RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 DYRK1AQ13627 763 aa15.32■□□□□ 0.04
TCOF1-206ENST00000445265 CDK5R1Q15078 307 aa15.32■□□□□ 0.04
TCOF1-206ENST00000445265 DOCK3Q8IZD9 2030 aa15.32■□□□□ 0.04
TCOF1-206ENST00000445265 BPIFB2Q8N4F0 458 aa15.32■□□□□ 0.04
TCOF1-206ENST00000445265 SLC6A17Q9H1V8 727 aa15.32■□□□□ 0.04
TCOF1-206ENST00000445265 ACOXLQ9NUZ1 547 aa15.32■□□□□ 0.04
TCOF1-206ENST00000445265 REV1Q9UBZ9 1251 aa15.32■□□□□ 0.04
TCOF1-206ENST00000445265 HS3ST3A1Q9Y663 406 aa15.32■□□□□ 0.04
TCOF1-206ENST00000445265 HCRTR1O43613 425 aa15.32■□□□□ 0.04
TCOF1-206ENST00000445265 SDC3O75056 442 aa15.32■□□□□ 0.04
TCOF1-206ENST00000445265 EIF4EP06730 217 aaKnown RBP15.32■□□□□ 0.04
TCOF1-206ENST00000445265 NDUFAF7Q7L592 441 aa15.32■□□□□ 0.04
TCOF1-206ENST00000445265 ZNF546Q86UE3 836 aa15.32■□□□□ 0.04
TCOF1-206ENST00000445265 FAM174AQ8TBP5 190 aa15.32■□□□□ 0.04
TCOF1-206ENST00000445265 LCORQ96JN0 433 aaPredicted RBP15.32■□□□□ 0.04
TCOF1-206ENST00000445265 ZC3H10Q96K80 434 aaKnown RBP15.32■□□□□ 0.04
TCOF1-206ENST00000445265 ZNF304Q9HCX3 659 aa15.32■□□□□ 0.04
TCOF1-206ENST00000445265 CYSLTR2Q9NS75 346 aa15.32■□□□□ 0.04
TCOF1-206ENST00000445265 STEAP1Q9UHE8 339 aa15.32■□□□□ 0.04
TCOF1-206ENST00000445265 RARRES3Q9UL19 164 aa15.32■□□□□ 0.04
TCOF1-206ENST00000445265 TRAV36DV7A0A075B6V5 113 aa15.31■□□□□ 0.04
TCOF1-206ENST00000445265 TMEM82A0PJX8 343 aa15.31■□□□□ 0.04
TCOF1-206ENST00000445265 UTS2O95399 124 aa15.31■□□□□ 0.04
TCOF1-206ENST00000445265 CFIP05156 583 aa15.31■□□□□ 0.04
TCOF1-206ENST00000445265 HSD17B7P56937 341 aa15.31■□□□□ 0.04
TCOF1-206ENST00000445265 IL13RA1P78552 427 aa15.31■□□□□ 0.04
TCOF1-206ENST00000445265 SPOCK1Q08629 439 aa15.31■□□□□ 0.04
TCOF1-206ENST00000445265 HTR4Q13639 388 aa15.31■□□□□ 0.04
TCOF1-206ENST00000445265 OR7A5Q15622 319 aa15.31■□□□□ 0.04
TCOF1-206ENST00000445265 ZNF454Q8N9F8 522 aa15.31■□□□□ 0.04
TCOF1-206ENST00000445265 NLGN4YQ8NFZ3 816 aaPredicted RBP15.31■□□□□ 0.04
TCOF1-206ENST00000445265 MED30Q96HR3 178 aa15.31■□□□□ 0.04
TCOF1-206ENST00000445265 HTRA3P83110 453 aa15.31■□□□□ 0.04
TCOF1-206ENST00000445265 CLVS2Q5SYC1 327 aa15.31■□□□□ 0.04
TCOF1-206ENST00000445265 PDSS1Q5T2R2 415 aa15.31■□□□□ 0.04
TCOF1-206ENST00000445265 FAM69BQ5VUD6 431 aa15.31■□□□□ 0.04
TCOF1-206ENST00000445265 ZNF565Q8N9K5 539 aa15.31■□□□□ 0.04
TCOF1-206ENST00000445265 SLC37A2Q8TED4 501 aa15.31■□□□□ 0.04
TCOF1-206ENST00000445265 DUSP19Q8WTR2 217 aa15.31■□□□□ 0.04
TCOF1-206ENST00000445265 CDC6Q99741 560 aa15.31■□□□□ 0.04
TCOF1-206ENST00000445265 SRPK3Q9UPE1 567 aa15.31■□□□□ 0.04
TCOF1-206ENST00000445265 OR5K3A6NET4 321 aa15.31■□□□□ 0.04
TCOF1-206ENST00000445265 SLC35D2Q76EJ3 337 aa15.31■□□□□ 0.04
TCOF1-206ENST00000445265 BAHD1Q8TBE0 780 aaPredicted RBP15.31■□□□□ 0.04
TCOF1-206ENST00000445265 NT5CQ8TCD5 201 aa15.31■□□□□ 0.04
TCOF1-206ENST00000445265 SORCS2Q96PQ0 1159 aa15.31■□□□□ 0.04
TCOF1-206ENST00000445265 NAA11Q9BSU3 229 aaPredicted RBP15.31■□□□□ 0.04
TCOF1-206ENST00000445265 CACNA1CQ13936 2221 aa15.31■□□□□ 0.04
TCOF1-206ENST00000445265 A0A0A6YYJ9 748 aa15.31■□□□□ 0.04
TCOF1-206ENST00000445265 H3BML4 177 aa15.31■□□□□ 0.04
TCOF1-206ENST00000445265 H7C417 338 aa15.31■□□□□ 0.04
TCOF1-206ENST00000445265 TNFRSF10AO00220 468 aa15.31■□□□□ 0.04
TCOF1-206ENST00000445265 FFAR1O14842 300 aa15.31■□□□□ 0.04
TCOF1-206ENST00000445265 RBMXL2O75526 392 aaKnown RBP15.31■□□□□ 0.04
TCOF1-206ENST00000445265 OR10A3P58181 314 aa15.31■□□□□ 0.04
TCOF1-206ENST00000445265 RUNX2Q13950 521 aa15.31■□□□□ 0.04
TCOF1-206ENST00000445265 AGERQ15109 404 aa15.31■□□□□ 0.04
TCOF1-206ENST00000445265 GXYLT1Q4G148 440 aa15.31■□□□□ 0.04
TCOF1-206ENST00000445265 LIPNQ5VXI9 398 aa15.31■□□□□ 0.04
TCOF1-206ENST00000445265 PM20D2Q8IYS1 436 aa15.31■□□□□ 0.04
TCOF1-206ENST00000445265 ARL14Q8N4G2 192 aa15.31■□□□□ 0.04
TCOF1-206ENST00000445265 WDR77Q9BQA1 342 aaPredicted RBP15.31■□□□□ 0.04
TCOF1-206ENST00000445265 RAF1P04049 648 aa15.3■□□□□ 0.04
TCOF1-206ENST00000445265 SPI1P17947 270 aa15.3■□□□□ 0.04
TCOF1-206ENST00000445265 HTR2CP28335 458 aa15.3■□□□□ 0.04
TCOF1-206ENST00000445265 SQSTM1Q13501 440 aa15.3■□□□□ 0.04
TCOF1-206ENST00000445265 DEFB133Q30KQ1 61 aa15.3■□□□□ 0.04
TCOF1-206ENST00000445265 SIRT6Q8N6T7 355 aa15.3■□□□□ 0.04
TCOF1-206ENST00000445265 OR14A16Q8NHC5 309 aa15.3■□□□□ 0.04
TCOF1-206ENST00000445265 VDAC3Q9Y277 283 aa15.3■□□□□ 0.04
TCOF1-206ENST00000445265 GABRB1P18505 474 aa15.3■□□□□ 0.04
TCOF1-206ENST00000445265 IFITM3Q01628 133 aa15.3■□□□□ 0.04
TCOF1-206ENST00000445265 TMEM240Q5SV17 173 aa15.3■□□□□ 0.04
TCOF1-206ENST00000445265 FCRL6Q6DN72 434 aa15.3■□□□□ 0.04
TCOF1-206ENST00000445265 AMER3Q8N944 861 aa15.3■□□□□ 0.04
TCOF1-206ENST00000445265 LINC01555Q8NAE3 123 aa15.3■□□□□ 0.04
TCOF1-206ENST00000445265 FOXN4Q96NZ1 517 aa15.3■□□□□ 0.04
TCOF1-206ENST00000445265 OR1F2PQ96R84 312 aa15.3■□□□□ 0.04
TCOF1-206ENST00000445265 SLCO5A1Q9H2Y9 848 aa15.3■□□□□ 0.04
TCOF1-206ENST00000445265 MMACHCQ9Y4U1 282 aa15.3■□□□□ 0.04
TCOF1-206ENST00000445265 CDC14CA4D256 554 aa15.3■□□□□ 0.04
TCOF1-206ENST00000445265 M0R036 132 aa15.3■□□□□ 0.04
TCOF1-206ENST00000445265 FARS2O95363 451 aaKnown RBP15.3■□□□□ 0.04
TCOF1-206ENST00000445265 PLATP00750 562 aa15.3■□□□□ 0.04
TCOF1-206ENST00000445265 UBBP0CG47 229 aa15.3■□□□□ 0.04
TCOF1-206ENST00000445265 UBCP0CG48 685 aaKnown RBP15.3■□□□□ 0.04
TCOF1-206ENST00000445265 POU3F3P20264 500 aaPredicted RBP15.3■□□□□ 0.04
TCOF1-206ENST00000445265 POLR2HP52434 150 aaKnown RBP15.3■□□□□ 0.04
TCOF1-206ENST00000445265 RPS27AP62979 156 aaKnown RBP15.3■□□□□ 0.04
TCOF1-206ENST00000445265 UBA52P62987 128 aaKnown RBP15.3■□□□□ 0.04
TCOF1-206ENST00000445265 ACY1Q03154 408 aa15.3■□□□□ 0.04
TCOF1-206ENST00000445265 SPIN3Q5JUX0 258 aa15.3■□□□□ 0.04
TCOF1-206ENST00000445265 SLC41A2Q96JW4 573 aa15.3■□□□□ 0.04
TCOF1-206ENST00000445265 GSX2Q9BZM3 304 aa15.3■□□□□ 0.04
TCOF1-206ENST00000445265 A0A0D9SG52 128 aa15.29■□□□□ 0.04
TCOF1-206ENST00000445265 AIPO00170 330 aa15.29■□□□□ 0.04
TCOF1-206ENST00000445265 MTRF1O75570 445 aaKnown RBP15.29■□□□□ 0.04
TCOF1-206ENST00000445265 HLA-AP01891 365 aaKnown RBP15.29■□□□□ 0.04
TCOF1-206ENST00000445265 PRKACBP22694 351 aa15.29■□□□□ 0.04
TCOF1-206ENST00000445265 CTHP32929 405 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms