLCN4-204ENST00000454850 RAB39BQ96DA2 213 aa8.47□□□□□ -1.05
CLCN4-204ENST00000454850 SLC35A5Q9BS91 424 aa8.47□□□□□ -1.05
CLCN4-204ENST00000454850 SLC38A1Q9H2H9 487 aa8.47□□□□□ -1.05
CLCN4-204ENST00000454850 C7orf69Q9H7B7 122 aa8.47□□□□□ -1.05
CLCN4-204ENST00000454850 MID2Q9UJV3 735 aa8.47□□□□□ -1.05
CLCN4-204ENST00000454850 DOCK11Q5JSL3 2073 aa8.47□□□□□ -1.05
CLCN4-204ENST00000454850 DNAJC9-AS1A6NH13 148 aa8.46□□□□□ -1.06
CLCN4-204ENST00000454850 ZNF99A8MXY4 864 aaPredicted RBP8.46□□□□□ -1.06
CLCN4-204ENST00000454850 J3QLI3 93 aa8.46□□□□□ -1.06
CLCN4-204ENST00000454850 NPHS1O60500 1241 aa8.46□□□□□ -1.06
CLCN4-204ENST00000454850 DEAF1O75398 565 aaPredicted RBP8.46□□□□□ -1.06
CLCN4-204ENST00000454850 AHSA1O95433 338 aa8.46□□□□□ -1.06
CLCN4-204ENST00000454850 TFPTP0C1Z6 253 aa8.46□□□□□ -1.06
CLCN4-204ENST00000454850 FAM153BP0C7A2 387 aa8.46□□□□□ -1.06
CLCN4-204ENST00000454850 KRT4P19013 534 aa8.46□□□□□ -1.06
CLCN4-204ENST00000454850 NCF2P19878 526 aaPredicted RBP8.46□□□□□ -1.06
CLCN4-204ENST00000454850 ALDH3A1P30838 453 aa8.46□□□□□ -1.06
CLCN4-204ENST00000454850 GLRXP35754 106 aa8.46□□□□□ -1.06
CLCN4-204ENST00000454850 RPS5P46782 204 aaKnown RBP8.46□□□□□ -1.06
CLCN4-204ENST00000454850 PTDSS1P48651 473 aaKnown RBP8.46□□□□□ -1.06
CLCN4-204ENST00000454850 CLDN8P56748 225 aa8.46□□□□□ -1.06
CLCN4-204ENST00000454850 COPZ1P61923 177 aa8.46□□□□□ -1.06
CLCN4-204ENST00000454850 RPS23P62266 143 aaKnown RBP8.46□□□□□ -1.06
CLCN4-204ENST00000454850 CCL8P80075 99 aa8.46□□□□□ -1.06
CLCN4-204ENST00000454850 MRPS11P82912 194 aaKnown RBP8.46□□□□□ -1.06
CLCN4-204ENST00000454850 C1DQ13901 141 aaKnown RBP8.46□□□□□ -1.06
CLCN4-204ENST00000454850 CHI3L2Q15782 390 aa8.46□□□□□ -1.06
CLCN4-204ENST00000454850 GSTA3Q16772 222 aa8.46□□□□□ -1.06
CLCN4-204ENST00000454850 PHYHD1Q5SRE7 291 aa8.46□□□□□ -1.06
CLCN4-204ENST00000454850 WBP2NLQ6ICG8 309 aa8.46□□□□□ -1.06
CLCN4-204ENST00000454850 RNF130Q86XS8 419 aa8.46□□□□□ -1.06
CLCN4-204ENST00000454850 NEURL3Q96EH8 262 aa8.46□□□□□ -1.06
CLCN4-204ENST00000454850 PPP1R36Q96LQ0 422 aa8.46□□□□□ -1.06
CLCN4-204ENST00000454850 TRNT1Q96Q11 434 aaKnown RBP8.46□□□□□ -1.06
CLCN4-204ENST00000454850 OR51B6Q9H340 312 aa8.46□□□□□ -1.06
CLCN4-204ENST00000454850 NTN4Q9HB63 628 aa8.46□□□□□ -1.06
CLCN4-204ENST00000454850 B3GNT2Q9NY97 397 aa8.46□□□□□ -1.06
CLCN4-204ENST00000454850 NOP53Q9NZM5 478 aaKnown RBP8.46□□□□□ -1.06
CLCN4-204ENST00000454850 ZNF346Q9UL40 294 aaKnown RBP8.46□□□□□ -1.06
CLCN4-204ENST00000454850 RCE1Q9Y256 329 aa8.46□□□□□ -1.06
CLCN4-204ENST00000454850 TPD52L2O43399 206 aaKnown RBP8.45□□□□□ -1.06
CLCN4-204ENST00000454850 RAB36O95755 333 aa8.45□□□□□ -1.06
CLCN4-204ENST00000454850 IGHV2-5P01817 119 aa8.45□□□□□ -1.06
CLCN4-204ENST00000454850 SHBGP04278 402 aa8.45□□□□□ -1.06
CLCN4-204ENST00000454850 DBIP07108 87 aaKnown RBP8.45□□□□□ -1.06
CLCN4-204ENST00000454850 NR2F1P10589 423 aa8.45□□□□□ -1.06
CLCN4-204ENST00000454850 ZNF35P13682 527 aa8.45□□□□□ -1.06
CLCN4-204ENST00000454850 PRG2P13727 222 aa8.45□□□□□ -1.06
CLCN4-204ENST00000454850 B4GALT1P15291 398 aa8.45□□□□□ -1.06
CLCN4-204ENST00000454850 ZNF14P17017 642 aaPredicted RBP8.45□□□□□ -1.06
CLCN4-204ENST00000454850 RPS4Y1P22090 263 aaKnown RBP8.45□□□□□ -1.06
CLCN4-204ENST00000454850 PRTN3P24158 256 aa8.45□□□□□ -1.06
CLCN4-204ENST00000454850 ACAA2P42765 397 aaKnown RBP8.45□□□□□ -1.06
CLCN4-204ENST00000454850 RAD52P43351 418 aa8.45□□□□□ -1.06
CLCN4-204ENST00000454850 AQP5P55064 265 aa8.45□□□□□ -1.06
CLCN4-204ENST00000454850 LCN2P80188 198 aa8.45□□□□□ -1.06
CLCN4-204ENST00000454850 MAD2L1Q13257 205 aaPredicted RBP8.45□□□□□ -1.06
CLCN4-204ENST00000454850 WHAMMP3Q1A5X7 153 aa8.45□□□□□ -1.06
CLCN4-204ENST00000454850 TMEM154Q6P9G4 183 aa8.45□□□□□ -1.06
CLCN4-204ENST00000454850 ZNF813Q6ZN06 617 aa8.45□□□□□ -1.06
CLCN4-204ENST00000454850 ZNF836Q6ZNA1 936 aa8.45□□□□□ -1.06
CLCN4-204ENST00000454850 LRRC74BQ6ZQY2 392 aa8.45□□□□□ -1.06
CLCN4-204ENST00000454850 VRK2Q86Y07 508 aa8.45□□□□□ -1.06
CLCN4-204ENST00000454850 PEX5LQ8IYB4 626 aa8.45□□□□□ -1.06
CLCN4-204ENST00000454850 ZNF440Q8IYI8 595 aa8.45□□□□□ -1.06
CLCN4-204ENST00000454850 PIK3C3Q8NEB9 887 aa8.45□□□□□ -1.06
CLCN4-204ENST00000454850 ANKK1Q8NFD2 765 aa8.45□□□□□ -1.06
CLCN4-204ENST00000454850 PNPT1Q8TCS8 783 aaKnown RBP8.45□□□□□ -1.06
CLCN4-204ENST00000454850 OR2M2Q96R28 347 aa8.45□□□□□ -1.06
CLCN4-204ENST00000454850 ZNF385DQ9H6B1 395 aa8.45□□□□□ -1.06
CLCN4-204ENST00000454850 TAAR3PQ9P1P4 343 aa8.45□□□□□ -1.06
CLCN4-204ENST00000454850 OPN4Q9UHM6 478 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms