RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 H0YAE9 185 aa11.6□□□□□ -0.55
VPS33A-202ENST00000451053 SS18L1O75177 396 aaPredicted RBP11.6□□□□□ -0.55
VPS33A-202ENST00000451053 AGFG2O95081 481 aa11.6□□□□□ -0.55
VPS33A-202ENST00000451053 SNAP29O95721 258 aa11.6□□□□□ -0.55
VPS33A-202ENST00000451053 PLGP00747 810 aaPredicted RBP11.6□□□□□ -0.55
VPS33A-202ENST00000451053 SAGP10523 405 aaPredicted RBP11.6□□□□□ -0.55
VPS33A-202ENST00000451053 OSMP13725 252 aa11.6□□□□□ -0.55
VPS33A-202ENST00000451053 POU2F1P14859 743 aa11.6□□□□□ -0.55
VPS33A-202ENST00000451053 FUT1P19526 365 aa11.6□□□□□ -0.55
VPS33A-202ENST00000451053 MAKP20794 623 aa11.6□□□□□ -0.55
VPS33A-202ENST00000451053 GPR4P46093 362 aa11.6□□□□□ -0.55
VPS33A-202ENST00000451053 GSSP48637 474 aa11.6□□□□□ -0.55
VPS33A-202ENST00000451053 SLC9A3P48764 834 aa11.6□□□□□ -0.55
VPS33A-202ENST00000451053 ESRRGP62508 458 aa11.6□□□□□ -0.55
VPS33A-202ENST00000451053 SIRPAP78324 504 aa11.6□□□□□ -0.55
VPS33A-202ENST00000451053 PMS2P3Q13401 168 aa11.6□□□□□ -0.55
VPS33A-202ENST00000451053 MFSD13AQ14CX5 517 aa11.6□□□□□ -0.55
VPS33A-202ENST00000451053 RNPS1Q15287 305 aaKnown RBP11.6□□□□□ -0.55
VPS33A-202ENST00000451053 CDSNQ15517 529 aa11.6□□□□□ -0.55
VPS33A-202ENST00000451053 HSPB2Q16082 182 aa11.6□□□□□ -0.55
VPS33A-202ENST00000451053 ANKDD1AQ495B1 522 aa11.6□□□□□ -0.55
VPS33A-202ENST00000451053 TTC23Q5W5X9 447 aa11.6□□□□□ -0.55
VPS33A-202ENST00000451053 H1FNTQ75WM6 255 aaPredicted RBP11.6□□□□□ -0.55
VPS33A-202ENST00000451053 LIX1LQ8IVB5 337 aa11.6□□□□□ -0.55
VPS33A-202ENST00000451053 TUSC5Q8IXB3 177 aa11.6□□□□□ -0.55
VPS33A-202ENST00000451053 OR5J2Q8NH18 312 aa11.6□□□□□ -0.55
VPS33A-202ENST00000451053 ZNF775Q96BV0 537 aaPredicted RBP11.6□□□□□ -0.55
VPS33A-202ENST00000451053 GMPPAQ96IJ6 420 aaPredicted RBP11.6□□□□□ -0.55
VPS33A-202ENST00000451053 ZFP3Q96NJ6 502 aa11.6□□□□□ -0.55
VPS33A-202ENST00000451053 NIPSNAP1Q9BPW8 284 aa11.6□□□□□ -0.55
VPS33A-202ENST00000451053 NDEL1Q9GZM8 345 aa11.6□□□□□ -0.55
VPS33A-202ENST00000451053 NANSQ9NR45 359 aa11.6□□□□□ -0.55
VPS33A-202ENST00000451053 MRPL39Q9NYK5 338 aaKnown RBP11.6□□□□□ -0.55
VPS33A-202ENST00000451053 KLHL9Q9P2J3 617 aa11.6□□□□□ -0.55
VPS33A-202ENST00000451053 ZNF229Q9UJW7 825 aa11.6□□□□□ -0.55
VPS33A-202ENST00000451053 CORINQ9Y5Q5 1042 aa11.6□□□□□ -0.55
VPS33A-202ENST00000451053 MED12LQ86YW9 2145 aa11.59□□□□□ -0.55
VPS33A-202ENST00000451053 CLEC18AA5D8T8 446 aa11.59□□□□□ -0.55
VPS33A-202ENST00000451053 UNC119BA6NIH7 251 aa11.59□□□□□ -0.55
VPS33A-202ENST00000451053 PLPP3O14495 311 aa11.59□□□□□ -0.55
VPS33A-202ENST00000451053 CDC42EP2O14613 210 aa11.59□□□□□ -0.55
VPS33A-202ENST00000451053 KLF4O43474 513 aa11.59□□□□□ -0.55
VPS33A-202ENST00000451053 TNFSF13O75888 250 aa11.59□□□□□ -0.55
VPS33A-202ENST00000451053 ASAH2BP0C7U1 165 aa11.59□□□□□ -0.55
VPS33A-202ENST00000451053 CTSSP25774 331 aa11.59□□□□□ -0.55
VPS33A-202ENST00000451053 AGTR1P30556 359 aa11.59□□□□□ -0.55
VPS33A-202ENST00000451053 KIR2DL2P43627 348 aaPredicted RBP11.59□□□□□ -0.55
VPS33A-202ENST00000451053 RPS6KA3P51812 740 aa11.59□□□□□ -0.55
VPS33A-202ENST00000451053 SMSP52788 366 aa11.59□□□□□ -0.55
VPS33A-202ENST00000451053 SLC16A1P53985 500 aa11.59□□□□□ -0.55
VPS33A-202ENST00000451053 SLC17A1Q14916 467 aa11.59□□□□□ -0.55
VPS33A-202ENST00000451053 PDK3Q15120 406 aa11.59□□□□□ -0.55
VPS33A-202ENST00000451053 GTF2IRD2BQ6EKJ0 949 aa11.59□□□□□ -0.55
VPS33A-202ENST00000451053 VWA1Q6PCB0 445 aa11.59□□□□□ -0.55
VPS33A-202ENST00000451053 KLHL17Q6TDP4 642 aa11.59□□□□□ -0.55
VPS33A-202ENST00000451053 CLEC18BQ6UXF7 455 aa11.59□□□□□ -0.55
VPS33A-202ENST00000451053 RASSF6Q6ZTQ3 369 aa11.59□□□□□ -0.55
VPS33A-202ENST00000451053 NANOGNBQ7Z5D8 188 aa11.59□□□□□ -0.55
VPS33A-202ENST00000451053 GALNT5Q7Z7M9 940 aa11.59□□□□□ -0.55
VPS33A-202ENST00000451053 GPAT4Q86UL3 456 aa11.59□□□□□ -0.55
VPS33A-202ENST00000451053 GTF2IRD2Q86UP8 949 aa11.59□□□□□ -0.55
VPS33A-202ENST00000451053 KDM8Q8N371 416 aa11.59□□□□□ -0.55
VPS33A-202ENST00000451053 CLDN22Q8N7P3 220 aa11.59□□□□□ -0.55
VPS33A-202ENST00000451053 CNEP1R1Q8N9A8 125 aa11.59□□□□□ -0.55
VPS33A-202ENST00000451053 SCAIQ8N9R8 606 aa11.59□□□□□ -0.55
VPS33A-202ENST00000451053 CLEC18CQ8NCF0 446 aa11.59□□□□□ -0.55
VPS33A-202ENST00000451053 ADPRHL1Q8NDY3 354 aa11.59□□□□□ -0.55
VPS33A-202ENST00000451053 ITLN2Q8WWU7 325 aaPredicted RBP11.59□□□□□ -0.55
VPS33A-202ENST00000451053 LIPHQ8WWY8 451 aa11.59□□□□□ -0.55
VPS33A-202ENST00000451053 ADI1Q9BV57 179 aa11.59□□□□□ -0.55
VPS33A-202ENST00000451053 TOR3AQ9H497 397 aa11.59□□□□□ -0.55
VPS33A-202ENST00000451053 RIBC2Q9H4K1 309 aa11.59□□□□□ -0.55
VPS33A-202ENST00000451053 BCO1Q9HAY6 547 aa11.59□□□□□ -0.55
VPS33A-202ENST00000451053 GLRX2Q9NS18 164 aa11.59□□□□□ -0.55
VPS33A-202ENST00000451053 B3GAT1Q9P2W7 334 aa11.59□□□□□ -0.55
VPS33A-202ENST00000451053 B3GALT5Q9Y2C3 310 aa11.59□□□□□ -0.55
VPS33A-202ENST00000451053 NCOA6Q14686 2063 aaPredicted RBP11.59□□□□□ -0.55
VPS33A-202ENST00000451053 MYO7BQ6PIF6 2116 aa11.59□□□□□ -0.55
VPS33A-202ENST00000451053 IGKV3D-15A0A087WSY6 115 aa11.58□□□□□ -0.56
VPS33A-202ENST00000451053 MS4A18H0YCH9 400 aa11.58□□□□□ -0.56
VPS33A-202ENST00000451053 H3BN98 237 aa11.58□□□□□ -0.56
VPS33A-202ENST00000451053 DLGAP1O14490 977 aa11.58□□□□□ -0.56
VPS33A-202ENST00000451053 CRHP06850 196 aa11.58□□□□□ -0.56
VPS33A-202ENST00000451053 YES1P07947 543 aa11.58□□□□□ -0.56
VPS33A-202ENST00000451053 ACADSP16219 412 aa11.58□□□□□ -0.56
VPS33A-202ENST00000451053 BMP5P22003 454 aa11.58□□□□□ -0.56
VPS33A-202ENST00000451053 CHRNB4P30926 498 aa11.58□□□□□ -0.56
VPS33A-202ENST00000451053 CAPGP40121 348 aa11.58□□□□□ -0.56
VPS33A-202ENST00000451053 NPRL3Q12980 569 aa11.58□□□□□ -0.56
VPS33A-202ENST00000451053 IL18R1Q13478 541 aa11.58□□□□□ -0.56
VPS33A-202ENST00000451053 FHL1Q13642 323 aa11.58□□□□□ -0.56
VPS33A-202ENST00000451053 MS4A18Q3C1V0 323 aa11.58□□□□□ -0.56
VPS33A-202ENST00000451053 ANKRD34AQ69YU3 496 aa11.58□□□□□ -0.56
VPS33A-202ENST00000451053 TMEM225Q6GV28 225 aa11.58□□□□□ -0.56
VPS33A-202ENST00000451053 FAM214BQ7L5A3 538 aa11.58□□□□□ -0.56
VPS33A-202ENST00000451053 NUFIP2Q7Z417 695 aaKnown RBP11.58□□□□□ -0.56
VPS33A-202ENST00000451053 BTLAQ7Z6A9 289 aa11.58□□□□□ -0.56
VPS33A-202ENST00000451053 MRGPRGQ86SM5 289 aa11.58□□□□□ -0.56
VPS33A-202ENST00000451053 OAFQ86UD1 273 aa11.58□□□□□ -0.56
VPS33A-202ENST00000451053 FAM26EQ8N5C1 309 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms