RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 MICU2Q8IYU8 434 aa12.32□□□□□ -0.44
RTFDC1-204ENST00000449062 KBTBD8Q8NFY9 601 aa12.32□□□□□ -0.44
RTFDC1-204ENST00000449062 VANGL1Q8TAA9 524 aaPredicted RBP12.32□□□□□ -0.44
RTFDC1-204ENST00000449062 ZNF837Q96EG3 531 aaPredicted RBP12.32□□□□□ -0.44
RTFDC1-204ENST00000449062 TXNDC15Q96J42 360 aa12.32□□□□□ -0.44
RTFDC1-204ENST00000449062 MPP4Q96JB8 637 aa12.32□□□□□ -0.44
RTFDC1-204ENST00000449062 OR2M2Q96R28 347 aa12.32□□□□□ -0.44
RTFDC1-204ENST00000449062 CCL19Q99731 98 aa12.32□□□□□ -0.44
RTFDC1-204ENST00000449062 NELFAQ9H3P2 528 aa12.32□□□□□ -0.44
RTFDC1-204ENST00000449062 MEPEQ9NQ76 525 aaPredicted RBP12.32□□□□□ -0.44
RTFDC1-204ENST00000449062 TAS2R5Q9NYW4 299 aa12.32□□□□□ -0.44
RTFDC1-204ENST00000449062 SELENONQ9NZV5 590 aa12.32□□□□□ -0.44
RTFDC1-204ENST00000449062 BAG5Q9UL15 447 aa12.32□□□□□ -0.44
RTFDC1-204ENST00000449062 SH3GLB1Q9Y371 365 aa12.32□□□□□ -0.44
RTFDC1-204ENST00000449062 HEATR1Q9H583 2144 aaKnown RBP12.31□□□□□ -0.44
RTFDC1-204ENST00000449062 ELOVL7A1L3X0 281 aa12.31□□□□□ -0.44
RTFDC1-204ENST00000449062 NME4O00746 187 aa12.31□□□□□ -0.44
RTFDC1-204ENST00000449062 CLOCKO15516 846 aa12.31□□□□□ -0.44
RTFDC1-204ENST00000449062 MT-ATP6P00846 226 aa12.31□□□□□ -0.44
RTFDC1-204ENST00000449062 FOSL1P15407 271 aa12.31□□□□□ -0.44
RTFDC1-204ENST00000449062 PTNP21246 168 aa12.31□□□□□ -0.44
RTFDC1-204ENST00000449062 PTAFRP25105 342 aa12.31□□□□□ -0.44
RTFDC1-204ENST00000449062 CD40P25942 277 aa12.31□□□□□ -0.44
RTFDC1-204ENST00000449062 LSP1P33241 339 aa12.31□□□□□ -0.44
RTFDC1-204ENST00000449062 ZNF83P51522 516 aa12.31□□□□□ -0.44
RTFDC1-204ENST00000449062 GYS2P54840 703 aa12.31□□□□□ -0.44
RTFDC1-204ENST00000449062 ZP4Q12836 540 aa12.31□□□□□ -0.44
RTFDC1-204ENST00000449062 ZNF74Q16587 644 aa12.31□□□□□ -0.44
RTFDC1-204ENST00000449062 HIKESHIQ53FT3 197 aa12.31□□□□□ -0.44
RTFDC1-204ENST00000449062 CYBRD1Q53TN4 286 aa12.31□□□□□ -0.44
RTFDC1-204ENST00000449062 PXKQ7Z7A4 578 aa12.31□□□□□ -0.44
RTFDC1-204ENST00000449062 PIGWQ7Z7B1 504 aa12.31□□□□□ -0.44
RTFDC1-204ENST00000449062 OR2T12Q8NG77 320 aa12.31□□□□□ -0.44
RTFDC1-204ENST00000449062 OR1K1Q8NGR3 316 aa12.31□□□□□ -0.44
RTFDC1-204ENST00000449062 MAGEE2Q8TD90 523 aaPredicted RBP12.31□□□□□ -0.44
RTFDC1-204ENST00000449062 SLC26A7Q8TE54 656 aa12.31□□□□□ -0.44
RTFDC1-204ENST00000449062 SMAP2Q8WU79 429 aaPredicted RBP12.31□□□□□ -0.44
RTFDC1-204ENST00000449062 HOPXQ9BPY8 73 aaPredicted RBP12.31□□□□□ -0.44
RTFDC1-204ENST00000449062 C1QTNF6Q9BXI9 259 aa12.31□□□□□ -0.44
RTFDC1-204ENST00000449062 SLC19A3Q9BZV2 496 aa12.31□□□□□ -0.44
RTFDC1-204ENST00000449062 GRIP2Q9C0E4 1043 aa12.31□□□□□ -0.44
RTFDC1-204ENST00000449062 EFCAB1Q9HAE3 211 aa12.31□□□□□ -0.44
RTFDC1-204ENST00000449062 SLC7A7Q9UM01 511 aa12.31□□□□□ -0.44
RTFDC1-204ENST00000449062 AP3M1Q9Y2T2 418 aa12.31□□□□□ -0.44
RTFDC1-204ENST00000449062 RTTNQ86VV8 2226 aa12.3□□□□□ -0.44
RTFDC1-204ENST00000449062 GMNCA6NCL1 334 aa12.3□□□□□ -0.44
RTFDC1-204ENST00000449062 E7EQL1 145 aa12.3□□□□□ -0.44
RTFDC1-204ENST00000449062 ABCD4O14678 606 aa12.3□□□□□ -0.44
RTFDC1-204ENST00000449062 IFNA14P01570 189 aa12.3□□□□□ -0.44
RTFDC1-204ENST00000449062 FUT4P22083 530 aa12.3□□□□□ -0.44
RTFDC1-204ENST00000449062 OR1E2P47887 323 aa12.3□□□□□ -0.44
RTFDC1-204ENST00000449062 SELENOWP63302 87 aa12.3□□□□□ -0.44
RTFDC1-204ENST00000449062 LIPEQ05469 1076 aa12.3□□□□□ -0.44
RTFDC1-204ENST00000449062 PMS2P3Q13401 168 aa12.3□□□□□ -0.44
RTFDC1-204ENST00000449062 PIN1Q13526 163 aaPredicted RBP12.3□□□□□ -0.44
RTFDC1-204ENST00000449062 C1DQ13901 141 aaKnown RBP12.3□□□□□ -0.44
RTFDC1-204ENST00000449062 TBRG1Q3YBR2 411 aa12.3□□□□□ -0.44
RTFDC1-204ENST00000449062 PHYHD1Q5SRE7 291 aa12.3□□□□□ -0.44
RTFDC1-204ENST00000449062 TMEM108Q6UXF1 575 aa12.3□□□□□ -0.44
RTFDC1-204ENST00000449062 ARPINQ7Z6K5 226 aa12.3□□□□□ -0.44
RTFDC1-204ENST00000449062 NKAIN4Q8IVV8 208 aa12.3□□□□□ -0.44
RTFDC1-204ENST00000449062 C20orf196Q8IYI0 205 aa12.3□□□□□ -0.44
RTFDC1-204ENST00000449062 LRRC17Q8N6Y2 441 aa12.3□□□□□ -0.44
RTFDC1-204ENST00000449062 RNF217Q8TC41 542 aa12.3□□□□□ -0.44
RTFDC1-204ENST00000449062 PROX1Q92786 737 aa12.3□□□□□ -0.44
RTFDC1-204ENST00000449062 RADILQ96JH8 1075 aa12.3□□□□□ -0.44
RTFDC1-204ENST00000449062 LRR1Q96L50 414 aa12.3□□□□□ -0.44
RTFDC1-204ENST00000449062 GPR35Q9HC97 309 aa12.3□□□□□ -0.44
RTFDC1-204ENST00000449062 CISD1Q9NZ45 108 aaKnown RBP12.3□□□□□ -0.44
RTFDC1-204ENST00000449062 RIMS3Q9UJD0 308 aa12.3□□□□□ -0.44
RTFDC1-204ENST00000449062 MGAT4BQ9UQ53 548 aa12.3□□□□□ -0.44
RTFDC1-204ENST00000449062 LAMP3Q9UQV4 416 aa12.3□□□□□ -0.44
RTFDC1-204ENST00000449062 AMDHD2Q9Y303 409 aa12.3□□□□□ -0.44
RTFDC1-204ENST00000449062 NOX1Q9Y5S8 564 aa12.3□□□□□ -0.44
RTFDC1-204ENST00000449062 JMJD1CQ15652 2540 aa12.29□□□□□ -0.44
RTFDC1-204ENST00000449062 ARPC4-TTLL3A0A0A6YYG9 625 aa12.29□□□□□ -0.44
RTFDC1-204ENST00000449062 ZNF587BE7ETH6 402 aa12.29□□□□□ -0.44
RTFDC1-204ENST00000449062 ARHGEF9O43307 516 aa12.29□□□□□ -0.44
RTFDC1-204ENST00000449062 SHOX2O60902 331 aaPredicted RBP12.29□□□□□ -0.44
RTFDC1-204ENST00000449062 SLC43A1O75387 559 aa12.29□□□□□ -0.44
RTFDC1-204ENST00000449062 OR5F1O95221 314 aa12.29□□□□□ -0.44
RTFDC1-204ENST00000449062 CH25HO95992 272 aa12.29□□□□□ -0.44
RTFDC1-204ENST00000449062 IGF2P01344 180 aa12.29□□□□□ -0.44
RTFDC1-204ENST00000449062 TSPAN19P0C672 248 aa12.29□□□□□ -0.44
RTFDC1-204ENST00000449062 ASAH2BP0C7U1 165 aa12.29□□□□□ -0.44
RTFDC1-204ENST00000449062 HOXB1P14653 301 aaPredicted RBP12.29□□□□□ -0.44
RTFDC1-204ENST00000449062 GTF2E2P29084 291 aaKnown RBP12.29□□□□□ -0.44
RTFDC1-204ENST00000449062 PTH2RP49190 550 aa12.29□□□□□ -0.44
RTFDC1-204ENST00000449062 SLC7A2P52569 658 aa12.29□□□□□ -0.44
RTFDC1-204ENST00000449062 PRPS1P60891 318 aa12.29□□□□□ -0.44
RTFDC1-204ENST00000449062 ARF1P84077 181 aaKnown RBP12.29□□□□□ -0.44
RTFDC1-204ENST00000449062 ROR2Q01974 943 aaKnown RBP12.29□□□□□ -0.44
RTFDC1-204ENST00000449062 PUDPQ08623 228 aa12.29□□□□□ -0.44
RTFDC1-204ENST00000449062 SPOCK1Q08629 439 aa12.29□□□□□ -0.44
RTFDC1-204ENST00000449062 ANKRD16Q6P6B7 361 aa12.29□□□□□ -0.44
RTFDC1-204ENST00000449062 TTC33Q6PID6 262 aaPredicted RBP12.29□□□□□ -0.44
RTFDC1-204ENST00000449062 SLC46A3Q7Z3Q1 461 aa12.29□□□□□ -0.44
RTFDC1-204ENST00000449062 ABHD12BQ7Z5M8 362 aaPredicted RBP12.29□□□□□ -0.44
RTFDC1-204ENST00000449062 TSEN54Q7Z6J9 526 aaKnown RBP12.29□□□□□ -0.44
RTFDC1-204ENST00000449062 DTX2Q86UW9 622 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms