RNA–Protein interactions for RNA: ENST00000449704.5

TOP3B-211, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-211ENST00000449704 POU3F1Q03052 451 aaPredicted RBP13.86□□□□□ -0.19
TOP3B-211ENST00000449704 LGALS3BPQ08380 585 aa13.86□□□□□ -0.19
TOP3B-211ENST00000449704 SLC46A3Q7Z3Q1 461 aa13.86□□□□□ -0.19
TOP3B-211ENST00000449704 ZNF433Q8N7K0 673 aaPredicted RBP13.86□□□□□ -0.19
TOP3B-211ENST00000449704 POMGNT2Q8NAT1 580 aa13.86□□□□□ -0.19
TOP3B-211ENST00000449704 MCUR1Q96AQ8 359 aa13.86□□□□□ -0.19
TOP3B-211ENST00000449704 CLPTM1LQ96KA5 538 aa13.86□□□□□ -0.19
TOP3B-211ENST00000449704 C7orf34Q96L11 122 aa13.86□□□□□ -0.19
TOP3B-211ENST00000449704 LURAP1Q96LR2 239 aa13.86□□□□□ -0.19
TOP3B-211ENST00000449704 CLEC4MQ9H2X3 399 aaPredicted RBP13.86□□□□□ -0.19
TOP3B-211ENST00000449704 NMNAT1Q9HAN9 279 aaPredicted RBP13.86□□□□□ -0.19
TOP3B-211ENST00000449704 MAN2C1Q9NTJ4 1040 aa13.86□□□□□ -0.19
TOP3B-211ENST00000449704 NDUFAF4Q9P032 175 aa13.86□□□□□ -0.19
TOP3B-211ENST00000449704 ACTR3BQ9P1U1 418 aa13.86□□□□□ -0.19
TOP3B-211ENST00000449704 MALT1Q9UDY8 824 aa13.86□□□□□ -0.19
TOP3B-211ENST00000449704 NOX1Q9Y5S8 564 aa13.86□□□□□ -0.19
TOP3B-211ENST00000449704 DCHS2Q6V1P9 2916 aa13.86□□□□□ -0.19
TOP3B-211ENST00000449704 FREM1Q5H8C1 2179 aa13.85□□□□□ -0.19
TOP3B-211ENST00000449704 BLOC1S5-TXNDC5H3BN57 136 aa13.85□□□□□ -0.19
TOP3B-211ENST00000449704 RNF13O43567 381 aa13.85□□□□□ -0.19
TOP3B-211ENST00000449704 TRAF3IP2O43734 574 aaPredicted RBP13.85□□□□□ -0.19
TOP3B-211ENST00000449704 AKAP8O43823 692 aaKnown RBP13.85□□□□□ -0.19
TOP3B-211ENST00000449704 SLC43A1O75387 559 aa13.85□□□□□ -0.19
TOP3B-211ENST00000449704 RAD51DO75771 328 aa13.85□□□□□ -0.19
TOP3B-211ENST00000449704 OR7A10O76100 309 aa13.85□□□□□ -0.19
TOP3B-211ENST00000449704 DIRAS1O95057 198 aa13.85□□□□□ -0.19
TOP3B-211ENST00000449704 PRSS23O95084 383 aa13.85□□□□□ -0.19
TOP3B-211ENST00000449704 ASAH2BP0C7U1 165 aa13.85□□□□□ -0.19
TOP3B-211ENST00000449704 IFI30P13284 250 aa13.85□□□□□ -0.19
TOP3B-211ENST00000449704 RHCEP18577 417 aa13.85□□□□□ -0.19
TOP3B-211ENST00000449704 CDH2P19022 906 aaPredicted RBP13.85□□□□□ -0.19
TOP3B-211ENST00000449704 COX5AP20674 150 aa13.85□□□□□ -0.19
TOP3B-211ENST00000449704 ATP6V1B2P21281 511 aa13.85□□□□□ -0.19
TOP3B-211ENST00000449704 CRYGSP22914 178 aa13.85□□□□□ -0.19
TOP3B-211ENST00000449704 FOXG1P55316 489 aaPredicted RBP13.85□□□□□ -0.19
TOP3B-211ENST00000449704 LSM11P83369 360 aaKnown RBP eCLIP13.85□□□□□ -0.194e-6■■■■□ 19.9
TOP3B-211ENST00000449704 VLDLRP98155 873 aa13.85□□□□□ -0.19
TOP3B-211ENST00000449704 TRIM25Q14258 630 aaKnown RBP13.85□□□□□ -0.19
TOP3B-211ENST00000449704 CARD17Q5XLA6 110 aa13.85□□□□□ -0.19
TOP3B-211ENST00000449704 TBPL2Q6SJ96 375 aa13.85□□□□□ -0.19
TOP3B-211ENST00000449704 ZNF730Q6ZMV8 503 aa13.85□□□□□ -0.19
TOP3B-211ENST00000449704 RRM2BQ7LG56 351 aa13.85□□□□□ -0.19
TOP3B-211ENST00000449704 NANOGNBQ7Z5D8 188 aa13.85□□□□□ -0.19
TOP3B-211ENST00000449704 PXKQ7Z7A4 578 aa13.85□□□□□ -0.19
TOP3B-211ENST00000449704 DHFR2Q86XF0 187 aa13.85□□□□□ -0.19
TOP3B-211ENST00000449704 MEX3DQ86XN8 651 aaKnown RBP13.85□□□□□ -0.19
TOP3B-211ENST00000449704 NRMQ8IXM6 262 aa13.85□□□□□ -0.19
TOP3B-211ENST00000449704 HSD17B8Q92506 261 aa13.85□□□□□ -0.19
TOP3B-211ENST00000449704 CCDC124Q96CT7 223 aaKnown RBP13.85□□□□□ -0.19
TOP3B-211ENST00000449704 PIK3IP1Q96FE7 263 aa13.85□□□□□ -0.19
TOP3B-211ENST00000449704 TXNDC15Q96J42 360 aa13.85□□□□□ -0.19
TOP3B-211ENST00000449704 EMC6Q9BV81 110 aa13.85□□□□□ -0.19
TOP3B-211ENST00000449704 MUC13Q9H3R2 512 aa13.85□□□□□ -0.19
TOP3B-211ENST00000449704 TAS2R16Q9NYV7 291 aa13.85□□□□□ -0.19
TOP3B-211ENST00000449704 TAS2R5Q9NYW4 299 aa13.85□□□□□ -0.19
TOP3B-211ENST00000449704 RCE1Q9Y256 329 aa13.85□□□□□ -0.19
TOP3B-211ENST00000449704 FBN2P35556 2912 aa13.84□□□□□ -0.19
TOP3B-211ENST00000449704 FAM221AA4D161 298 aa13.84□□□□□ -0.19
TOP3B-211ENST00000449704 OR6C65A6NJZ3 312 aa13.84□□□□□ -0.19
TOP3B-211ENST00000449704 UPK3AO75631 287 aa13.84□□□□□ -0.19
TOP3B-211ENST00000449704 H1F0P07305 194 aaKnown RBP13.84□□□□□ -0.19
TOP3B-211ENST00000449704 ITGA5P08648 1049 aa13.84□□□□□ -0.19
TOP3B-211ENST00000449704 ITGA2P17301 1181 aa13.84□□□□□ -0.19
TOP3B-211ENST00000449704 MPGP29372 298 aa13.84□□□□□ -0.19
TOP3B-211ENST00000449704 MS4A2Q01362 244 aa13.84□□□□□ -0.19
TOP3B-211ENST00000449704 DNAL1Q4LDG9 190 aa13.84□□□□□ -0.19
TOP3B-211ENST00000449704 FGD3Q5JSP0 725 aa13.84□□□□□ -0.19
TOP3B-211ENST00000449704 ABHD12BQ7Z5M8 362 aaPredicted RBP13.84□□□□□ -0.19
TOP3B-211ENST00000449704 PIK3C3Q8NEB9 887 aa13.84□□□□□ -0.19
TOP3B-211ENST00000449704 ANKK1Q8NFD2 765 aa13.84□□□□□ -0.19
TOP3B-211ENST00000449704 OR52J3Q8NH60 311 aa13.84□□□□□ -0.19
TOP3B-211ENST00000449704 ACOT11Q8WXI4 607 aaPredicted RBP13.84□□□□□ -0.19
TOP3B-211ENST00000449704 BPIFA2Q96DR5 249 aa13.84□□□□□ -0.19
TOP3B-211ENST00000449704 SEPHS2Q99611 448 aa13.84□□□□□ -0.19
TOP3B-211ENST00000449704 PIP5K1AQ99755 562 aa13.84□□□□□ -0.19
TOP3B-211ENST00000449704 USB1Q9BQ65 265 aaKnown RBP13.84□□□□□ -0.19
TOP3B-211ENST00000449704 MED29Q9NX70 200 aa13.84□□□□□ -0.19
TOP3B-211ENST00000449704 ABCA4P78363 2273 aa13.84□□□□□ -0.19
TOP3B-211ENST00000449704 APCP25054 2843 aa13.83□□□□□ -0.19
TOP3B-211ENST00000449704 SPG11Q96JI7 2443 aa13.83□□□□□ -0.19
TOP3B-211ENST00000449704 A0A087WUU8 490 aa13.83□□□□□ -0.2
TOP3B-211ENST00000449704 SLC35F4A4IF30 521 aa13.83□□□□□ -0.2
TOP3B-211ENST00000449704 ZNF726A6NNF4 738 aa13.83□□□□□ -0.2
TOP3B-211ENST00000449704 DEFB108AA8MXU0 73 aa13.83□□□□□ -0.2
TOP3B-211ENST00000449704 ZNF587BE7ETH6 402 aa13.83□□□□□ -0.2
TOP3B-211ENST00000449704 PDLIM1O00151 329 aa13.83□□□□□ -0.2
TOP3B-211ENST00000449704 ZNF432O94892 652 aa13.83□□□□□ -0.2
TOP3B-211ENST00000449704 GOSR1O95249 250 aa13.83□□□□□ -0.2
TOP3B-211ENST00000449704 STAMBPO95630 424 aa13.83□□□□□ -0.2
TOP3B-211ENST00000449704 IGF2P01344 180 aa13.83□□□□□ -0.2
TOP3B-211ENST00000449704 HRGP04196 525 aa13.83□□□□□ -0.2
TOP3B-211ENST00000449704 SEMG1P04279 462 aa13.83□□□□□ -0.2
TOP3B-211ENST00000449704 FABP3P05413 133 aa13.83□□□□□ -0.2
TOP3B-211ENST00000449704 IFNGR1P15260 489 aa13.83□□□□□ -0.2
TOP3B-211ENST00000449704 TGFBR3Q03167 851 aa13.83□□□□□ -0.2
TOP3B-211ENST00000449704 ZP4Q12836 540 aa13.83□□□□□ -0.2
TOP3B-211ENST00000449704 CAMK2DQ13557 499 aa13.83□□□□□ -0.2
TOP3B-211ENST00000449704 TAB1Q15750 504 aa13.83□□□□□ -0.2
TOP3B-211ENST00000449704 MTX3Q5HYI7 312 aa13.83□□□□□ -0.2
TOP3B-211ENST00000449704 HMBOX1Q6NT76 420 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms