RNA–Protein interactions for RNA: ENST00000449709.1

HMGB3P8-201, Transcript of high mobility group box 3 pseudogene 8, humanhuman

BASIC

Gene HMGB3P8, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P8-201ENST00000449709 GIMD1P0DJR0 217 aa3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 NQO2P16083 231 aa3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 HLA-GP17693 338 aa3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 CD58P19256 250 aa3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 RAB5AP20339 215 aa3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 IDSP22304 550 aa3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 KDELR1P24390 212 aa3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 ITPKBP27987 946 aa3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 SHC1P29353 583 aa3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 C21orf33P30042 268 aaPredicted RBP3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 BDKRB2P30411 391 aa3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 SDC4P31431 198 aa3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 SDC2P34741 201 aa3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 GLP1RP43220 463 aa3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 ALDH3B1P43353 468 aa3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 RFX3P48380 749 aa3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 STK19P49842 368 aaPredicted RBP3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 SELENOPP49908 381 aa3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 DAPP51397 102 aa3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 SMSP52788 366 aa3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 SLC37A1P57057 533 aa3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 TIRAPP58753 221 aa3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 ARF3P61204 181 aaPredicted RBP3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 STXBP1P61764 594 aaKnown RBP3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 SNRPFP62306 86 aaKnown RBP3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 ARF1P84077 181 aaKnown RBP3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 SLC25A11Q02978 314 aaKnown RBP3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 CHRNB3Q05901 458 aa3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 C17orf67Q0P5P2 114 aa3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 TMEM115Q12893 351 aaPredicted RBP3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 MLLT11Q13015 90 aaPredicted RBP3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 MTAPQ13126 283 aa3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 CRHR2Q13324 411 aa3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 TPBGQ13641 420 aa3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 RUNX2Q13950 521 aa3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 VEZF1Q14119 521 aa3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 PIGHQ14442 188 aaPredicted RBP3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 PTPRCAPQ14761 206 aa3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 SHBQ15464 509 aa3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 MED22Q15528 200 aa3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 SMN1Q16637 294 aaKnown RBP3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 ZNF284Q2VY69 593 aa3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 PCGF3Q3KNV8 242 aa3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 SLC36A2Q495M3 483 aa3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 ZRANB3Q5FWF4 1079 aa3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 TMEM196Q5HYL7 178 aa3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 COA6Q5JTJ3 125 aaKnown RBP3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 SIRPB2Q5JXA9 342 aa3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 ELFN2Q5R3F8 820 aa3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 GCNT6Q5T4J0 391 aa3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 BCL2L15Q5TBC7 163 aa3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 HIST2H3PS2Q5TEC6 136 aa3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 LEMD1Q68G75 181 aa3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 NADSYN1Q6IA69 706 aa3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 OR52W1Q6IF63 320 aa3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 APOBEC3HQ6NTF7 200 aaKnown RBP3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 H3F3CQ6NXT2 135 aa3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 RPUSD3Q6P087 351 aaKnown RBP3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 DNAJC24Q6P3W2 148 aa3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 MTFR2Q6P444 385 aa3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 INO80CQ6PI98 192 aaPredicted RBP3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 PRSS55Q6UWB4 352 aaPredicted RBP3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 CES3Q6UWW8 571 aa3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 ALKAL2Q6UX46 152 aa3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 DRAM2Q6UX65 266 aa3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 LRRN1Q6UXK5 716 aa3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 UNQ9370/PRO34162Q6UXP9 181 aa3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 FBXW12Q6X9E4 464 aa3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 IL34Q6ZMJ4 242 aa3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 ZNF620Q6ZNG0 422 aa3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 ZNF720Q7Z2F6 126 aa3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 C6orf120Q7Z4R8 191 aa3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 TMCO2Q7Z6W1 182 aaPredicted RBP3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 ADGRA1Q86SQ6 560 aa3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 LINC01551Q86U37 167 aa3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 TMEM200AQ86VY9 491 aa3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 PARGQ86W56 976 aa3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 UNC93AQ86WB7 457 aa3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 WDFY1Q8IWB7 410 aa3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 SLC34A3Q8N130 599 aa3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 ZNF664Q8N3J9 261 aa3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 FSTL5Q8N475 847 aaPredicted RBP3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 ZBTB2Q8N680 514 aa3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 C12orf76Q8N812 135 aaPredicted RBP3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 C11orf44Q8N8P7 122 aa3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 UBAC2Q8NBM4 344 aa3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 ACBD4Q8NC06 268 aa3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 FAM98AQ8NCA5 519 aaKnown RBP3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 HJURPQ8NCD3 748 aaPredicted RBP3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 SDR9C7Q8NEX9 313 aa3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 BBS1Q8NFJ9 593 aa3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 BEST4Q8NFU0 473 aa3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 SEMA6DQ8NFY4 1073 aa3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 OR5T3Q8NGG3 340 aa3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 OR5D18Q8NGL1 313 aa3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 OR10K1Q8NGX5 313 aa3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 OR4Q3Q8NH05 313 aa3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 OR10A6Q8NH74 314 aa3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 COQ8AQ8NI60 647 aa3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 SLC2A12Q8TD20 617 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms